RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 MSH4O15457 936 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 KRT34O76011 436 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 SERPINA3P01011 423 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 IL1BP01584 269 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 H2BFMP0C1H6 154 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 ZNF32P17041 273 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 CYP2B6P20813 491 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 LONP1P36776 959 aaKnown RBP3.77□□□□□ -1.81
PTCD3-205ENST00000464541 MAGEA1P43355 309 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 CARD18P57730 90 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 KRTAP10-8P60410 259 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 RPL23AP62750 156 aaKnown RBP3.77□□□□□ -1.81
PTCD3-205ENST00000464541 NCBP1Q09161 790 aaKnown RBP3.77□□□□□ -1.81
PTCD3-205ENST00000464541 TATDN3Q17R31 274 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 ZNF630Q2M218 657 aaPredicted RBP3.77□□□□□ -1.81
PTCD3-205ENST00000464541 RABGAP1LQ5R372 815 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 CCDC122Q5T0U0 273 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 NCR3LG1Q68D85 454 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 ASPHD2Q6ICH7 369 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 SUMF2Q8NBJ7 301 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 BLOC1S5Q8TDH9 187 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 PEX13Q92968 403 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 MYDGFQ969H8 173 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 FAM104AQ969W3 186 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 IFT74Q96LB3 600 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 ATP6V1G3Q96LB4 118 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 SIKE1Q9BRV8 207 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 CHRDL1Q9BU40 450 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 IQCGQ9H095 443 aaKnown RBP3.77□□□□□ -1.81
PTCD3-205ENST00000464541 HAUS4Q9H6D7 363 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 VCPKMTQ9H867 229 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 LZTFL1Q9NQ48 299 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 NEU3Q9UQ49 428 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 UGT2A1Q9Y4X1 527 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 CDC42BPBQ9Y5S2 1711 aa3.77□□□□□ -1.81
PTCD3-205ENST00000464541 SF3B1O75533 1304 aaKnown RBP eCLIP3.76□□□□□ -1.81
PTCD3-205ENST00000464541 SERTM2A0A1B0GWG4 89 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 A8MUA0 341 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 SPECC1L-ADORA2AF8WAN1 911 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 ZNF208O43345 1280 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 YEATS4O95619 227 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 GNA14O95837 355 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 IQCF3P0C7M6 154 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 UQCRFS1P1P0C7P4 283 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 PRDX3P30048 256 aaKnown RBP3.76□□□□□ -1.81
PTCD3-205ENST00000464541 DLSTP36957 453 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 CSNK1G2P78368 415 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 CBX1P83916 185 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 IL18Q14116 193 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 ARL6IP1Q15041 203 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 NSDHLQ15738 373 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 PHYHD1Q5SRE7 291 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 CASC10Q5T4H9 136 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 AGBL2Q5U5Z8 902 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 CLEC2AQ6UVW9 174 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 FAM228AQ86W67 206 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 ZNF321PQ8N8H1 164 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 OR10A7Q8NGE5 316 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 OR2T3Q8NH03 318 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 SUN5Q8TC36 379 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 STARD8Q92502 1023 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 MRPS31Q92665 395 aaKnown RBP3.76□□□□□ -1.81
PTCD3-205ENST00000464541 UCN3Q969E3 161 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 LRRC39Q96DD0 335 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 NRBF2Q96F24 287 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 SLC41A3Q96GZ6 507 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 MBOAT4Q96T53 435 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 METTL7AQ9H8H3 244 aa3.76□□□□□ -1.81
PTCD3-205ENST00000464541 NOSIPQ9Y314 301 aaKnown RBP3.76□□□□□ -1.81
PTCD3-205ENST00000464541 THSD7BQ9C0I4 1608 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 MBLAC1A4D2B0 266 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-205ENST00000464541 RNF113AO15541 343 aaKnown RBP3.75□□□□□ -1.81
PTCD3-205ENST00000464541 NPIPB7O75200 414 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 ZNF780AO75290 641 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-205ENST00000464541 NPPAP01160 153 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 IGHV4-34P06331 123 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 CCDC172P0C7W6 258 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 BMI1P35226 326 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 CTRLP40313 264 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 SYKP43405 635 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 AP3M2P53677 418 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 IRX3P78415 501 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-205ENST00000464541 NUCB2P80303 420 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 DNAJC3Q13217 504 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 SRSF5Q13243 272 aaKnown RBP3.75□□□□□ -1.81
PTCD3-205ENST00000464541 ARFRP1Q13795 201 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 EXOC3L2Q2M3D2 409 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 CARD17Q5XLA6 110 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 CYB5R2Q6BCY4 276 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 CCDC137Q6PK04 289 aaKnown RBP3.75□□□□□ -1.81
PTCD3-205ENST00000464541 RNF165Q6ZSG1 346 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 TPRA1Q86W33 373 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 ZNF433Q8N7K0 673 aaPredicted RBP3.75□□□□□ -1.81
PTCD3-205ENST00000464541 TRMT10AQ8TBZ6 339 aaKnown RBP3.75□□□□□ -1.81
PTCD3-205ENST00000464541 PAQR8Q8TEZ7 354 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.75□□□□□ -1.81
PTCD3-205ENST00000464541 NT5C3BQ969T7 300 aa3.75□□□□□ -1.81
PTCD3-205ENST00000464541 POLR2J2Q9GZM3 115 aaKnown RBP3.75□□□□□ -1.81
PTCD3-205ENST00000464541 POLR2J3Q9H1A7 115 aaKnown RBP3.75□□□□□ -1.81
PTCD3-205ENST00000464541 FN3KRPQ9HA64 309 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms