RNA–Protein interactions for RNA: ENST00000507063.1

NEDD4-206, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4, Length 457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-206ENST00000507063 CIB4A0PJX0 185 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 ZC3H12DA2A288 527 aaKnown RBP5.67□□□□□ -1.5
NEDD4-206ENST00000507063 GOLGA8OA6NCC3 632 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 TMEM114B3SHH9 223 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 GOLGA8NF8WBI6 632 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 H3BQF6 201 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 KIF2AO00139 706 aaPredicted RBP5.67□□□□□ -1.5
NEDD4-206ENST00000507063 KLF11O14901 512 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 TPD52L2O43399 206 aaKnown RBP5.67□□□□□ -1.5
NEDD4-206ENST00000507063 NPHS1O60500 1241 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 EIF4E2O60573 245 aaKnown RBP5.67□□□□□ -1.5
NEDD4-206ENST00000507063 SCN2BO60939 215 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 CHEK2O96017 543 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 CSTAP01040 98 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 ITGA5P08648 1049 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 IGHV4-31P0DP07 118 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 TFPIP10646 304 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 NEFHP12036 1026 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 PGM1P36871 562 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 SUMO3P55854 103 aaPredicted RBP5.67□□□□□ -1.5
NEDD4-206ENST00000507063 OR2B6P58173 313 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 SRSF3P84103 164 aaKnown RBP5.67□□□□□ -1.5
NEDD4-206ENST00000507063 MVKQ03426 396 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 LGALS3BPQ08380 585 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 RAB35Q15286 201 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 ZNF141Q15928 474 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 ETFDHQ16134 617 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 ARHGAP11BQ3KRB8 267 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 SPATS1Q496A3 300 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 ATP6AP1LQ52LC2 224 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 SYT14P1Q58G82 188 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 TSPO2Q5TGU0 170 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 AGAP6Q5VW22 663 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 FBXW9Q5XUX1 488 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 ABLIM2Q6H8Q1 611 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 TYW3Q6IPR3 259 aaKnown RBP5.67□□□□□ -1.5
NEDD4-206ENST00000507063 C3orf33Q6P1S2 294 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 TNFAIP8L2Q6P589 184 aaPredicted RBP5.67□□□□□ -1.5
NEDD4-206ENST00000507063 MTDHQ86UE4 582 aaKnown RBP5.67□□□□□ -1.5
NEDD4-206ENST00000507063 MUC15Q8N387 334 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 TCP10LQ8TDR4 215 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 C10orf105Q8TEF2 133 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 XAGE5Q8WWM1 108 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 CNOT9Q92600 299 aaKnown RBP5.67□□□□□ -1.5
NEDD4-206ENST00000507063 PPP3R2Q96LZ3 170 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 DHRS9Q9BPW9 319 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 SOX7Q9BT81 388 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 NMUR2Q9GZQ4 415 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 IQCGQ9H095 443 aaKnown RBP5.67□□□□□ -1.5
NEDD4-206ENST00000507063 OR51I1Q9H343 314 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 SLC7A10Q9NS82 523 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 CBLN4Q9NTU7 201 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 ACER3Q9NUN7 267 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 POU2F3Q9UKI9 436 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 NOSIPQ9Y314 301 aaKnown RBP5.67□□□□□ -1.5
NEDD4-206ENST00000507063 CADP27708 2225 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 ABCA1O95477 2261 aa5.67□□□□□ -1.5
NEDD4-206ENST00000507063 YLPM1P49750 1951 aaKnown RBP5.66□□□□□ -1.5
NEDD4-206ENST00000507063 RNF103-CHMP3A0A140T963 221 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 TMEM72A0PK05 275 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 WDR91A4D1P6 747 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 ANKRD34BA5PLL1 514 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 ATP6V1G2-DDX39BF2Z307 99 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 PDLIM1O00151 329 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 MRPL33O75394 65 aaKnown RBP5.66□□□□□ -1.5
NEDD4-206ENST00000507063 STX11O75558 287 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 CPSF4O95639 269 aaKnown RBP5.66□□□□□ -1.5
NEDD4-206ENST00000507063 HSPA4LO95757 839 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 FAM157CP0CG43 387 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 CDH2P19022 906 aaPredicted RBP5.66□□□□□ -1.5
NEDD4-206ENST00000507063 PGCP20142 388 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 PRPS1L1P21108 318 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 IDH2P48735 452 aaKnown RBP5.66□□□□□ -1.5
NEDD4-206ENST00000507063 NME5P56597 212 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 ERVFRD-1P60508 538 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 NAA20P61599 178 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 TUBA1BP68363 451 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 TUBA4AP68366 448 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 H3F3AP84243 136 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 LOXL1Q08397 574 aaPredicted RBP5.66□□□□□ -1.5
NEDD4-206ENST00000507063 SYPL1Q16563 259 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 LSM12Q3MHD2 195 aaKnown RBP5.66□□□□□ -1.5
NEDD4-206ENST00000507063 HIKESHIQ53FT3 197 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 EMBQ6PCB8 327 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 CLEC2AQ6UVW9 174 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 TMEM108Q6UXF1 575 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 FRRS1Q6ZNA5 592 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 TUBA1AQ71U36 451 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 EIF3MQ7L2H7 374 aaKnown RBP5.66□□□□□ -1.5
NEDD4-206ENST00000507063 FBXL14Q8N1E6 418 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 ZCCHC24Q8N2G6 241 aaKnown RBP5.66□□□□□ -1.5
NEDD4-206ENST00000507063 ZNF781Q8N8C0 355 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 ANKFN1Q8N957 763 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 ZIC4Q8N9L1 334 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 FAM71CQ8NEG0 241 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 OR4A15Q8NGL6 344 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 ZNF563Q8TA94 476 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 SFXN5Q8TD22 340 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 TMEM158Q8WZ71 300 aa5.66□□□□□ -1.5
NEDD4-206ENST00000507063 ST8SIA1Q92185 356 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms