RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 NPIPB7O75200 414 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 IL1AP01583 271 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 UMODP07911 640 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 CD63P08962 238 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 CELP19835 753 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 DIO1P49895 249 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 RORCP51449 518 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 RAB15P59190 212 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 DCAF12Q5T6F0 453 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 ZFP41Q8N8Y5 198 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 OR2Y1Q8NGV0 311 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 Q96M85 177 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 CRNNQ9UBG3 495 aaPredicted RBP22.86■■□□□ 1.25
SHOX2-201ENST00000389589 TMEM72A0PK05 275 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 OR6C68A6NDL8 312 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 KLF7O75840 302 aaPredicted RBP22.86■■□□□ 1.25
SHOX2-201ENST00000389589 OR2J2O76002 312 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 HLA-DPB1P04440 258 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 FBXO45P0C2W1 286 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 EXT1Q16394 746 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 BTBD16Q32M84 506 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 FAM69AQ5T7M9 428 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 FAM69BQ5VUD6 431 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 GPR139Q6DWJ6 353 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 C22orf42Q6IC83 251 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 LYPD8Q6UX82 237 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 FNDC8Q8TC99 324 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 MED18Q9BUE0 208 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 STRADBQ9C0K7 418 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 SDHAF3Q9NRP4 125 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 YARS2Q9Y2Z4 477 aaKnown RBP22.86■■□□□ 1.25
SHOX2-201ENST00000389589 SPEGQ15772 3267 aa22.86■■□□□ 1.25
SHOX2-201ENST00000389589 IGHV1-45A0A0A0MS14 117 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 OR2T7P0C7T2 308 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 SPI1P17947 270 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 GALP22466 123 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 MSX1P28360 303 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 SLC25A1P53007 311 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 LEG1Q6P5S2 330 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 GALNT6Q8NCL4 622 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 OR2T27Q8NH04 317 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 ZMYND19Q96E35 227 aaPredicted RBP22.85■■□□□ 1.25
SHOX2-201ENST00000389589 TM9SF2Q99805 663 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 KLRF1Q9NZS2 232 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 GRHPRQ9UBQ7 328 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 TAF4O00268 1085 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 GAAP10253 952 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 ZNF12P17014 697 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 DLX5P56178 289 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 TAS2R43P59537 309 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 FABP5Q01469 135 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 ZNF85Q03923 595 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.85■■□□□ 1.25
SHOX2-201ENST00000389589 C1orf140Q5VVS0 124 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 LSM14AQ8ND56 463 aaKnown RBP22.85■■□□□ 1.25
SHOX2-201ENST00000389589 PTDSS2Q9BVG9 487 aa22.85■■□□□ 1.25
SHOX2-201ENST00000389589 CD53P19397 219 aa22.84■■□□□ 1.25
SHOX2-201ENST00000389589 DBPQ10586 325 aaPredicted RBP22.84■■□□□ 1.25
SHOX2-201ENST00000389589 NTRK2Q16620 822 aa22.84■■□□□ 1.25
SHOX2-201ENST00000389589 ZPBPQ9BS86 351 aa22.84■■□□□ 1.25
SHOX2-201ENST00000389589 LOXL2Q9Y4K0 774 aa22.84■■□□□ 1.25
SHOX2-201ENST00000389589 CPAMD8Q8IZJ3 1885 aa22.84■■□□□ 1.25
SHOX2-201ENST00000389589 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.83■■□□□ 1.25
SHOX2-201ENST00000389589 A0A1W2PQL4 384 aaPredicted RBP22.83■■□□□ 1.25
SHOX2-201ENST00000389589 OR2T1O43869 369 aa22.83■■□□□ 1.25
SHOX2-201ENST00000389589 CDRT1O95170 752 aa22.83■■□□□ 1.25
SHOX2-201ENST00000389589 F13BP05160 661 aa22.83■■□□□ 1.25
SHOX2-201ENST00000389589 PRKCAP17252 672 aa22.83■■□□□ 1.25
SHOX2-201ENST00000389589 CDKN2AP42771 156 aaKnown RBP22.83■■□□□ 1.25
SHOX2-201ENST00000389589 SGCBQ16585 318 aa22.83■■□□□ 1.25
SHOX2-201ENST00000389589 OR5J2Q8NH18 312 aa22.83■■□□□ 1.25
SHOX2-201ENST00000389589 OR6S1Q8NH40 331 aa22.83■■□□□ 1.25
SHOX2-201ENST00000389589 IMMP1LQ96LU5 166 aa22.83■■□□□ 1.25
SHOX2-201ENST00000389589 RASL10BQ96S79 203 aa22.83■■□□□ 1.25
SHOX2-201ENST00000389589 GALNT9Q9HCQ5 603 aa22.83■■□□□ 1.25
SHOX2-201ENST00000389589 SNTG1Q9NSN8 517 aa22.83■■□□□ 1.25
SHOX2-201ENST00000389589 MOKQ9UQ07 419 aa22.83■■□□□ 1.25
SHOX2-201ENST00000389589 B3GALT1Q9Y5Z6 326 aa22.83■■□□□ 1.25
SHOX2-201ENST00000389589 GLCEO94923 617 aa22.83■■□□□ 1.24
SHOX2-201ENST00000389589 AHSA1O95433 338 aa22.83■■□□□ 1.24
SHOX2-201ENST00000389589 IGHEP01854 428 aa22.83■■□□□ 1.24
SHOX2-201ENST00000389589 CD40LGP29965 261 aa22.83■■□□□ 1.24
SHOX2-201ENST00000389589 APOBEC1P41238 236 aaKnown RBP22.83■■□□□ 1.24
SHOX2-201ENST00000389589 FOLR3P41439 243 aa22.83■■□□□ 1.24
SHOX2-201ENST00000389589 RUNX1T1Q06455 604 aa22.83■■□□□ 1.24
SHOX2-201ENST00000389589 C1QL3Q5VWW1 255 aa22.83■■□□□ 1.24
SHOX2-201ENST00000389589 OR5M10Q6IEU7 315 aa22.83■■□□□ 1.24
SHOX2-201ENST00000389589 ARIH2OSQ8N7S6 290 aa22.83■■□□□ 1.24
SHOX2-201ENST00000389589 M1APQ8TC57 530 aa22.83■■□□□ 1.24
SHOX2-201ENST00000389589 SPACA9Q96E40 222 aaPredicted RBP22.83■■□□□ 1.24
SHOX2-201ENST00000389589 METTL7AQ9H8H3 244 aa22.83■■□□□ 1.24
SHOX2-201ENST00000389589 PPP4R1LQ9P1A2 415 aa22.83■■□□□ 1.24
SHOX2-201ENST00000389589 KMT2EQ8IZD2 1858 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 IGLV3-32A0A0A0MS00 114 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 TEX51A0A1B0GUA7 166 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 COX6A1P12074 109 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 PPP5CP53041 499 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 ACTA2P62736 377 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 ACTG2P63267 376 aa22.82■■□□□ 1.24
SHOX2-201ENST00000389589 ZNF45Q02386 682 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms