RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP6	YOR001W	URA1	P28272	314 aa	Predicted RBP	2.62	□□□□□ -1.99
RRP6	YOR001W	MNN4	P36044	1178 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	ABZ1	P37254	787 aa	Predicted RBP	2.62	□□□□□ -1.99
RRP6	YOR001W	RRT14	P40470	206 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	HIS6	P40545	261 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	RLP7	P40693	322 aa	Known RBP	2.62	□□□□□ -1.99
RRP6	YOR001W	ERR3	P42222	437 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	PAP2	P53632	584 aa	Known RBP	2.62	□□□□□ -1.99
RRP6	YOR001W	DSE4	P53753	1117 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	CNM67	P53865	581 aa	Known RBP	2.62	□□□□□ -1.99
RRP6	YOR001W	TPP1	Q03796	238 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	PEX15	Q08215	383 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	YOR059C	Q08448	450 aa	Known RBP	2.62	□□□□□ -1.99
RRP6	YOR001W	GPR1	Q12361	961 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	AI3	P03877	415 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	CYS3	P31373	394 aa	Known RBP	2.62	□□□□□ -1.99
RRP6	YOR001W	HSL7	P38274	827 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	TDA3	P38758	523 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	YAP1801	P38856	637 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	PIK1	P39104	1066 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	ACA1	P39970	489 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	HOS4	P40480	1083 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	ALY2	P47029	1046 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	NIT3	P49954	291 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	MDG1	P53885	366 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	SDH1	Q00711	640 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	TRS130	Q03660	1102 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	GAS5	Q08193	484 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	SSP2	Q08646	371 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	YOL087C	Q99247	1116 aa		2.62	□□□□□ -1.99
RRP6	YOR001W	ENA1	P13587	1091 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	NFU1	P32860	256 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	YKL133C	P36066	463 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	YKR018C	P36114	725 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	ECM21	P38167	1117 aa	Known RBP	2.61	□□□□□ -1.99
RRP6	YOR001W	VPS27	P40343	622 aa	Known RBP	2.61	□□□□□ -1.99
RRP6	YOR001W	SAP185	P40856	1058 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	PUS4	P48567	403 aa	Known RBP	2.61	□□□□□ -1.99
RRP6	YOR001W	ARI1	P53111	347 aa	Known RBP	2.61	□□□□□ -1.99
RRP6	YOR001W	ENA2	Q01896	1091 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	PSR2	Q07949	397 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	YPR027C	Q12079	277 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
RRP6	YOR001W	ENA5	Q12691	1091 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	FBP1	P09201	348 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	SWI6	P09959	803 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	RPS4A	P0CX35	261 aa	Known RBP	2.61	□□□□□ -1.99
RRP6	YOR001W	RPS4B	P0CX36	261 aa	Known RBP	2.61	□□□□□ -1.99
RRP6	YOR001W	MRS6	P32864	603 aa	Known RBP	2.61	□□□□□ -1.99
RRP6	YOR001W	MFT1	P33441	392 aa	Known RBP	2.61	□□□□□ -1.99
RRP6	YOR001W	MAL31	P38156	614 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	RIM4	P38741	713 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	BNA2	P47125	453 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	BRE5	P53741	515 aa	Known RBP	2.61	□□□□□ -1.99
RRP6	YOR001W	NOG2	P53742	486 aa	Known RBP	2.61	□□□□□ -1.99
RRP6	YOR001W	LEE1	Q02799	301 aa	Known RBP	2.61	□□□□□ -1.99
RRP6	YOR001W	GIR2	Q03768	265 aa	Predicted RBP	2.61	□□□□□ -1.99
RRP6	YOR001W	HLR1	Q04429	423 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	TFC6	Q06339	672 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	OMS1	Q06668	471 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	HAL9	Q12180	1030 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	YOL114C	Q12322	202 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	YVC1	Q12324	675 aa		2.61	□□□□□ -1.99
RRP6	YOR001W	HSC82	P15108	705 aa	Known RBP	2.6	□□□□□ -1.99
RRP6	YOR001W	HOP1	P20050	605 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	RPN12	P32496	274 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	RPD3	P32561	433 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	STE13	P33894	931 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	PTH2	P34222	208 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	SSZ1	P38788	538 aa	Known RBP	2.6	□□□□□ -1.99
RRP6	YOR001W	NOC2	P39744	710 aa	Known RBP	2.6	□□□□□ -1.99
RRP6	YOR001W	EAF5	P39995	279 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	YJR039W	P47107	1121 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	SLD3	P53135	668 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	ESF2	P53743	316 aa	Known RBP	2.6	□□□□□ -1.99
RRP6	YOR001W	YHM2	Q04013	314 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	GFA1	P14742	717 aa	Known RBP	2.6	□□□□□ -1.99
RRP6	YOR001W	SSH4	P32343	579 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	RPC82	P32349	654 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	YKU70	P32807	602 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	KAE1	P36132	386 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	OMA1	P36163	345 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	RPN10	P38886	268 aa	Known RBP	2.6	□□□□□ -1.99
RRP6	YOR001W	BEM4	P39011	633 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	EMP65	P40085	556 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	AIM21	P40563	679 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	BNA1	P47096	177 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	GTR1	Q00582	310 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	YKR011C	Q02209	353 aa		2.6	□□□□□ -1.99
RRP6	YOR001W	COQ4	O13525	335 aa		2.59	□□□□□ -1.99
RRP6	YOR001W	NOT3	P06102	836 aa	Known RBP	2.59	□□□□□ -1.99
RRP6	YOR001W	GLN4	P13188	809 aa	Known RBP	2.59	□□□□□ -1.99
RRP6	YOR001W	SRO9	P25567	434 aa	Known RBP	2.59	□□□□□ -1.99
RRP6	YOR001W	SEC65	P29478	273 aa		2.59	□□□□□ -1.99
RRP6	YOR001W	MCM10	P32354	571 aa		2.59	□□□□□ -1.99
RRP6	YOR001W	SET5	P38890	526 aa	Known RBP	2.59	□□□□□ -1.99
RRP6	YOR001W	SPC72	P39723	622 aa		2.59	□□□□□ -1.99
RRP6	YOR001W	DOT6	P40059	670 aa	Known RBP	2.59	□□□□□ -1.99
RRP6	YOR001W	IRC5	P43610	853 aa		2.59	□□□□□ -1.99
RRP6	YOR001W	UBA2	P52488	636 aa		2.59	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms