RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 IFI30P13284 250 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 ZNF24P17028 368 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 GRPRP30550 384 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 GPR4P46093 362 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 RPS5P46782 204 aaKnown RBP8.84□□□□□ -0.99
SF3A1-207ENST00000471342 CLK1P49759 484 aaKnown RBP8.84□□□□□ -0.99
SF3A1-207ENST00000471342 DIO1P49895 249 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 ZNF41P51814 821 aaPredicted RBP8.84□□□□□ -0.99
SF3A1-207ENST00000471342 ADARB1P78563 741 aaKnown RBP8.84□□□□□ -0.99
SF3A1-207ENST00000471342 CDK5Q00535 292 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 ZP4Q12836 540 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 FAM69AQ5T7M9 428 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 RAET1LQ5VY80 246 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 ABLIM2Q6H8Q1 611 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 ACSM5Q6NUN0 579 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 C3orf33Q6P1S2 294 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 ZNF620Q6ZNG0 422 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 RASSF6Q6ZTQ3 369 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 USP51Q70EK9 711 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 STK32CQ86UX6 486 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 HIPK1Q86Z02 1210 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 SVOPLQ8N434 492 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 MARVELD2Q8N4S9 558 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 TMEM99Q8N816 258 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 ICA1LQ8NDH6 482 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 OR14L1PQ8NHC6 308 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 ABTB1Q969K4 478 aaPredicted RBP8.84□□□□□ -0.99
SF3A1-207ENST00000471342 UBE2FQ969M7 185 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 NMD3Q96D46 503 aaKnown RBP8.84□□□□□ -0.99
SF3A1-207ENST00000471342 KLHL15Q96M94 604 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 SFXN2Q96NB2 322 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 GPX7Q96SL4 187 aaPredicted RBP8.84□□□□□ -0.99
SF3A1-207ENST00000471342 TUBA1CQ9BQE3 449 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 GABARAPL3Q9BY60 117 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 GRIP2Q9C0E4 1043 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 EGLN3Q9H6Z9 239 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 YY1AP1Q9H869 796 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 HHATLQ9HCP6 504 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 MRPL39Q9NYK5 338 aaKnown RBP8.84□□□□□ -0.99
SF3A1-207ENST00000471342 KLHL13Q9P2N7 655 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 CLCF1Q9UBD9 225 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 SLC13A4Q9UKG4 626 aa8.84□□□□□ -0.99
SF3A1-207ENST00000471342 FAM32AQ9Y421 112 aaKnown RBP8.84□□□□□ -0.99
SF3A1-207ENST00000471342 TRAV27A0A087WT01 109 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 ELOA3DA6NLF2 546 aaPredicted RBP8.83□□□□□ -1
SF3A1-207ENST00000471342 MCIDASD6RGH6 385 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 LINC01387J3KSC0 135 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 M0R082 166 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 KPNA4O00629 521 aaPredicted RBP8.83□□□□□ -1
SF3A1-207ENST00000471342 TNFSF11O14788 317 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 CXCL13O43927 109 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 STAMBPO95630 424 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 SNAP29O95721 258 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 TGM6O95932 706 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 ADAP00813 363 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 POU2F1P14859 743 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 GABRB1P18505 474 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 CXCR1P25024 350 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 SFTPDP35247 375 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 ALDH3A2P51648 485 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 MLLT10P55197 1068 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 SMIM11AP58511 58 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 COPZ1P61923 177 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 ALDH6A1Q02252 535 aaKnown RBP8.83□□□□□ -1
SF3A1-207ENST00000471342 PLGLB1Q02325 96 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 RUNX1T1Q06455 604 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 TRIP10Q15642 601 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 LRRC36Q1X8D7 754 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 ELOA3BQ3SY89 546 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 FGD3Q5JSP0 725 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 OTUD3Q5T2D3 398 aaPredicted RBP8.83□□□□□ -1
SF3A1-207ENST00000471342 TTC33Q6PID6 262 aaPredicted RBP8.83□□□□□ -1
SF3A1-207ENST00000471342 ZNF730Q6ZMV8 503 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 ZDHHC13Q8IUH4 622 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 CCDC103Q8IW40 242 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 KDM8Q8N371 416 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 CLDN22Q8N7P3 220 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 ELOA3Q8NG57 546 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 OR10D3Q8NH80 312 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 OR2V1Q8NHB1 315 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 ZNF417Q8TAU3 575 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 GNPDA2Q8TDQ7 276 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 FBLIM1Q8WUP2 373 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 ZNRF4Q8WWF5 429 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 OSTF1Q92882 214 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 STMN2Q93045 179 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 GTPBP3Q969Y2 492 aaKnown RBP8.83□□□□□ -1
SF3A1-207ENST00000471342 SGTBQ96EQ0 304 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 ZNF587Q96SQ5 575 aaPredicted RBP8.83□□□□□ -1
SF3A1-207ENST00000471342 PITX2Q99697 317 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 FKRPQ9H9S5 495 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 NRIP3Q9NQ35 241 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 PNPLA3Q9NST1 481 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 DKKL1Q9UK85 242 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 NDRG4Q9ULP0 352 aaKnown RBP8.83□□□□□ -1
SF3A1-207ENST00000471342 MGAT4BQ9UQ53 548 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 MED31Q9Y3C7 131 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 HDGFL3Q9Y3E1 203 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 POLEQ07864 2286 aa8.83□□□□□ -1
SF3A1-207ENST00000471342 ALPK2Q86TB3 2170 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms