RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	CYC8	P14922	966 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	RAD53	P22216	821 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	PRP22	P24384	1145 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	TCA17	P32613	152 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	GYP6	P32806	458 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	1.62	□□□□□ -2.15	not detected
SSK2	YNR031C	NUF2	P33895	451 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	PEX28	P38848	579 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	ERP2	P39704	215 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	AIM9	P40053	627 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	COP1	P53622	1201 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	DSL1	P53847	754 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	VPS64	Q03944	604 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	COG4	Q06096	861 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	ARV1	Q06541	321 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	HSP42	Q12329	375 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	NOP14	Q99207	810 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	CIT1	P00890	479 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	TUF1	P02992	437 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	DSF1	P0CX08	502 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	YNR073C	P0CX09	502 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	VMA2	P16140	517 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	VRP1	P37370	817 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	RIM4	P38741	713 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	ACA1	P39970	489 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	YGR153W	P48238	217 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	GYP7	P48365	746 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	PUS4	P48567	403 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	GPI8	P49018	411 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	ADE12	P80210	433 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	STP1	Q00947	519 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	CSM3	Q04659	317 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	RRP15	Q06511	250 aa	Predicted RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	OPT2	Q06593	877 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	CSR1	Q06705	408 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	APC2	Q12440	853 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	ERG12	P07277	443 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	CLN1	P20437	546 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	CHL1	P22516	861 aa	Predicted RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	YCL049C	P25577	312 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	SWC3	P31376	625 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	APN2	P38207	520 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	SHE3	P38272	425 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	SEC26	P41810	973 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	YNL108C	P53929	270 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	CWC21	Q03375	135 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	YLH47	Q06493	454 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	NOP12	Q08208	459 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	RUD3	Q12234	484 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	RUP1	Q12242	671 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	RRP36	Q12481	300 aa	Predicted RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	YIL002W-A	Q3E7Z5	69 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	TRS33	Q99394	268 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	TY4B-P	A0A0B7P3V8	1104 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	HSC82	P15108	705 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	SUI2	P20459	304 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	KRR1	P25586	316 aa	Predicted RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	GUT1	P32190	709 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	YBP1	P38315	674 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	TDA3	P38758	523 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	GGA2	P38817	585 aa	Known RBP	1.62	□□□□□ -2.15
SSK2	YNR031C	BUD16	P39988	312 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	YFR018C	P43599	363 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	BNA1	P47096	177 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	MRK1	P50873	501 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	SPO1	P53541	631 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	ARP4	P80428	489 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	NSE5	Q03718	556 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	HLR1	Q04429	423 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	YLR346C	Q06139	101 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	ATG26	Q06321	1198 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	ENB1	Q08299	606 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	GLE1	Q12315	538 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	YRM1	Q12340	786 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	RKM4	Q12504	494 aa		1.62	□□□□□ -2.15
SSK2	YNR031C	MPH2	P0CD99	609 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	BCK2	P33306	851 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	STO1	P34160	861 aa	Known RBP	1.61	□□□□□ -2.15
SSK2	YNR031C	GLY1	P37303	387 aa	Known RBP	1.61	□□□□□ -2.15
SSK2	YNR031C	TBS1	P38114	1094 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	EHT1	P38295	451 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	YAP1801	P38856	637 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	ALD5	P40047	520 aa	Known RBP	1.61	□□□□□ -2.15
SSK2	YNR031C	IES5	P40060	125 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	VID27	P40157	782 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	BRE2	P43132	505 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	DAK2	P43550	591 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	MDR1	P53258	950 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	HOL1	P53389	586 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	HOS3	Q02959	697 aa	Known RBP	1.61	□□□□□ -2.15
SSK2	YNR031C	HOT1	Q03213	719 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	VTI1	Q04338	217 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	RNH1	Q04740	348 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	YDR338C	Q05497	695 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	RVB2	Q12464	471 aa	Known RBP	1.61	□□□□□ -2.15
SSK2	YNR031C	ACC1	Q00955	2233 aa	Known RBP	1.61	□□□□□ -2.15
SSK2	YNR031C	NAT1	P12945	854 aa	Known RBP	1.61	□□□□□ -2.15
SSK2	YNR031C	ATE1	P16639	503 aa		1.61	□□□□□ -2.15
SSK2	YNR031C	PFK1	P16861	987 aa	Known RBP	1.61	□□□□□ -2.15
SSK2	YNR031C	TSR4	P25040	408 aa		1.61	□□□□□ -2.15

Retrieved 100 of 5,963 RNA–protein pairs in 71.6 ms