RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W AGE1Q04412 482 aa5.65□□□□□ -1.5
SPG4YMR107W ARR1Q06596 294 aa5.65□□□□□ -1.5
SPG4YMR107W CSR1Q06705 408 aaKnown RBP5.65□□□□□ -1.5
SPG4YMR107W CHS5Q12114 671 aaKnown RBP5.65□□□□□ -1.5
SPG4YMR107W YRF1-3P0CX14 1859 aa5.64□□□□□ -1.51
SPG4YMR107W YRF1-7P0CX15 1859 aa5.64□□□□□ -1.51
SPG4YMR107W YRF1-6P53819 1859 aa5.64□□□□□ -1.51
SPG4YMR107W YPR089WO13585 888 aa5.64□□□□□ -1.51
SPG4YMR107W KIN1P13185 1064 aa5.64□□□□□ -1.51
SPG4YMR107W YAK1P14680 807 aa5.64□□□□□ -1.51
SPG4YMR107W ISY1P21374 235 aaPredicted RBP5.64□□□□□ -1.51
SPG4YMR107W VMA4P22203 233 aaKnown RBP5.64□□□□□ -1.51
SPG4YMR107W SLY41P22215 453 aa5.64□□□□□ -1.51
SPG4YMR107W VPH2P32341 215 aa5.64□□□□□ -1.51
SPG4YMR107W KES1P35844 434 aaKnown RBP5.64□□□□□ -1.51
SPG4YMR107W OCT1P35999 772 aa5.64□□□□□ -1.51
SPG4YMR107W RCN1P36054 211 aa5.64□□□□□ -1.51
SPG4YMR107W PPS1P38148 807 aa5.64□□□□□ -1.51
SPG4YMR107W RFC3P38629 340 aa5.64□□□□□ -1.51
SPG4YMR107W ARB1P40024 610 aaKnown RBP5.64□□□□□ -1.51
SPG4YMR107W PEA2P40091 420 aa5.64□□□□□ -1.51
SPG4YMR107W MMM1P41800 426 aa5.64□□□□□ -1.51
SPG4YMR107W EMW1P42842 904 aaKnown RBP5.64□□□□□ -1.51
SPG4YMR107W DAS1P47005 663 aa5.64□□□□□ -1.51
SPG4YMR107W KAP114P53067 1004 aa5.64□□□□□ -1.51
SPG4YMR107W YNL144CP53907 740 aa5.64□□□□□ -1.51
SPG4YMR107W ALD6P54115 500 aaKnown RBP5.64□□□□□ -1.51
SPG4YMR107W MEC3Q02574 474 aa5.64□□□□□ -1.51
SPG4YMR107W RPM2Q02773 1202 aa5.64□□□□□ -1.51
SPG4YMR107W EEB1Q02891 456 aa5.64□□□□□ -1.51
SPG4YMR107W MSH6Q03834 1242 aa5.64□□□□□ -1.51
SPG4YMR107W GGA1Q06336 557 aa5.64□□□□□ -1.51
SPG4YMR107W YLH47Q06493 454 aa5.64□□□□□ -1.51
SPG4YMR107W PSR2Q07949 397 aa5.64□□□□□ -1.51
SPG4YMR107W HEM15P16622 393 aa5.63□□□□□ -1.51
SPG4YMR107W CBF1P17106 351 aa5.63□□□□□ -1.51
SPG4YMR107W THR1P17423 357 aaKnown RBP5.63□□□□□ -1.51
SPG4YMR107W PLC1P32383 869 aa5.63□□□□□ -1.51
SPG4YMR107W GCD6P32501 712 aaKnown RBP5.63□□□□□ -1.51
SPG4YMR107W NIP100P33420 868 aa5.63□□□□□ -1.51
SPG4YMR107W YBL055CP34220 418 aaPredicted RBP5.63□□□□□ -1.51
SPG4YMR107W STN1P38960 494 aa5.63□□□□□ -1.51
SPG4YMR107W JEM1P40358 645 aa5.63□□□□□ -1.51
SPG4YMR107W XKS1P42826 600 aa5.63□□□□□ -1.51
SPG4YMR107W FMS1P50264 508 aa5.63□□□□□ -1.51
SPG4YMR107W MCM6P53091 1017 aaKnown RBP5.63□□□□□ -1.51
SPG4YMR107W YGR054WP53235 642 aaKnown RBP5.63□□□□□ -1.51
SPG4YMR107W SQS1P53866 767 aaKnown RBP5.63□□□□□ -1.51
SPG4YMR107W RPS15Q01855 142 aaKnown RBP5.63□□□□□ -1.51
SPG4YMR107W FMN1Q03778 218 aa5.63□□□□□ -1.51
SPG4YMR107W OPY2Q06810 360 aa5.63□□□□□ -1.51
SPG4YMR107W LSO1Q3E827 93 aa5.63□□□□□ -1.51
SPG4YMR107W TRP2P00899 507 aaKnown RBP5.62□□□□□ -1.51
SPG4YMR107W SBP1P10080 294 aaKnown RBP5.62□□□□□ -1.51
SPG4YMR107W MCM1P11746 286 aa5.62□□□□□ -1.51
SPG4YMR107W BUD23P25627 275 aaPredicted RBP5.62□□□□□ -1.51
SPG4YMR107W MCM5P29496 775 aaKnown RBP5.62□□□□□ -1.51
SPG4YMR107W GLN1P32288 370 aaKnown RBP5.62□□□□□ -1.51
SPG4YMR107W CDC3P32457 520 aaKnown RBP5.62□□□□□ -1.51
SPG4YMR107W EFB1P32471 206 aaKnown RBP5.62□□□□□ -1.51
SPG4YMR107W CBF2P32504 956 aa5.62□□□□□ -1.51
SPG4YMR107W YKL091CP33324 310 aaKnown RBP5.62□□□□□ -1.51
SPG4YMR107W EXO84P38261 753 aa5.62□□□□□ -1.51
SPG4YMR107W ERC1P38767 581 aa5.62□□□□□ -1.51
SPG4YMR107W ERP5P38819 212 aa5.62□□□□□ -1.51
SPG4YMR107W OAF1P39720 1047 aaPredicted RBP5.62□□□□□ -1.51
SPG4YMR107W TIF4631P39935 952 aaKnown RBP5.62□□□□□ -1.51
SPG4YMR107W ALG5P40350 334 aa5.62□□□□□ -1.51
SPG4YMR107W PFK26P40433 827 aaKnown RBP5.62□□□□□ -1.51
SPG4YMR107W CSM2P40465 213 aa5.62□□□□□ -1.51
SPG4YMR107W IRR1P40541 1150 aa5.62□□□□□ -1.51
SPG4YMR107W YFL034WP43564 1073 aa5.62□□□□□ -1.51
SPG4YMR107W TAF1P46677 1066 aa5.62□□□□□ -1.51
SPG4YMR107W IMD4P50094 524 aaKnown RBP5.62□□□□□ -1.51
SPG4YMR107W ATG1P53104 897 aa5.62□□□□□ -1.51
SPG4YMR107W MAK10Q02197 733 aa5.62□□□□□ -1.51
SPG4YMR107W MTG1Q03151 367 aaPredicted RBP5.62□□□□□ -1.51
SPG4YMR107W SPO71Q03868 1245 aa5.62□□□□□ -1.51
SPG4YMR107W MYO5Q04439 1219 aaKnown RBP5.62□□□□□ -1.51
SPG4YMR107W UTP14Q04500 899 aaKnown RBP5.62□□□□□ -1.51
SPG4YMR107W YPQ2Q06328 317 aa5.62□□□□□ -1.51
SPG4YMR107W NOC3Q07896 663 aaPredicted RBP5.62□□□□□ -1.51
SPG4YMR107W TYW1Q08960 810 aaKnown RBP5.62□□□□□ -1.51
SPG4YMR107W MSH5Q12175 901 aa5.62□□□□□ -1.51
SPG4YMR107W MMP1Q12372 583 aa5.62□□□□□ -1.51
SPG4YMR107W MDM20Q12387 796 aaKnown RBP5.62□□□□□ -1.51
SPG4YMR107W MET6P05694 767 aaKnown RBP5.61□□□□□ -1.51
SPG4YMR107W MIP1P15801 1254 aa5.61□□□□□ -1.51
SPG4YMR107W URA4P20051 364 aa5.61□□□□□ -1.51
SPG4YMR107W PRP5P21372 849 aaPredicted RBP5.61□□□□□ -1.51
SPG4YMR107W ESS1P22696 170 aa5.61□□□□□ -1.51
SPG4YMR107W KIP1P28742 1111 aa5.61□□□□□ -1.51
SPG4YMR107W MET4P32389 672 aa5.61□□□□□ -1.51
SPG4YMR107W EUG1P32474 517 aa5.61□□□□□ -1.51
SPG4YMR107W RPN2P32565 945 aaKnown RBP5.61□□□□□ -1.51
SPG4YMR107W UTP11P34247 250 aaPredicted RBP5.61□□□□□ -1.51
SPG4YMR107W TSC10P38342 320 aa5.61□□□□□ -1.51
SPG4YMR107W SIP3P38717 1229 aa5.61□□□□□ -1.51
SPG4YMR107W YHL050CP38721 697 aa5.61□□□□□ -1.51
SPG4YMR107W BRL1P38770 471 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms