RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 METTL12A8MUP2 240 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SCO2O43819 266 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 NTF3P20783 257 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 AKT2P31751 481 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 MRPS34P82930 218 aaKnown RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ARSIQ5FYB1 569 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 OR56B1Q8NGI3 324 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 OR2T4Q8NH00 348 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 TOMM40LQ969M1 308 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 GIMAP5Q96F15 307 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SNX22Q96L94 193 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 TRIB3Q96RU7 358 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 DCAF16Q9NXF7 216 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 PLEKHB1Q9UF11 243 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 RPH3ALQ9UNE2 315 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 V9GY05 133 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 IGFALSP35858 605 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 HSF1Q00613 529 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 MLF2Q15773 248 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 MOGAT2Q3SYC2 334 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 OR2AP1Q8NGE2 309 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 RGMAQ96B86 450 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SLC2A13Q96QE2 648 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SIRT7Q9NRC8 400 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 AIFM1O95831 613 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 H2BFMP0C1H6 154 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 CALCBP10092 127 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 DMRTC1Q5HYR2 192 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 HBMQ6B0K9 141 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 OARD1Q9Y530 152 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 A0A1W2PNV4 684 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 AP4M1O00189 453 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 GEMIN2O14893 280 aaKnown RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 APOA2P02652 100 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 NAGAP17050 411 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 ARL3P36405 182 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 OOSP2Q86WS3 158 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 CPXM2Q8N436 756 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 BCO2Q9BYV7 579 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 TAF9BQ9HBM6 251 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 NDUFB11Q9NX14 153 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 ACAD8Q9UKU7 415 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SPTA1P02549 2419 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF593O00488 134 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 HSD3B2P26439 372 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 MINDY4Q4G0A6 757 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 TMEM182Q6ZP80 229 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 CLDN22Q8N7P3 220 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 MIB2Q96AX9 1013 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 M0R143 59 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SOX1O00570 391 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 KLK3P07288 261 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 ACP2P11117 423 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 BAMBIQ13145 260 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 HMGN3Q15651 99 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 RAB41Q5JT25 222 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 FAM160A2Q8N612 972 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 KLHL15Q96M94 604 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 RNF181Q9P0P0 153 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 PCDHB10Q9UN67 800 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 CAMK2AQ9UQM7 478 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 APC2O95996 2303 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF724A8MTY0 619 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 C1GALT1C1LP0DN25 315 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SDC1P18827 310 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 CSNK1DP48730 415 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 PKIAP61925 76 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 OR5I1Q13606 314 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF239Q16600 458 aaKnown RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 WDR88Q6ZMY6 472 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 MYPOPQ86VE0 399 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 LDLRAD3Q86YD5 345 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 UEVLDQ8IX04 471 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 FNDC9Q8TBE3 224 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 THRSPQ92748 146 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SDHAF3Q9NRP4 125 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 EPHA6Q9UF33 1036 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 CGGBP1Q9UFW8 167 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 MYOM1P52179 1685 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 FAM155AB1AL88 458 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SBK3P0C264 359 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 ATP1B2P14415 290 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 HBA1P69905 142 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 BPIFB2Q8N4F0 458 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 OR11H4Q8NGC9 324 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 NUBPLQ8TB37 319 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 RNF141Q8WVD5 230 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 SORCS2Q96PQ0 1159 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 PDCD1LG2Q9BQ51 273 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 CERS4Q9HA82 394 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 CRTAC1Q9NQ79 661 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 C10orf71Q711Q0 1435 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 RAB27BO00194 218 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 HNRNPKP61978 463 aaKnown RBP eCLIP4.69□□□□□ -1.661e-6■■■■□ 23.8
VPS13D-214ENST00000620676 SSX1Q16384 188 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 OR51T1Q8NGJ9 327 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 POLDIP3Q9BY77 421 aaKnown RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 MKKSQ9NPJ1 570 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-214ENST00000620676 GPR173Q9NS66 373 aa4.69□□□□□ -1.66
VPS13D-214ENST00000620676 MED9Q9NWA0 146 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms