RNA–Protein interactions for RNA: YOR205C

GEP3, Transcript of Protein required for mitochondrial ribosome small subunit biogenesis, yeast

Gene GEP3, Length 1,671 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEP3	YOR205C	FTR1	P40088	404 aa		5.8	□□□□□ -1.48
GEP3	YOR205C	SDS3	P40505	327 aa		5.8	□□□□□ -1.48
GEP3	YOR205C	ASN1	P49089	572 aa	Known RBP	5.8	□□□□□ -1.48
GEP3	YOR205C	VPS60	Q03390	229 aa		5.8	□□□□□ -1.48
GEP3	YOR205C	YML082W	Q04533	649 aa	Known RBP	5.8	□□□□□ -1.48
GEP3	YOR205C	TOM70	P07213	617 aa	Known RBP	5.79	□□□□□ -1.48
GEP3	YOR205C	MSS51	P32335	436 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	SWI3	P32591	825 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	MMS4	P38257	691 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	MCX1	P38323	520 aa	Predicted RBP	5.79	□□□□□ -1.48
GEP3	YOR205C	KIC1	P38692	1080 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	SEC9	P40357	651 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	ORC5	P50874	479 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	ESBP6	P53918	673 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	TBF1	Q02457	562 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	TRS130	Q03660	1102 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	ECM7	Q06200	448 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	SHS1	Q07657	551 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	SLX4	Q12098	748 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	SUT2	Q12286	268 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	MAM3	Q12296	706 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	NAT1	P12945	854 aa	Known RBP	5.79	□□□□□ -1.48
GEP3	YOR205C	KIP1	P28742	1111 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	PAH1	P32567	862 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	TMT1	P32643	299 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	BCS1	P32839	456 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	RAD54	P32863	898 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	NDC80	P40460	691 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	HXT8	P40886	569 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	MMM1	P41800	426 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	SGM1	P47166	707 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	DAN4	P47179	1161 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	RPA49	Q01080	415 aa	Predicted RBP	5.79	□□□□□ -1.48
GEP3	YOR205C	HOS3	Q02959	697 aa	Known RBP	5.79	□□□□□ -1.48
GEP3	YOR205C	CWC21	Q03375	135 aa	Known RBP	5.79	□□□□□ -1.48
GEP3	YOR205C	VPS72	Q03388	795 aa		5.79	□□□□□ -1.48
GEP3	YOR205C	SNF1	P06782	633 aa	Known RBP	5.78	□□□□□ -1.48
GEP3	YOR205C	CDC33	P07260	213 aa	Known RBP	5.78	□□□□□ -1.48
GEP3	YOR205C	TUP1	P16649	713 aa		5.78	□□□□□ -1.48
GEP3	YOR205C	BUD2	P33314	1104 aa		5.78	□□□□□ -1.48
GEP3	YOR205C	YMR124W	P39523	943 aa	Known RBP	5.78	□□□□□ -1.48
GEP3	YOR205C	RRD1	P40454	393 aa	Known RBP	5.78	□□□□□ -1.48
GEP3	YOR205C	MNP1	P53163	194 aa	Predicted RBP	5.78	□□□□□ -1.48
GEP3	YOR205C	ENV11	P53246	860 aa		5.78	□□□□□ -1.48
GEP3	YOR205C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.78	□□□□□ -1.48	not detected
GEP3	YOR205C	VAC14	Q06708	880 aa		5.78	□□□□□ -1.48
GEP3	YOR205C	IWR1	Q07532	353 aa	Predicted RBP	5.78	□□□□□ -1.48
GEP3	YOR205C	YDL206W	Q12424	762 aa		5.78	□□□□□ -1.48
GEP3	YOR205C	RAD57	P25301	460 aa		5.77	□□□□□ -1.49
GEP3	YOR205C	SPT5	P27692	1063 aa	Known RBP	5.77	□□□□□ -1.49
GEP3	YOR205C	DUR3	P33413	735 aa		5.77	□□□□□ -1.49
GEP3	YOR205C	TRM2	P33753	639 aa		5.77	□□□□□ -1.49
GEP3	YOR205C	PSY2	P40164	858 aa		5.77	□□□□□ -1.49
GEP3	YOR205C	CLA4	P48562	842 aa		5.77	□□□□□ -1.49
GEP3	YOR205C	VPS62	P53285	467 aa		5.77	□□□□□ -1.49
GEP3	YOR205C	JJJ1	P53863	590 aa		5.77	□□□□□ -1.49
GEP3	YOR205C	CUS1	Q02554	436 aa	Predicted RBP	5.77	□□□□□ -1.49
GEP3	YOR205C	ULP1	Q02724	621 aa		5.77	□□□□□ -1.49
GEP3	YOR205C	STE20	Q03497	939 aa	Known RBP	5.77	□□□□□ -1.49
GEP3	YOR205C	DAS2	Q12084	232 aa		5.77	□□□□□ -1.49
GEP3	YOR205C	SFI1	Q12369	946 aa		5.77	□□□□□ -1.49
GEP3	YOR205C	MDM20	Q12387	796 aa	Known RBP	5.77	□□□□□ -1.49
GEP3	YOR205C	CKI1	P20485	582 aa		5.76	□□□□□ -1.49
GEP3	YOR205C	SEC21	P32074	935 aa	Known RBP	5.76	□□□□□ -1.49
GEP3	YOR205C	LDH1	P38139	375 aa		5.76	□□□□□ -1.49
GEP3	YOR205C	MRX3	P38172	270 aa		5.76	□□□□□ -1.49
GEP3	YOR205C	ALD5	P40047	520 aa	Known RBP	5.76	□□□□□ -1.49
GEP3	YOR205C	EFM4	P40516	257 aa		5.76	□□□□□ -1.49
GEP3	YOR205C	SBE2	P42223	864 aa	Known RBP	5.76	□□□□□ -1.49
GEP3	YOR205C	LAM5	P43560	674 aa		5.76	□□□□□ -1.49
GEP3	YOR205C	CPR7	P47103	393 aa		5.76	□□□□□ -1.49
GEP3	YOR205C	TAD1	P53065	400 aa		5.76	□□□□□ -1.49
GEP3	YOR205C	YGR021W	P53212	290 aa		5.76	□□□□□ -1.49
GEP3	YOR205C	SOV1	Q04748	898 aa		5.76	□□□□□ -1.49
GEP3	YOR205C	SML1	Q04964	104 aa		5.76	□□□□□ -1.49
GEP3	YOR205C	YLR001C	Q07895	862 aa		5.76	□□□□□ -1.49
GEP3	YOR205C	ZPS1	Q12512	249 aa		5.76	□□□□□ -1.49
GEP3	YOR205C	ECM29	P38737	1868 aa		5.76	□□□□□ -1.49
GEP3	YOR205C	TRP2	P00899	507 aa	Known RBP	5.75	□□□□□ -1.49
GEP3	YOR205C	PET111	P08468	800 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	YEL043W	P32618	956 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	YKL050C	P35736	922 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	REI1	P38344	393 aa	Predicted RBP	5.75	□□□□□ -1.49
GEP3	YOR205C	TCD1	P38756	429 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	CEP3	P40969	608 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	ALT2	P52892	507 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	YMR018W	Q04364	514 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	SGT2	Q12118	346 aa	Known RBP	5.75	□□□□□ -1.49
GEP3	YOR205C	MCM16	Q12262	181 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	ASP3-2	P0CX77	362 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	ASP3-3	P0CX78	362 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	ASP3-4	P0CX79	362 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	ASP3-1	P0CZ17	362 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	COX11	P19516	300 aa	Known RBP	5.75	□□□□□ -1.49
GEP3	YOR205C	VMA4	P22203	233 aa	Known RBP	5.75	□□□□□ -1.49
GEP3	YOR205C	DAL2	P25335	343 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	HXT1	P32465	570 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	UIP5	P36137	443 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	DRE2	P36152	348 aa		5.75	□□□□□ -1.49
GEP3	YOR205C	TRZ1	P36159	838 aa	Predicted RBP	5.75	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms