RNA–Protein interactions for RNA: YOR075W

UFE1, Transcript of t-SNARE protein required for retrograde vesicular traffic, yeast

Gene UFE1, Length 1,041 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UFE1	YOR075W	YBR182C-A	Q8TGU6	64 aa		5.27	□□□□□ -1.57
UFE1	YOR075W	CDC9	P04819	755 aa		5.26	□□□□□ -1.57
UFE1	YOR075W	HCM1	P25364	564 aa		5.26	□□□□□ -1.57
UFE1	YOR075W	SEC21	P32074	935 aa	Known RBP	5.26	□□□□□ -1.57
UFE1	YOR075W	ALY2	P47029	1046 aa		5.26	□□□□□ -1.57
UFE1	YOR075W	SWM1	Q12379	170 aa		5.26	□□□□□ -1.57
UFE1	YOR075W	PFK1	P16861	987 aa	Known RBP	5.25	□□□□□ -1.57
UFE1	YOR075W	VBA3	P25594	458 aa		5.25	□□□□□ -1.57
UFE1	YOR075W	CAF16	P43569	289 aa		5.25	□□□□□ -1.57
UFE1	YOR075W	ASI2	P53895	289 aa		5.25	□□□□□ -1.57
UFE1	YOR075W	URN1	Q06525	465 aa	Known RBP	5.25	□□□□□ -1.57
UFE1	YOR075W	NTO1	Q12311	748 aa		5.25	□□□□□ -1.57
UFE1	YOR075W	CAD1	P24813	409 aa	Known RBP	5.24	□□□□□ -1.57
UFE1	YOR075W	MCD4	P36051	919 aa		5.24	□□□□□ -1.57
UFE1	YOR075W	SNP1	Q00916	300 aa	Predicted RBP	5.24	□□□□□ -1.57
UFE1	YOR075W	SLU7	Q02775	382 aa	Known RBP	5.24	□□□□□ -1.57
UFE1	YOR075W	PEX19	Q07418	342 aa		5.24	□□□□□ -1.57
UFE1	YOR075W	SRD1	P09007	221 aa		5.23	□□□□□ -1.57
UFE1	YOR075W	TUB3	P09734	445 aa	Known RBP	5.23	□□□□□ -1.57
UFE1	YOR075W	SSY5	P47002	699 aa		5.23	□□□□□ -1.57
UFE1	YOR075W	ZIP2	P53061	704 aa		5.23	□□□□□ -1.57
UFE1	YOR075W	UTP14	Q04500	899 aa	Known RBP	5.23	□□□□□ -1.57
UFE1	YOR075W	LAS17	Q12446	633 aa		5.23	□□□□□ -1.57
UFE1	YOR075W	TRM11	Q12463	433 aa		5.23	□□□□□ -1.57
UFE1	YOR075W	PMI40	P29952	429 aa	Known RBP	5.22	□□□□□ -1.57
UFE1	YOR075W	NGG1	P32494	702 aa		5.22	□□□□□ -1.57
UFE1	YOR075W	YEL1	P34225	687 aa		5.22	□□□□□ -1.57
UFE1	YOR075W	RPN10	P38886	268 aa	Known RBP	5.22	□□□□□ -1.57
UFE1	YOR075W	MNN1	P39106	762 aa		5.22	□□□□□ -1.57
UFE1	YOR075W	PZF1	P39933	429 aa		5.22	□□□□□ -1.57
UFE1	YOR075W	PHO23	P50947	330 aa		5.22	□□□□□ -1.57
UFE1	YOR075W	YDR338C	Q05497	695 aa		5.22	□□□□□ -1.57
UFE1	YOR075W	TRM2	P33753	639 aa		5.21	□□□□□ -1.58
UFE1	YOR075W	CTF13	P35203	478 aa		5.21	□□□□□ -1.58
UFE1	YOR075W	FPR3	P38911	411 aa	Known RBP	5.21	□□□□□ -1.58
UFE1	YOR075W	SAK1	P38990	1142 aa		5.21	□□□□□ -1.58
UFE1	YOR075W	MSS4	P38994	779 aa		5.21	□□□□□ -1.58
UFE1	YOR075W	VHR1	P40522	640 aa		5.21	□□□□□ -1.58
UFE1	YOR075W	PKH1	Q03407	766 aa		5.21	□□□□□ -1.58
UFE1	YOR075W	COG8	Q04632	607 aa		5.21	□□□□□ -1.58
UFE1	YOR075W	CRR1	Q05790	422 aa		5.21	□□□□□ -1.58
UFE1	YOR075W	NOP14	Q99207	810 aa	Known RBP	5.21	□□□□□ -1.58
UFE1	YOR075W	TRP4	P07285	380 aa	Predicted RBP	5.2	□□□□□ -1.58
UFE1	YOR075W	HOG1	P32485	435 aa		5.2	□□□□□ -1.58
UFE1	YOR075W	DEF1	P35732	738 aa	Known RBP	5.2	□□□□□ -1.58
UFE1	YOR075W	TFB2	Q02939	513 aa		5.2	□□□□□ -1.58
UFE1	YOR075W	MUS81	Q04149	632 aa	Predicted RBP	5.2	□□□□□ -1.58
UFE1	YOR075W	TUB2	P02557	457 aa	Known RBP	5.19	□□□□□ -1.58
UFE1	YOR075W	RAD18	P10862	487 aa		5.19	□□□□□ -1.58
UFE1	YOR075W	PRP4	P20053	465 aa	Known RBP	5.19	□□□□□ -1.58
UFE1	YOR075W	SFP1	P32432	683 aa		5.19	□□□□□ -1.58
UFE1	YOR075W	PFA3	P42836	336 aa		5.19	□□□□□ -1.58
UFE1	YOR075W	BNA2	P47125	453 aa		5.19	□□□□□ -1.58
UFE1	YOR075W	MTR3	P48240	250 aa	Predicted RBP	5.19	□□□□□ -1.58
UFE1	YOR075W	BUL1	P48524	976 aa		5.19	□□□□□ -1.58
UFE1	YOR075W	ERG5	P54781	538 aa		5.19	□□□□□ -1.58
UFE1	YOR075W	DOS2	P54858	310 aa		5.19	□□□□□ -1.58
UFE1	YOR075W	GSF2	Q04697	403 aa	Known RBP	5.19	□□□□□ -1.58
UFE1	YOR075W	AIM39	Q08223	395 aa		5.19	□□□□□ -1.58
UFE1	YOR075W	YLR415C	O13578	112 aa		5.18	□□□□□ -1.58
UFE1	YOR075W	PCL2	P25693	308 aa		5.18	□□□□□ -1.58
UFE1	YOR075W	HRR25	P29295	494 aa	Known RBP	5.18	□□□□□ -1.58
UFE1	YOR075W	EFT1	P32324	842 aa	Known RBP	5.18	□□□□□ -1.58
UFE1	YOR075W	HSL7	P38274	827 aa		5.18	□□□□□ -1.58
UFE1	YOR075W	SIC1	P38634	284 aa		5.18	□□□□□ -1.58
UFE1	YOR075W	RPP1	P38786	293 aa		5.18	□□□□□ -1.58
UFE1	YOR075W	YFL052W	P43551	465 aa		5.18	□□□□□ -1.58
UFE1	YOR075W	YNL193W	P53870	558 aa		5.18	□□□□□ -1.58
UFE1	YOR075W	NHX1	Q04121	633 aa		5.18	□□□□□ -1.58
UFE1	YOR075W	YLR001C	Q07895	862 aa		5.18	□□□□□ -1.58
UFE1	YOR075W	GPR1	Q12361	961 aa		5.18	□□□□□ -1.58
UFE1	YOR075W	NPY1	P53164	384 aa		5.17	□□□□□ -1.58
UFE1	YOR075W	RPL8A	P17076	256 aa	Known RBP	5.16	□□□□□ -1.58
UFE1	YOR075W	SFL1	P20134	766 aa		5.16	□□□□□ -1.58
UFE1	YOR075W	KTR4	P38131	464 aa		5.16	□□□□□ -1.58
UFE1	YOR075W	DOT6	P40059	670 aa	Known RBP	5.16	□□□□□ -1.58
UFE1	YOR075W	AIM21	P40563	679 aa		5.16	□□□□□ -1.58
UFE1	YOR075W	MSE1	P48525	536 aa		5.16	□□□□□ -1.58
UFE1	YOR075W	NRG1	Q03125	231 aa		5.16	□□□□□ -1.58
UFE1	YOR075W	YLR149C	Q99296	730 aa		5.16	□□□□□ -1.58
UFE1	YOR075W	MET3	P08536	511 aa		5.15	□□□□□ -1.59
UFE1	YOR075W	MIH1	P23748	554 aa		5.15	□□□□□ -1.59
UFE1	YOR075W	PCM1	P38628	557 aa	Known RBP	5.15	□□□□□ -1.59
UFE1	YOR075W	ATG33	Q06485	197 aa		5.15	□□□□□ -1.59
UFE1	YOR075W	YGR161W-C	Q3E744	92 aa		5.15	□□□□□ -1.59
UFE1	YOR075W	HMG1	P12683	1054 aa		5.14	□□□□□ -1.59
UFE1	YOR075W	ERG4	P25340	473 aa		5.14	□□□□□ -1.59
UFE1	YOR075W	YKR051W	P36142	418 aa		5.14	□□□□□ -1.59
UFE1	YOR075W	BRN1	P38170	754 aa		5.14	□□□□□ -1.59
UFE1	YOR075W	ECM1	P39715	212 aa		5.14	□□□□□ -1.59
UFE1	YOR075W	FKH2	P41813	862 aa		5.14	□□□□□ -1.59
UFE1	YOR075W	YBP2	P53169	641 aa		5.14	□□□□□ -1.59
UFE1	YOR075W	DLT1	Q04216	342 aa		5.14	□□□□□ -1.59
UFE1	YOR075W	ASM4	Q05166	528 aa		5.14	□□□□□ -1.59
UFE1	YOR075W	RPN7	Q06103	429 aa	Known RBP	5.14	□□□□□ -1.59
UFE1	YOR075W	PUS9	Q12069	462 aa		5.14	□□□□□ -1.59
UFE1	YOR075W	SPC42	P36094	363 aa		5.13	□□□□□ -1.59
UFE1	YOR075W	YKR018C	P36114	725 aa		5.13	□□□□□ -1.59
UFE1	YOR075W	YBR259W	P38338	688 aa		5.13	□□□□□ -1.59
UFE1	YOR075W	MGS1	P40151	587 aa		5.13	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms