RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 SPINK14Q6IE38 97 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 PYHIN1Q6K0P9 492 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 FAHD2BQ6P2I3 314 aaPredicted RBP3.65□□□□□ -1.83
LIMA1-205ENST00000550592 VITQ6UXI7 678 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 MCOLN2Q8IZK6 566 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 DENND6BQ8NEG7 585 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 IPMKQ8NFU5 416 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 TOP1MTQ969P6 601 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 FAHD2AQ96GK7 314 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 CITED1Q99966 193 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 PAXXQ9BUH6 204 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 ALG12Q9BV10 488 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 POLR1EQ9GZS1 481 aaKnown RBP3.65□□□□□ -1.83
LIMA1-205ENST00000550592 TMEM117Q9H0C3 514 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 GLT8D2Q9H1C3 349 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 PPDPFQ9H3Y8 114 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 IKZF5Q9H5V7 419 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 WRAP73Q9P2S5 460 aaPredicted RBP3.65□□□□□ -1.83
LIMA1-205ENST00000550592 Q9UF83 564 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 Q9Y3F1 56 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 NEUROG3Q9Y4Z2 214 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 ATAD5Q96QE3 1844 aa3.65□□□□□ -1.83
LIMA1-205ENST00000550592 A0A1W2PNV4 684 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 K7ENP7 123 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 PHOX2AO14813 284 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 ADCY5O95622 1261 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 F10P00742 488 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 IGKV5-2P06315 115 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 PGCP20142 388 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 CALRP27797 417 aaKnown RBP3.64□□□□□ -1.83
LIMA1-205ENST00000550592 IFNAR2P48551 515 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 RGS4P49798 205 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 MEOX2P50222 304 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 LIM2P55344 173 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 KRTAP10-6P60371 365 aaPredicted RBP3.64□□□□□ -1.83
LIMA1-205ENST00000550592 RPL32P62910 135 aaKnown RBP3.64□□□□□ -1.83
LIMA1-205ENST00000550592 EWSR1Q01844 656 aaKnown RBP eCLIP3.64□□□□□ -1.83
LIMA1-205ENST00000550592 GPNMBQ14956 572 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 SYPL1Q16563 259 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 NDUFA9Q16795 377 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 GSG1Q2KHT4 349 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 APTXQ7Z2E3 356 aaKnown RBP3.64□□□□□ -1.83
LIMA1-205ENST00000550592 LINC01561Q8N1V8 128 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 LRRC43Q8N309 656 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 GPD1LQ8N335 351 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 C15orf54Q8N8G6 183 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 MRAPQ8TCY5 172 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 TRUB1Q8WWH5 349 aaKnown RBP3.64□□□□□ -1.83
LIMA1-205ENST00000550592 SENP8Q96LD8 212 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 TXN2Q99757 166 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 SLC6A7Q99884 636 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 OMDQ99983 421 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 TSSK1BQ9BXA7 367 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 MIEF1Q9NQG6 463 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 GNG12Q9UBI6 72 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 SNX6Q9UNH7 406 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 MRPS7Q9Y2R9 242 aaKnown RBP3.64□□□□□ -1.83
LIMA1-205ENST00000550592 WDR45Q9Y484 360 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 DDX49Q9Y6V7 483 aaKnown RBP3.64□□□□□ -1.83
LIMA1-205ENST00000550592 NLRC5Q86WI3 1866 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 MROH7-TTC4A0A0A0MT08 1334 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 FRMPD4Q14CM0 1322 aa3.64□□□□□ -1.83
LIMA1-205ENST00000550592 SDK1Q7Z5N4 2213 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 DOPEY2Q9Y3R5 2298 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 MBLAC1A4D2B0 266 aaPredicted RBP3.63□□□□□ -1.83
LIMA1-205ENST00000550592 KIAA0754O94854 1291 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 GIG44P09565 113 aaPredicted RBP3.63□□□□□ -1.83
LIMA1-205ENST00000550592 RPA2P15927 270 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 RDXP35241 583 aaKnown RBP3.63□□□□□ -1.83
LIMA1-205ENST00000550592 BTDP43251 543 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 PPT1P50897 306 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 MRPS11P82912 194 aaKnown RBP3.63□□□□□ -1.83
LIMA1-205ENST00000550592 ST3GAL3Q11203 375 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 LAGE3Q14657 143 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 ZNF239Q16600 458 aaKnown RBP3.63□□□□□ -1.83
LIMA1-205ENST00000550592 TIGITQ495A1 244 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 ACSM5Q6NUN0 579 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 FAM71F2Q6NXP2 309 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 GPR65Q8IYL9 337 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 OR2T33Q8NG76 320 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 OR2T3Q8NH03 318 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 RLN3Q8WXF3 142 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 FAM3CQ92520 227 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 VSIG2Q96IQ7 327 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 MTG1Q9BT17 334 aaPredicted RBP3.63□□□□□ -1.83
LIMA1-205ENST00000550592 POMKQ9H5K3 350 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 SLC7A10Q9NS82 523 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 SPRR3Q9UBC9 169 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 OARD1Q9Y530 152 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 FRYLO94915 3013 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 SMG1Q96Q15 3661 aaKnown RBP3.63□□□□□ -1.83
LIMA1-205ENST00000550592 ASTN1O14525 1302 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 TEX15Q9BXT5 2789 aa3.63□□□□□ -1.83
LIMA1-205ENST00000550592 COL6A6A6NMZ7 2263 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 FAM168BA1KXE4 195 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 NPIPA7E9PJI5 369 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 H0YCG3 227 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 BTN3A3O00478 584 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 MSH4O15457 936 aa3.62□□□□□ -1.83
LIMA1-205ENST00000550592 MAGEB3O15480 346 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms