RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 MCIDASD6RGH6 385 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 SULT2B1O00204 365 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 IGHG3P01860 377 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 UQCRC1P31930 480 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 RPL18Q07020 188 aaKnown RBP14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 ST3GAL2Q16842 350 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 SMARCD3Q6STE5 483 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 C5orf46Q6UWT4 87 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 TMPPEQ6ZT21 453 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 MAMDC2Q7Z304 686 aaPredicted RBP14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 NANOGNBQ7Z5D8 188 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 TMEM99Q8N816 258 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 TFAP2CQ92754 450 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 UBE2FQ969M7 185 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 MIB2Q96AX9 1013 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 DTNBP1Q96EV8 351 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 ZNF845Q96IR2 970 aaPredicted RBP14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 RDH12Q96NR8 316 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 UCN2Q96RP3 112 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 TSSK6Q9BXA6 273 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 TBC1D23Q9NUY8 699 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 TAS2R5Q9NYW4 299 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 IL20Q9NYY1 176 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 HDGFL3Q9Y3E1 203 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 PCDHGB5Q9Y5G0 923 aa14.04□□□□□ -0.16
SFSWAP-206ENST00000537582 TLN1Q9Y490 2541 aaKnown RBP14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 ZNF407Q9C0G0 2248 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 ZAR1LA6NP61 321 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 C11orf98E9PRG8 122 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 OR2T1O43869 369 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 CXCL13O43927 109 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 HCN1O60741 890 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 SMNDC1O75940 238 aaKnown RBP eCLIP14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 MT-ATP6P00846 226 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 F13BP05160 661 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 ZNF708P17019 499 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 CAPGP40121 348 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 SLC9A3P48764 834 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 CLK1P49759 484 aaKnown RBP14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 MLLT10P55197 1068 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 ESRRGP62508 458 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 DBPQ10586 325 aaPredicted RBP14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 GINS1Q14691 196 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 RFX4Q33E94 735 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 HBMQ6B0K9 141 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 VASNQ6EMK4 673 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 ACSM5Q6NUN0 579 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 FGD2Q7Z6J4 655 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 CCDC103Q8IW40 242 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 OR5J2Q8NH18 312 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 OR6S1Q8NH40 331 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 OR10D3Q8NH80 312 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 OR2V1Q8NHB1 315 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 TIMP4Q99727 224 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 TAPBPLQ9BX59 468 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 SLC25A18Q9H1K4 315 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 ALKBH4Q9NXW9 302 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 AASSQ9UDR5 926 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 HIF3AQ9Y2N7 669 aa14.03□□□□□ -0.16
SFSWAP-206ENST00000537582 ATRXP46100 2492 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 LOC100130705A0A1B0GUX0 176 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 A6NHS1 94 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 PLPP3O14495 311 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 BCKDKO14874 412 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 SERPINI2O75830 405 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 PPP1R3DO95685 299 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 PMS2P2O95744 297 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 HIST1H2ABP04908 130 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 TSPAN19P0C672 248 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 HLA-DOBP13765 273 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 CDH2P19022 906 aaPredicted RBP14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 EIF1AXP47813 144 aaKnown RBP14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 P2RY4P51582 365 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 NUP107P57740 925 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 PMS2P3Q13401 168 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 INAQ16352 499 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 HIST3H2AQ7L7L0 130 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 CLDN22Q8N7P3 220 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 TEX19Q8NA77 164 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 LRRC75AQ8NAA5 344 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 TEX47Q8TBZ9 253 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 OSTF1Q92882 214 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 HIST1H2ACQ93077 130 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 ASPNQ9BXN1 380 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 MRPL39Q9NYK5 338 aaKnown RBP14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 NDRG4Q9ULP0 352 aaKnown RBP14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 ADAM18Q9Y3Q7 739 aa14.02□□□□□ -0.16
SFSWAP-206ENST00000537582 A0A1B0GTH9 108 aa14.01□□□□□ -0.17
SFSWAP-206ENST00000537582 HTR3EA5X5Y0 456 aa14.01□□□□□ -0.17
SFSWAP-206ENST00000537582 GJE1A6NN92 205 aa14.01□□□□□ -0.17
SFSWAP-206ENST00000537582 MS4A18H0YCH9 400 aa14.01□□□□□ -0.17
SFSWAP-206ENST00000537582 SLC16A6O15403 523 aa14.01□□□□□ -0.17
SFSWAP-206ENST00000537582 FZD7O75084 574 aa14.01□□□□□ -0.17
SFSWAP-206ENST00000537582 ACTL6AO96019 429 aa14.01□□□□□ -0.17
SFSWAP-206ENST00000537582 PLGP00747 810 aaPredicted RBP14.01□□□□□ -0.17
SFSWAP-206ENST00000537582 ADORA3P0DMS8 318 aa14.01□□□□□ -0.17
SFSWAP-206ENST00000537582 ENPP1P22413 925 aa14.01□□□□□ -0.17
SFSWAP-206ENST00000537582 GTF2E2P29084 291 aaKnown RBP14.01□□□□□ -0.17
SFSWAP-206ENST00000537582 CDK5Q00535 292 aa14.01□□□□□ -0.17
SFSWAP-206ENST00000537582 SGCBQ16585 318 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms