RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ARMC10Q8N2F6 343 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 DEFB124Q8NES8 71 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 IFT27Q9BW83 186 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 WDR12Q9GZL7 423 aaKnown RBP14.13□□□□□ -0.15
LSM6-201ENST00000296581 ZNF160Q9HCG1 818 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 HMG20AQ9NP66 347 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 TAS2R10Q9NYW0 307 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 PCDHGB6Q9Y5F9 930 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 ANKUB1A6NFN9 424 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 LRRN3E7EW58 273 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 TAF4O00268 1085 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 CCRL2O00421 344 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 TERTO14746 1132 aaKnown RBP14.13□□□□□ -0.15
LSM6-201ENST00000296581 GMFGO60234 142 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 ITGA10O75578 1167 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 NDUFB2O95178 105 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 SLC2A10O95528 541 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 NUDT14O95848 222 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 LCKP06239 509 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 S100A5P33763 92 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 DLX5P56178 289 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 RPS4XP62701 263 aaKnown RBP14.13□□□□□ -0.15
LSM6-201ENST00000296581 RPS15P62841 145 aaKnown RBP14.13□□□□□ -0.15
LSM6-201ENST00000296581 FOXK2Q01167 660 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 RNLSQ5VYX0 342 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 SLC51BQ86UW2 128 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 SNX29P2Q8IUI4 249 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 LRRC17Q8N6Y2 441 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 OR10G3Q8NGC4 313 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 TMEM80Q96HE8 168 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 FAM117AQ9C073 453 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 CMC2Q9NRP2 79 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 RYDENQ9NUL5 291 aaKnown RBP14.13□□□□□ -0.15
LSM6-201ENST00000296581 FAM86C1Q9NVL1 165 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 KNTC1P50748 2209 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 IGLV3-32A0A0A0MS00 114 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 B4DXG7 233 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 NXNL2Q5VZ03 156 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 GRINAQ7Z429 371 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 CACTIN-AS1Q8N1I8 211 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 CRELD1Q96HD1 420 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 GALNT9Q9HCQ5 603 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 HINT3Q9NQE9 182 aaKnown RBP14.12□□□□□ -0.15
LSM6-201ENST00000296581 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.12□□□□□ -0.15
LSM6-201ENST00000296581 YARS2Q9Y2Z4 477 aaKnown RBP14.12□□□□□ -0.15
LSM6-201ENST00000296581 C21orf140B9A014 251 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 MAN1A2O60476 641 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 ADORA3P0DMS8 318 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 CXCR1P25024 350 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 OTX2P32243 289 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 SOX3P41225 446 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 POLR2HP52434 150 aaKnown RBP14.12□□□□□ -0.15
LSM6-201ENST00000296581 NLGN4YQ8NFZ3 816 aaPredicted RBP14.12□□□□□ -0.15
LSM6-201ENST00000296581 RFKQ969G6 155 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 YIPF6Q96EC8 236 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 COQ7Q99807 217 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 FUNDC2Q9BWH2 189 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 GPR87Q9BY21 358 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 AKIP1Q9NQ31 210 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 KLRF1Q9NZS2 232 aa14.12□□□□□ -0.15
LSM6-201ENST00000296581 WARS2Q9UGM6 360 aaKnown RBP14.12□□□□□ -0.15
LSM6-201ENST00000296581 IRGMA1A4Y4 181 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 PPP1R3DO95685 299 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 HPP00738 406 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 PTHP01270 115 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 FTH1P19P0C7X4 201 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 PEPDP12955 493 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 M6PRP20645 277 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 PSMB9P28065 219 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 MSX1P28360 303 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 ST13P50502 369 aaKnown RBP14.11□□□□□ -0.15
LSM6-201ENST00000296581 RAB40BQ12829 278 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 KLHL22Q53GT1 634 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 BICRALQ6AI39 1079 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 TMEM81Q6P7N7 255 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 OPN5Q6U736 354 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 ELMOD2Q8IZ81 293 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 TMEM234Q8WY98 164 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 ST8SIA1Q92185 356 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 LGALS12Q96DT0 336 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 KTI12Q96EK9 354 aaPredicted RBP14.11□□□□□ -0.15
LSM6-201ENST00000296581 COL25A1Q9BXS0 654 aaPredicted RBP14.11□□□□□ -0.15
LSM6-201ENST00000296581 FGF20Q9NP95 211 aaPredicted RBP14.11□□□□□ -0.15
LSM6-201ENST00000296581 SDHAF3Q9NRP4 125 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 ZMAT5Q9UDW3 170 aaKnown RBP14.11□□□□□ -0.15
LSM6-201ENST00000296581 CHRNA9Q9UGM1 479 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 DIMT1Q9UNQ2 313 aaKnown RBP14.11□□□□□ -0.15
LSM6-201ENST00000296581 HIF3AQ9Y2N7 669 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 WIF1Q9Y5W5 379 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 CPAMD8Q8IZJ3 1885 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 C2orf72A6NCS6 295 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 TNFSF15O95150 251 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 WISP1O95388 367 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 ASAH2BP0C7U1 165 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 ICAM2P13598 275 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 CASP3P42574 277 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 HTR3AP46098 478 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 CDH11P55287 796 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 MLF1P58340 268 aa14.11□□□□□ -0.15
LSM6-201ENST00000296581 LTBQ06643 244 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms