RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 NMNAT3Q96T66 252 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 CNN2Q99439 309 aaKnown RBP16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ULBP3Q9BZM4 244 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 ISG20L2Q9H9L3 353 aaKnown RBP16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TRIM36Q9NQ86 728 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TOR4AQ9NXH8 423 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SLC39A1Q9NY26 324 aa16.34■□□□□ 0.21
HLA-DQB1-201ENST00000374943 SPEGQ15772 3267 aa16.33■□□□□ 0.21
HLA-DQB1-201ENST00000374943 TEX13CA0A0J9YWL9 993 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 TMEM72A0PK05 275 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 OR6C68A6NDL8 312 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 A8MVM7 634 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 GMFGO60234 142 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SUSD5O60279 629 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 HLA-DPB1P04440 258 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 HIST1H2ABP04908 130 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 UMODP07911 640 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 MRPL3P09001 348 aaKnown RBP16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 FBXO45P0C2W1 286 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SPI1P17947 270 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 CD53P19397 219 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 CD40LGP29965 261 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 S100A5P33763 92 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 ETV6P41212 452 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 RPS5P46782 204 aaKnown RBP16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 RORCP51449 518 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 RAB15P59190 212 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 CTXN1P60606 82 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 FABP5Q01469 135 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 PON3Q15166 354 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 CRTC2Q53ET0 693 aaPredicted RBP16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 GPR139Q6DWJ6 353 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 C22orf42Q6IC83 251 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 FAM199XQ6PEV8 388 aaPredicted RBP16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 HIST3H2AQ7L7L0 130 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 MAMDC2Q7Z304 686 aaPredicted RBP16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 BTLAQ7Z6A9 289 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 ADGRG3Q86Y34 549 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 ZFP41Q8N8Y5 198 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 LSM14AQ8ND56 463 aaKnown RBP16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 PRSS33Q8NF86 280 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 OR6S1Q8NH40 331 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 HIST1H2ACQ93077 130 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 TMEM203Q969S6 136 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 Q96M85 177 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 TBX5Q99593 518 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 CMKLR1Q99788 373 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 TM9SF2Q99805 663 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 NUAK2Q9H093 628 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 ZNF700Q9H0M5 742 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 AKAP7Q9P0M2 348 aaPredicted RBP16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 CRNNQ9UBG3 495 aaPredicted RBP16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 GSTK1Q9Y2Q3 226 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 PCDHGB7Q9Y5F8 929 aa16.33■□□□□ 0.2
HLA-DQB1-201ENST00000374943 FRYLO94915 3013 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 IGLV3-32A0A0A0MS00 114 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 IGHV1-45A0A0A0MS14 117 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 PNMA8CA0A1B0GUJ8 204 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 ETV2O00321 342 aaPredicted RBP16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 KLF7O75840 302 aaPredicted RBP16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 DKK1O94907 266 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 OR2T7P0C7T2 308 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 CELP19835 753 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 TAS2R43P59537 309 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 TBC1D25Q3MII6 688 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 FAM69AQ5T7M9 428 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 JAZF1Q86VZ6 243 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 EXD3Q8N9H8 876 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 OR2T27Q8NH04 317 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SLC25A46Q96AG3 418 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 ZMYND19Q96E35 227 aaPredicted RBP16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 DEFB126Q9BYW3 111 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 BARHL1Q9BZE3 327 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 POLHQ9Y253 713 aa16.32■□□□□ 0.2
HLA-DQB1-201ENST00000374943 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 A0A1W2PQ72 361 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 GLCEO94923 617 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 TFP02787 698 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 MSX1P28360 303 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 CDKN2AP42771 156 aaKnown RBP16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 PPP5CP53041 499 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 DBPQ10586 325 aaPredicted RBP16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 EXT1Q16394 746 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SGCBQ16585 318 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 NTRK2Q16620 822 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 LEG1Q6P5S2 330 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 Q6ZNX1 250 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 OR2Y1Q8NGV0 311 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 ZPLD1Q8TCW7 415 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 IMMP1LQ96LU5 166 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 ZMIZ1Q9ULJ6 1067 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 PTRH2Q9Y3E5 179 aaKnown RBP16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 DMDP11532 3685 aa16.31■□□□□ 0.2
HLA-DQB1-201ENST00000374943 IQCMA0A1B0GVH7 501 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 A0A1W2PQL4 384 aaPredicted RBP16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 RNF13O43567 381 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 SULT1C4O75897 302 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 CDRT1O95170 752 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 WISP1O95388 367 aa16.3■□□□□ 0.2
HLA-DQB1-201ENST00000374943 COX6A1P12074 109 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms