RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 AIMP2Q13155 320 aaKnown RBP7.52□□□□□ -1.21
GTF3A-206ENST00000470606 TUBA3CQ13748 450 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 NEDD8Q15843 81 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 TMEM44Q2T9K0 475 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 C1orf140Q5VVS0 124 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 TIGD3Q6B0B8 471 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 TUBA3EQ6PEY2 450 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 RTL4Q6ZR62 310 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 LINC00696Q6ZRV3 163 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 PLCZ1Q86YW0 608 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 WDFY1Q8IWB7 410 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 ZPLD1Q8TCW7 415 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 ZNRF4Q8WWF5 429 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 KIAA1143Q96AT1 154 aaPredicted RBP7.52□□□□□ -1.21
GTF3A-206ENST00000470606 SGCZQ96LD1 299 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 DDOQ99489 341 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 LHPPQ9H008 270 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 RBM38Q9H0Z9 239 aaKnown RBP7.52□□□□□ -1.21
GTF3A-206ENST00000470606 TMEM185BQ9H7F4 350 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 KRCC1Q9NPI7 259 aaPredicted RBP7.52□□□□□ -1.21
GTF3A-206ENST00000470606 NRIP3Q9NQ35 241 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 NANSQ9NR45 359 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 BATF3Q9NR55 127 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 TUBA8Q9NY65 449 aaPredicted RBP7.52□□□□□ -1.21
GTF3A-206ENST00000470606 HIF3AQ9Y2N7 669 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 ZNF337Q9Y3M9 751 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 CSAG2Q9Y5P2 127 aa7.52□□□□□ -1.21
GTF3A-206ENST00000470606 RTTNQ86VV8 2226 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 TLN1Q9Y490 2541 aaKnown RBP7.51□□□□□ -1.21
GTF3A-206ENST00000470606 TRAV36DV7A0A075B6V5 113 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 A8MVM7 634 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 KDM4EB2RXH2 506 aaPredicted RBP7.51□□□□□ -1.21
GTF3A-206ENST00000470606 H3BML4 177 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 BLOC1S5-TXNDC5H3BN57 136 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 TLX3O43711 291 aaPredicted RBP7.51□□□□□ -1.21
GTF3A-206ENST00000470606 INMTO95050 263 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 RCBTB2O95199 551 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 APOL3O95236 402 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 DBTP11182 482 aaKnown RBP7.51□□□□□ -1.21
GTF3A-206ENST00000470606 IMPDH2P12268 514 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 PEPDP12955 493 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 HIST1H1CP16403 213 aaKnown RBP7.51□□□□□ -1.21
GTF3A-206ENST00000470606 MSX1P28360 303 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 CYB561P49447 251 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 NR1H2P55055 460 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 ERVK-25P63136 954 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 ZNF91Q05481 1191 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 ST3GAL4Q11206 333 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 TOP3AQ13472 1001 aaPredicted RBP7.51□□□□□ -1.21
GTF3A-206ENST00000470606 TBC1D25Q3MII6 688 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 SLC6A19Q695T7 634 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 JMJD6Q6NYC1 403 aaPredicted RBP7.51□□□□□ -1.21
GTF3A-206ENST00000470606 FAM122BQ7Z309 247 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 CPOQ8IVL8 374 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 GALNT16Q8N428 558 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 CYB561A3Q8NBI2 242 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 ATP6V1C2Q8NEY4 427 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 ANKK1Q8NFD2 765 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 FAR1Q8WVX9 515 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 TMEM234Q8WY98 164 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 KISS1RQ969F8 398 aaPredicted RBP7.51□□□□□ -1.21
GTF3A-206ENST00000470606 JSRP1Q96MG2 331 aaPredicted RBP7.51□□□□□ -1.21
GTF3A-206ENST00000470606 IP6K3Q96PC2 410 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 COPS4Q9BT78 406 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 ZNF552Q9H707 407 aaPredicted RBP7.51□□□□□ -1.21
GTF3A-206ENST00000470606 CMC2Q9NRP2 79 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 SDHAF3Q9NRP4 125 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 LRFN1Q9P244 771 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 RPH3AQ9Y2J0 694 aaPredicted RBP7.51□□□□□ -1.21
GTF3A-206ENST00000470606 IER3IP1Q9Y5U9 82 aa7.51□□□□□ -1.21
GTF3A-206ENST00000470606 PHF3Q92576 2039 aaKnown RBP7.51□□□□□ -1.21
GTF3A-206ENST00000470606 SH3D21A4FU49 640 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 ZNF814B7Z6K7 855 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 H3BSA7 217 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 MPZL2O60487 215 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 NDUFB2O95178 105 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 CDK1P06493 297 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 BMP7P18075 431 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 APOBEC1P41238 236 aaKnown RBP7.5□□□□□ -1.21
GTF3A-206ENST00000470606 HTR3AP46098 478 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 ZNF41P51814 821 aaPredicted RBP7.5□□□□□ -1.21
GTF3A-206ENST00000470606 GP2P55259 537 aaKnown RBP7.5□□□□□ -1.21
GTF3A-206ENST00000470606 SOX8P57073 446 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 B3GALT5-AS1P59052 145 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 OC90Q02509 493 aaPredicted RBP7.5□□□□□ -1.21
GTF3A-206ENST00000470606 FOXC1Q12948 553 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 CRMP1Q14194 572 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 IRF3Q14653 427 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 GLYR1Q49A26 553 aaPredicted RBP7.5□□□□□ -1.21
GTF3A-206ENST00000470606 FAM69AQ5T7M9 428 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 PLBD1Q6P4A8 553 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 PAQR6Q6TCH4 344 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 DND1Q8IYX4 353 aaKnown RBP7.5□□□□□ -1.21
GTF3A-206ENST00000470606 GHDCQ8N2G8 530 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 KDM8Q8N371 416 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 C10orf53Q8N6V4 93 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 CLEC1AQ8NC01 280 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 OR52L1Q8NGH7 329 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 OR4K13Q8NH42 304 aa7.5□□□□□ -1.21
GTF3A-206ENST00000470606 SLC25A36Q96CQ1 311 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms