RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 GbaP17439 515 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 ArntP53762 791 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Nup43P59235 380 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Tra2bP62996 288 aaKnown RBP13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Mep1bQ61847 704 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 RgmaQ6PCX7 454 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Med16Q6PGF3 828 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Peli2Q8BST6 419 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Scamp1Q8K021 338 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr811Q8VFI1 319 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Tmprss11dQ8VHK8 417 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Rab28Q99KL7 221 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Pdzd3Q99MJ6 498 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Hint3Q9CPS6 165 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olig2Q9EQW6 323 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Slc22a21Q9WTN6 564 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr1130A0A1L1SQT2 314 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr1129A2AV41 314 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr891E9Q843 316 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 HgdO09173 445 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Mllt10O54826 1068 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Hsd11b1P50172 292 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 TCAIMQ66JZ4 499 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Shc4Q6S5L9 626 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr320Q7TRZ4 306 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Fam212bQ80VY2 300 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Osbpl11Q8CI95 751 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr1501Q8VFQ3 315 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Q9CQT6 229 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Slc9a3r2Q9JHL1 337 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr1291-ps1A0A286YE47 326 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 9230113P08RikD3YWX3 137 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Daw1D3Z7A5 415 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr557E9Q550 322 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Arhgap40E9Q6X9 672 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Alox5apP30355 161 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Sox1P53783 391 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 RelbQ04863 558 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Cntnap5bQ0V8T8 1292 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Hif3aQ0VBL6 662 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr1031Q7TR87 336 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Wdr48Q8BH57 676 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Rnf38Q8BI21 518 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Rcc2Q8BK67 520 aaKnown RBP13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Reep4Q8K072 257 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr1388Q8VFA3 311 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 HnrnpllQ921F4 591 aaKnown RBP13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 NsdhlQ9R1J0 362 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr1164A2AVT5 326 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr221B2RVX8 311 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr746E9Q840 314 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Vmn2r82G3UWA2 865 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Elk1P41969 429 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Zfp987Q32P14 633 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Slc35g3Q5F297 340 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr328Q5NCD3 310 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Commd3Q63829 195 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Cd300lfQ6SJQ7 337 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr1196Q7TR14 314 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr1162Q7TR28 314 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Fbxo45Q8K3B1 286 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 SmoxQ99K82 555 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Ctrb1Q9CR35 263 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Jam3Q9D8B7 310 aa13.73□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Chrm4P32211 479 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Rasd2P63032 266 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Zp3rQ60736 579 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Gpr68Q8BFQ3 365 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Ska3Q8C263 411 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Tmem150cQ8C8S3 249 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Vmn1r59Q8R2B9 310 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Mrps18bQ99N84 254 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Mettl18Q9CZ09 362 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Cthrc1Q9D1D6 245 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Cav2Q9WVC3 162 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Olfr608E9Q564 316 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Gm15130F6PYN5 206 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Gm9125P0DMR6 365 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Il10P18893 178 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Pou3f4P62515 361 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 PrtgQ2EY15 1191 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Spryd7Q3TFQ1 196 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Slc35a1Q61420 336 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 PtprcapQ64697 197 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Cfap20Q8BTU1 193 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Lypd4Q8BVP6 246 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Fam78aQ8C552 283 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Hmgcll1Q8JZS7 343 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Erlec1Q8VEH8 483 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Zdhhc4Q9D6H5 343 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Dmrta2A2A9A2 531 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Dmrtb1A2A9I7 359 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Ppp1r3dA2AJW4 279 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 H60cB1B213 197 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Pcdh1F7BJK1 1077 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Prkar1bP12849 381 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Gmeb2P58929 530 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Cuzd1P70412 606 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Mdga1Q0PMG2 940 aa13.72□□□□□ -0.21
Pcdha1-201ENSMUST00000070797 Cdt1Q8R4E9 557 aa13.72□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms