RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 BGLAPP02818 100 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 IFNW1P05000 195 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 EPXP11678 715 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 PPP3CBP16298 524 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 COX5AP20674 150 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 GTF2E2P29084 291 aaKnown RBP14.08□□□□□ -0.16
UPF3A-208ENST00000484246 OR1E2P47887 323 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 TAS2R41P59536 307 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 GLYATQ6IB77 296 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 STAC2Q6ZMT1 411 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 DEF8Q6ZN54 512 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 VTCN1Q7Z7D3 282 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 OFCC1Q8IZS5 231 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 FAM162AQ96A26 154 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 TPD52L3Q96J77 140 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 CDRT15Q96T59 188 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 USB1Q9BQ65 265 aaKnown RBP14.08□□□□□ -0.16
UPF3A-208ENST00000484246 C1orf21Q9H246 121 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 C12orf49Q9H741 205 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 DCAF13Q9NV06 445 aaKnown RBP14.08□□□□□ -0.16
UPF3A-208ENST00000484246 MRPL39Q9NYK5 338 aaKnown RBP14.08□□□□□ -0.16
UPF3A-208ENST00000484246 B3GAT1Q9P2W7 334 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 MALT1Q9UDY8 824 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 A4GNTQ9UNA3 340 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 SAMD4AQ9UPU9 718 aaKnown RBP14.08□□□□□ -0.16
UPF3A-208ENST00000484246 GPR52Q9Y2T5 361 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 NOSIPQ9Y314 301 aaKnown RBP14.08□□□□□ -0.16
UPF3A-208ENST00000484246 SNX13Q9Y5W8 968 aa14.08□□□□□ -0.16
UPF3A-208ENST00000484246 HTR3EA5X5Y0 456 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 B2RBV5 119 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 M0R082 166 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 NCK1P16333 377 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 GRPRP30550 384 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 NTF4P34130 210 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 MXRA7P84157 204 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 H1FNTQ75WM6 255 aaPredicted RBP14.07□□□□□ -0.16
UPF3A-208ENST00000484246 RNF148Q8N7C7 305 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 ZIC4Q8N9L1 334 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 ZNF417Q8TAU3 575 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 APH1AQ96BI3 265 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 HSH2DQ96JZ2 352 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 ZNF587Q96SQ5 575 aaPredicted RBP14.07□□□□□ -0.16
UPF3A-208ENST00000484246 HDHD5Q9BXW7 423 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 AMBRA1Q9C0C7 1298 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 MUC13Q9H3R2 512 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 FKRPQ9H9S5 495 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 MCCC2Q9HCC0 563 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 PARPBPQ9NWS1 579 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 NDRG3Q9UGV2 375 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 EGFL7Q9UHF1 273 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 RIMS3Q9UJD0 308 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 PRPF19Q9UMS4 504 aaKnown RBP14.07□□□□□ -0.16
UPF3A-208ENST00000484246 RCE1Q9Y256 329 aa14.07□□□□□ -0.16
UPF3A-208ENST00000484246 SH3D21A4FU49 640 aa14.06□□□□□ -0.16
UPF3A-208ENST00000484246 ARPC2O15144 300 aa14.06□□□□□ -0.16
UPF3A-208ENST00000484246 GMNNO75496 209 aa14.06□□□□□ -0.16
UPF3A-208ENST00000484246 PRSS23O95084 383 aa14.06□□□□□ -0.16
UPF3A-208ENST00000484246 ZNF682O95780 498 aa14.06□□□□□ -0.16
UPF3A-208ENST00000484246 EDNRAP25101 427 aa14.06□□□□□ -0.16
UPF3A-208ENST00000484246 LTBQ06643 244 aa14.06□□□□□ -0.16
UPF3A-208ENST00000484246 ST3GAL3Q11203 375 aa14.06□□□□□ -0.16
UPF3A-208ENST00000484246 PIN1Q13526 163 aaPredicted RBP14.06□□□□□ -0.16
UPF3A-208ENST00000484246 ZNF74Q16587 644 aa14.06□□□□□ -0.16
UPF3A-208ENST00000484246 FBXW9Q5XUX1 488 aa14.06□□□□□ -0.16
UPF3A-208ENST00000484246 TTC33Q6PID6 262 aaPredicted RBP14.06□□□□□ -0.16
UPF3A-208ENST00000484246 CREB3L2Q70SY1 520 aa14.06□□□□□ -0.16
UPF3A-208ENST00000484246 P3H2Q8IVL5 708 aa14.06□□□□□ -0.16
UPF3A-208ENST00000484246 FAM156AQ8NDB6 213 aa14.06□□□□□ -0.16
UPF3A-208ENST00000484246 HS6ST2Q96MM7 605 aa14.06□□□□□ -0.16
UPF3A-208ENST00000484246 MOGAT1Q96PD6 335 aa14.06□□□□□ -0.16
UPF3A-208ENST00000484246 A6NNC1 897 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 PDLIM1O00151 329 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 MRPL33O75394 65 aaKnown RBP14.05□□□□□ -0.16
UPF3A-208ENST00000484246 SEMG1P04279 462 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 IFNA8P32881 189 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 TLE4Q04727 773 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 ITGADQ13349 1161 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 EXOC3L2Q2M3D2 409 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 SFRP5Q5T4F7 317 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 TMEM225Q6GV28 225 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 TSEN54Q7Z6J9 526 aaKnown RBP14.05□□□□□ -0.16
UPF3A-208ENST00000484246 EPHX4Q8IUS5 362 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 ZNF100Q8IYN0 542 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 STEAP2Q8NFT2 490 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 LINC01560Q8TB33 94 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 RNF217Q8TC41 542 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 LIPHQ8WWY8 451 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 SLC25A36Q96CQ1 311 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 OXGR1Q96P68 337 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 ZNF385AQ96PM9 386 aaKnown RBP14.05□□□□□ -0.16
UPF3A-208ENST00000484246 ASPNQ9BXN1 380 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 KLHL4Q9C0H6 718 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 ANKRD19PQ9H560 264 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 MEPEQ9NQ76 525 aaPredicted RBP14.05□□□□□ -0.16
UPF3A-208ENST00000484246 MAN2C1Q9NTJ4 1040 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 PRSS50Q9UI38 385 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 ZNF229Q9UJW7 825 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 ENPP4Q9Y6X5 453 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 NOTCH2Q04721 2471 aa14.05□□□□□ -0.16
UPF3A-208ENST00000484246 OR6C65A6NJZ3 312 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms