RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W CIT2P08679 460 aa7.24□□□□□ -1.25
LSC1YOR142W CHS2P14180 963 aa7.24□□□□□ -1.25
LSC1YOR142W IDI1P15496 288 aa7.24□□□□□ -1.25
LSC1YOR142W OM45P16547 393 aa7.24□□□□□ -1.25
LSC1YOR142W VMA1P17255 1071 aaKnown RBP7.24□□□□□ -1.25
LSC1YOR142W BIO2P32451 375 aa7.24□□□□□ -1.25
LSC1YOR142W PEX2P32800 271 aa7.24□□□□□ -1.25
LSC1YOR142W TRM2P33753 639 aa7.24□□□□□ -1.25
LSC1YOR142W CCL1P37366 393 aa7.24□□□□□ -1.25
LSC1YOR142W CWC21Q03375 135 aaKnown RBP7.24□□□□□ -1.25
LSC1YOR142W RCR2Q03446 210 aaKnown RBP7.24□□□□□ -1.25
LSC1YOR142W DON1Q05610 365 aa7.24□□□□□ -1.25
LSC1YOR142W CDD1Q06549 142 aa7.24□□□□□ -1.25
LSC1YOR142W DNL4Q08387 944 aaPredicted RBP7.24□□□□□ -1.25
LSC1YOR142W FAL1Q12099 399 aaKnown RBP7.24□□□□□ -1.25
LSC1YOR142W ASP3-2P0CX77 362 aa7.23□□□□□ -1.25
LSC1YOR142W ASP3-3P0CX78 362 aa7.23□□□□□ -1.25
LSC1YOR142W ASP3-4P0CX79 362 aa7.23□□□□□ -1.25
LSC1YOR142W ASP3-1P0CZ17 362 aa7.23□□□□□ -1.25
LSC1YOR142W MAK16P10962 306 aaPredicted RBP7.23□□□□□ -1.25
LSC1YOR142W POL3P15436 1097 aa7.23□□□□□ -1.25
LSC1YOR142W IME1P21190 360 aa7.23□□□□□ -1.25
LSC1YOR142W RPN12P32496 274 aa7.23□□□□□ -1.25
LSC1YOR142W PIN4P34217 668 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
LSC1YOR142W RSM25P40496 264 aa7.23□□□□□ -1.25
LSC1YOR142W YIR016WP40572 265 aa7.23□□□□□ -1.25
LSC1YOR142W YAP7Q08182 245 aa7.23□□□□□ -1.25
LSC1YOR142W SLX4Q12098 748 aa7.23□□□□□ -1.25
LSC1YOR142W WSC3Q12215 556 aa7.23□□□□□ -1.25
LSC1YOR142W CTF3Q12748 733 aa7.23□□□□□ -1.25
LSC1YOR142W CYS3P31373 394 aaKnown RBP7.22□□□□□ -1.25
LSC1YOR142W SEC21P32074 935 aaKnown RBP7.22□□□□□ -1.25
LSC1YOR142W RAD54P32863 898 aa7.22□□□□□ -1.25
LSC1YOR142W RPC25P35718 212 aa7.22□□□□□ -1.25
LSC1YOR142W PSY4P38193 441 aa7.22□□□□□ -1.25
LSC1YOR142W APM2P38700 605 aa7.22□□□□□ -1.25
LSC1YOR142W YEL023CP39992 682 aa7.22□□□□□ -1.25
LSC1YOR142W YGR130CP53278 816 aa7.22□□□□□ -1.25
LSC1YOR142W SSL2Q00578 843 aa7.22□□□□□ -1.25
LSC1YOR142W EBS1Q03466 884 aaKnown RBP7.22□□□□□ -1.25
LSC1YOR142W RLP24Q07915 199 aaKnown RBP7.22□□□□□ -1.25
LSC1YOR142W ESC8Q08119 714 aa7.22□□□□□ -1.25
LSC1YOR142W ETT1Q08421 412 aaKnown RBP7.22□□□□□ -1.25
LSC1YOR142W SSB1P11484 613 aaKnown RBP7.21□□□□□ -1.26
LSC1YOR142W MRC1P25588 1096 aa7.21□□□□□ -1.26
LSC1YOR142W CDC11P32458 415 aa7.21□□□□□ -1.26
LSC1YOR142W RRM3P38766 723 aa7.21□□□□□ -1.26
LSC1YOR142W YHR054CP38780 354 aa7.21□□□□□ -1.26
LSC1YOR142W SSB2P40150 613 aaKnown RBP7.21□□□□□ -1.26
LSC1YOR142W DAS1P47005 663 aa7.21□□□□□ -1.26
LSC1YOR142W SPC98P53540 846 aa7.21□□□□□ -1.26
LSC1YOR142W SPO71Q03868 1245 aa7.21□□□□□ -1.26
LSC1YOR142W REC8Q12188 680 aa7.21□□□□□ -1.26
LSC1YOR142W CCH1P50077 2039 aa7.2□□□□□ -1.26
LSC1YOR142W HAP2P06774 265 aa7.2□□□□□ -1.26
LSC1YOR142W YET1P35723 206 aa7.2□□□□□ -1.26
LSC1YOR142W ADE17P38009 592 aaKnown RBP7.2□□□□□ -1.26
LSC1YOR142W HMT1P38074 348 aa7.2□□□□□ -1.26
LSC1YOR142W FIG4P42837 879 aa7.2□□□□□ -1.26
LSC1YOR142W STP1Q00947 519 aa7.2□□□□□ -1.26
LSC1YOR142W TBF1Q02457 562 aa7.2□□□□□ -1.26
LSC1YOR142W COG4Q06096 861 aa7.2□□□□□ -1.26
LSC1YOR142W MRI1Q06489 411 aaKnown RBP7.2□□□□□ -1.26
LSC1YOR142W TMA16Q08687 178 aa7.2□□□□□ -1.26
LSC1YOR142W PLP2Q12017 286 aa7.2□□□□□ -1.26
LSC1YOR142W SGT2Q12118 346 aaKnown RBP7.2□□□□□ -1.26
LSC1YOR142W CDC37P06101 506 aaKnown RBP7.19□□□□□ -1.26
LSC1YOR142W NAT1P12945 854 aaKnown RBP7.19□□□□□ -1.26
LSC1YOR142W ATE1P16639 503 aa7.19□□□□□ -1.26
LSC1YOR142W CDC42P19073 191 aa7.19□□□□□ -1.26
LSC1YOR142W PEX1P24004 1043 aa7.19□□□□□ -1.26
LSC1YOR142W SYN8P31377 255 aa7.19□□□□□ -1.26
LSC1YOR142W MNR2P35724 969 aa7.19□□□□□ -1.26
LSC1YOR142W YKL023WP36103 277 aaKnown RBP7.19□□□□□ -1.26
LSC1YOR142W AGP2P38090 596 aa7.19□□□□□ -1.26
LSC1YOR142W PCM1P38628 557 aaKnown RBP7.19□□□□□ -1.26
LSC1YOR142W DMA1P38823 416 aa7.19□□□□□ -1.26
LSC1YOR142W CCC2P38995 1004 aa7.19□□□□□ -1.26
LSC1YOR142W FTR1P40088 404 aa7.19□□□□□ -1.26
LSC1YOR142W MAF1P41910 395 aa7.19□□□□□ -1.26
LSC1YOR142W POL31P46957 487 aa7.19□□□□□ -1.26
LSC1YOR142W ZAP1P47043 880 aa7.19□□□□□ -1.26
LSC1YOR142W YMR1P47147 688 aaKnown RBP RIP-Chip data7.19□□□□□ -1.26not detected
LSC1YOR142W CEF1Q03654 590 aaPredicted RBP7.19□□□□□ -1.26
LSC1YOR142W LCD1Q04377 747 aa7.19□□□□□ -1.26
LSC1YOR142W GFD1Q04839 188 aaKnown RBP7.19□□□□□ -1.26
LSC1YOR142W MRN1Q08925 612 aaKnown RBP RIP-Chip data7.19□□□□□ -1.26not detected
LSC1YOR142W DAP1Q12091 152 aa7.19□□□□□ -1.26
LSC1YOR142W YDL206WQ12424 762 aa7.19□□□□□ -1.26
LSC1YOR142W GAL80P04387 435 aa7.18□□□□□ -1.26
LSC1YOR142W SPO11P23179 398 aa7.18□□□□□ -1.26
LSC1YOR142W RRT12P25381 491 aa7.18□□□□□ -1.26
LSC1YOR142W SWI3P32591 825 aa7.18□□□□□ -1.26
LSC1YOR142W YBR284WP38150 797 aa7.18□□□□□ -1.26
LSC1YOR142W KIC1P38692 1080 aa7.18□□□□□ -1.26
LSC1YOR142W NUT1P53114 1132 aa7.18□□□□□ -1.26
LSC1YOR142W HCR1Q05775 265 aaKnown RBP7.18□□□□□ -1.26
LSC1YOR142W PIG1Q06216 648 aa7.18□□□□□ -1.26
LSC1YOR142W RGA2Q06407 1009 aa7.18□□□□□ -1.26
LSC1YOR142W IWR1Q07532 353 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 35.5 ms