RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 SPRYD4Q8WW59 207 aaPredicted RBP16.3■□□□□ 0.2
VARS2-206ENST00000473916 CDC6Q99741 560 aa16.3■□□□□ 0.2
VARS2-206ENST00000473916 ARHGAP9Q9BRR9 750 aa16.3■□□□□ 0.2
VARS2-206ENST00000473916 TTTY10Q9BZA0 68 aa16.3■□□□□ 0.2
VARS2-206ENST00000473916 ASB6Q9NWX5 421 aa16.3■□□□□ 0.2
VARS2-206ENST00000473916 FBXL2Q9UKC9 423 aa16.3■□□□□ 0.2
VARS2-206ENST00000473916 SLC22A31A6NKX4 558 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 FAM171A2A8MVW0 826 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 C11orf98E9PRG8 122 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 H7C1C5 153 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 ARPC3O15145 178 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 CRYBB2P43320 205 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 LCN6P62502 163 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 Q0VFX4 171 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 C1orf140Q5VVS0 124 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 NDUFAF7Q7L592 441 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 PSD4Q8NDX1 1056 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 ATP6V1C2Q8NEY4 427 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 M1APQ8TC57 530 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 TSPAN32Q96QS1 320 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 CDCP1Q9H5V8 836 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 RERGLQ9H628 205 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 FKRPQ9H9S5 495 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 EXOSC4Q9NPD3 245 aaKnown RBP16.29■□□□□ 0.2
VARS2-206ENST00000473916 TAS2R5Q9NYW4 299 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 ZNF229Q9UJW7 825 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 CD14P08571 375 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 INHBBP09529 407 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 TSPAN19P0C672 248 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 CPEP16870 476 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 RPS25P62851 125 aaKnown RBP16.29■□□□□ 0.2
VARS2-206ENST00000473916 LEG1Q6P5S2 330 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 ARL5BQ96KC2 179 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 TSSK2Q96PF2 358 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 ZPBPQ9BS86 351 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 SLIRPQ9GZT3 109 aaKnown RBP16.29■□□□□ 0.2
VARS2-206ENST00000473916 FAM86C1Q9NVL1 165 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 KLHL21Q9UJP4 597 aa16.29■□□□□ 0.2
VARS2-206ENST00000473916 A8MVM7 634 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 SBK2P0C263 348 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 TCF15Q12870 199 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 ZNF468Q5VIY5 522 aaPredicted RBP16.28■□□□□ 0.2
VARS2-206ENST00000473916 ZNF322Q6U7Q0 402 aaPredicted RBP16.28■□□□□ 0.2
VARS2-206ENST00000473916 SSX6Q7RTT6 188 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 ACBD7Q8N6N7 88 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 OR5M1Q8NGP8 315 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 ALG8Q9BVK2 526 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 MRPS18BQ9Y676 258 aaKnown RBP16.28■□□□□ 0.2
VARS2-206ENST00000473916 CCDC187A0A096LP49 1063 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 HTR3EA5X5Y0 456 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 G3V3Y1 287 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 EFNA2O43921 213 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 PLGP00747 810 aaPredicted RBP16.28■□□□□ 0.2
VARS2-206ENST00000473916 TFP02787 698 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 HIST1H2ABP04908 130 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 OPRL1P41146 370 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 NAA10P41227 235 aaPredicted RBP16.28■□□□□ 0.2
VARS2-206ENST00000473916 SERPINB10P48595 397 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 IL10RAQ13651 578 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 TRIP6Q15654 476 aaKnown RBP16.28■□□□□ 0.2
VARS2-206ENST00000473916 MESTQ5EB52 335 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 SLC6A19Q695T7 634 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 HIST3H2AQ7L7L0 130 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 KLHL36Q8N4N3 616 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 SMPDL3BQ92485 455 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 HIST1H2ACQ93077 130 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 TM9SF2Q99805 663 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 JAM3Q9BX67 310 aa16.28■□□□□ 0.2
VARS2-206ENST00000473916 RPRD1BQ9NQG5 326 aaKnown RBP16.28■□□□□ 0.2
VARS2-206ENST00000473916 FARSAQ9Y285 508 aaKnown RBP16.28■□□□□ 0.2
VARS2-206ENST00000473916 FREM3P0C091 2139 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 CNTRLQ7Z7A1 2325 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 DAPL1A0PJW8 107 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 MAGEB4O15481 346 aaPredicted RBP16.27■□□□□ 0.2
VARS2-206ENST00000473916 OPN1LWP04000 364 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 CCL3P10147 92 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 SPI1P17947 270 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 TGM1P22735 817 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 GRPRP30550 384 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 PYCR1P32322 319 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 BMXP51813 675 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 ZNF85Q03923 595 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 C19orf57Q0VDD7 668 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 FAM69AQ5T7M9 428 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 USP43Q70EL4 1123 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 ADCK1Q86TW2 530 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 KLBQ86Z14 1044 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 WDSUB1Q8N9V3 476 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 POC1BQ8TC44 478 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 TMEM234Q8WY98 164 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 ST8SIA1Q92185 356 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 DCLRE1CQ96SD1 692 aaKnown RBP16.27■□□□□ 0.2
VARS2-206ENST00000473916 NMNAT2Q9BZQ4 307 aa16.27■□□□□ 0.2
VARS2-206ENST00000473916 CCDC86Q9H6F5 360 aaKnown RBP16.27■□□□□ 0.2
VARS2-206ENST00000473916 SF3B6Q9Y3B4 125 aaKnown RBP16.27■□□□□ 0.2
VARS2-206ENST00000473916 SIRT4Q9Y6E7 314 aaPredicted RBP16.27■□□□□ 0.2
VARS2-206ENST00000473916 A0A1W2PQ72 361 aa16.26■□□□□ 0.19
VARS2-206ENST00000473916 A0A1W2PQL4 384 aaPredicted RBP16.26■□□□□ 0.19
VARS2-206ENST00000473916 DCTN6O00399 190 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms