RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 1700025B11RikA0A087WNZ6 93 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Igkv6-29A0A0G2JEI6 115 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Gm14418A2ARR6 358 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Gm14322A2AW66 358 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Gm14862B1AV28 81 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Zfp989H3BLB0 661 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Pcdh12O55134 1180 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Mid1O70583 680 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Papss2O88428 621 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Cacng2O88602 323 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Resp18P47939 175 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Ucp3P56501 308 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Foxred1Q3TQB2 487 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Gm10750Q3V0I0 133 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Fam46cQ5SSF7 391 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 HpQ61646 347 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 HlxQ61670 476 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Creg2Q8BGC9 288 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Lkaaear1Q8BIG2 198 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Ap5m1Q8BJ63 490 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 GatcQ8CBY0 155 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Lyrm4Q8K215 91 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Grhl2Q8K5C0 625 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Pafah2Q8VDG7 390 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 4933436I01RikQ9D3T1 429 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Mfsd2aQ9DA75 534 aa13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Brix1Q9DCA5 353 aaKnown RBP13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 Upf1Q9EPU0 1124 aaKnown RBP13.42□□□□□ -0.26
Msx3-201ENSMUST00000055353 DmdP11531 3678 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Slc37a4A0A1L1SUI3 450 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Btbd2E9PUS2 523 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Esp34G3UXG0 151 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Prl4a1O35256 227 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 BckdkO55028 412 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 P03976 113 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 RetP35546 1115 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Xlr4cQ3TKR2 215 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Gtpbp2Q3UJK4 602 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Nhlrc4Q3UP44 136 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Fzd8Q61091 685 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Adh7Q64437 374 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Emc1Q8C7X2 997 aaKnown RBP13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Dlgap5Q8K4R9 808 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Odf4Q8VI88 290 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Hrh4Q91ZY2 391 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Sucnr1Q99MT6 317 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Zmynd19Q9CQG3 227 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Dmac2Q9D7K5 258 aaKnown RBP13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 P2ry14Q9ESG6 338 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Sectm1bQ9JL59 212 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Kntc1Q8C3Y4 2207 aa13.41□□□□□ -0.26
Msx3-201ENSMUST00000055353 Igkv12-38A0A0G2JEI7 115 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Olfr1095A3KPP7 308 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Scgb2b3D2XZ38 112 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Gm43720E0CXM8 267 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Ms4a7E9Q9V5 267 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Zfp141G3UY09 685 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Creg1O88668 220 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Mup3P04939 184 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Ppp2cbP62715 309 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Fgf17P63075 216 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Ppp2caP63330 309 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Serpina3mQ03734 418 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Nkx6-3Q3UHX8 262 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Pak6Q3ULB5 682 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Slc25a45Q8CFJ7 288 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Slc16a14Q8K1C7 512 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Ubqln1Q8R317 582 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Glb1lQ8VC60 646 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Gid4Q9CPY6 217 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 EcdQ9CS74 641 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Popdc3Q9ES81 291 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Xlr4bQ9JJQ7 215 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Scn2aA0A0J9YTW6 2006 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Tas2r122D3YU55 309 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Zfp619G3X9T2 1161 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Gm7970L7N271 213 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Gm7980L7N471 213 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 PhyhO35386 338 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Fcer1aP20489 250 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Sstr2P30875 369 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Rfx3P48381 749 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 MazP56671 477 aaKnown RBP13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Tbx6P70327 436 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Serpine2Q07235 397 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Fads2p1Q0VAX3 487 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 ptchd1Q14B62 888 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Foxd3Q61060 465 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Flrt3Q8BGT1 649 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Q8BHG2 160 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Cpne1Q8C166 536 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Q8R2K8 148 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Rhbdl1Q8VC82 373 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Brinp1Q920P3 760 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Slc25a36Q922G0 311 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Pfn4Q9D6I3 129 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Alg5Q9DB25 324 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Slc9a3r2Q9JHL1 337 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 Cnot9Q9JKY0 299 aa13.4□□□□□ -0.26
Msx3-201ENSMUST00000055353 RlimQ9WTV7 600 aa13.4□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms