RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W GIS1Q03833 894 aa2.57□□□□□ -2
CFT2YLR115W PPM2Q08282 695 aa2.57□□□□□ -2
CFT2YLR115W SPT6P23615 1451 aaKnown RBP2.57□□□□□ -2
CFT2YLR115W CYS3P31373 394 aaKnown RBP2.56□□□□□ -2
CFT2YLR115W EMC3P36039 253 aa2.56□□□□□ -2
CFT2YLR115W YHR078WP38799 552 aa2.56□□□□□ -2
CFT2YLR115W DUS1P53759 423 aaKnown RBP2.56□□□□□ -2
CFT2YLR115W LRS4Q04087 347 aaKnown RBP2.56□□□□□ -2
CFT2YLR115W TRM11Q12463 433 aa2.56□□□□□ -2
CFT2YLR115W BRN1P38170 754 aa2.56□□□□□ -2
CFT2YLR115W VHR1P40522 640 aa2.56□□□□□ -2
CFT2YLR115W HXT16P47185 567 aa2.56□□□□□ -2
CFT2YLR115W TAD1P53065 400 aa2.56□□□□□ -2
CFT2YLR115W RNT1Q02555 471 aa2.56□□□□□ -2
CFT2YLR115W NUM1Q00402 2748 aa2.56□□□□□ -2
CFT2YLR115W NTE1Q04958 1679 aa2.56□□□□□ -2
CFT2YLR115W DAL7P21826 554 aa2.55□□□□□ -2
CFT2YLR115W RPP1P38786 293 aa2.55□□□□□ -2
CFT2YLR115W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
CFT2YLR115W NOG2P53742 486 aaKnown RBP2.55□□□□□ -2
CFT2YLR115W ASI2P53895 289 aa2.55□□□□□ -2
CFT2YLR115W MUS81Q04149 632 aaPredicted RBP2.55□□□□□ -2
CFT2YLR115W THI21Q08975 551 aa2.55□□□□□ -2
CFT2YLR115W SWM1Q12379 170 aa2.55□□□□□ -2
CFT2YLR115W PPR1P07272 904 aaPredicted RBP2.55□□□□□ -2
CFT2YLR115W ALG7P07286 448 aa2.55□□□□□ -2
CFT2YLR115W HUL4P40985 892 aa2.55□□□□□ -2
CFT2YLR115W MUK1Q02866 612 aa2.55□□□□□ -2
CFT2YLR115W VPS72Q03388 795 aa2.55□□□□□ -2
CFT2YLR115W NSE3Q05541 303 aa2.55□□□□□ -2
CFT2YLR115W YDL124WQ07551 312 aaKnown RBP2.55□□□□□ -2
CFT2YLR115W YOR022CQ12204 715 aa2.55□□□□□ -2
CFT2YLR115W YBR182C-AQ8TGU6 64 aa2.55□□□□□ -2
CFT2YLR115W RPS9AO13516 197 aaKnown RBP2.55□□□□□ -2
CFT2YLR115W YBR053CP38235 358 aa2.55□□□□□ -2
CFT2YLR115W GGA2P38817 585 aaKnown RBP2.55□□□□□ -2
CFT2YLR115W STB4P50104 949 aa2.55□□□□□ -2
CFT2YLR115W MAL11P53048 616 aa2.55□□□□□ -2
CFT2YLR115W OMS1Q06668 471 aa2.55□□□□□ -2
CFT2YLR115W NIT3P49954 291 aa2.54□□□□□ -2
CFT2YLR115W RTS3P53289 263 aa2.54□□□□□ -2
CFT2YLR115W ATP25Q03153 612 aa2.54□□□□□ -2
CFT2YLR115W TMN2Q04562 672 aa2.54□□□□□ -2
CFT2YLR115W TAF2P23255 1407 aa2.54□□□□□ -2
CFT2YLR115W SGS1P35187 1447 aa2.54□□□□□ -2
CFT2YLR115W TOM70P07213 617 aaKnown RBP2.54□□□□□ -2
CFT2YLR115W SPC29P33419 253 aa2.54□□□□□ -2
CFT2YLR115W NUG1P40010 520 aaKnown RBP2.54□□□□□ -2
CFT2YLR115W ELO3P40319 345 aa2.54□□□□□ -2
CFT2YLR115W ALG2P43636 503 aa2.54□□□□□ -2
CFT2YLR115W YMR206WQ03695 313 aa2.54□□□□□ -2
CFT2YLR115W FRE5Q08908 694 aa2.54□□□□□ -2
CFT2YLR115W FKH2P41813 862 aa2.53□□□□□ -2
CFT2YLR115W PFA3P42836 336 aa2.53□□□□□ -2
CFT2YLR115W SSY5P47002 699 aa2.53□□□□□ -2
CFT2YLR115W PUS2P53167 370 aa2.53□□□□□ -2
CFT2YLR115W DAM1P53267 343 aa2.53□□□□□ -2
CFT2YLR115W DLT1Q04216 342 aa2.53□□□□□ -2
CFT2YLR115W ASM4Q05166 528 aa2.53□□□□□ -2
CFT2YLR115W ADY4Q05955 493 aa2.53□□□□□ -2
CFT2YLR115W SCT1P32784 759 aa2.53□□□□□ -2.01
CFT2YLR115W PPS1P38148 807 aa2.53□□□□□ -2.01
CFT2YLR115W SAK1P38990 1142 aa2.53□□□□□ -2.01
CFT2YLR115W MET7Q08645 548 aa2.53□□□□□ -2.01
CFT2YLR115W MCH5Q08777 521 aa2.53□□□□□ -2.01
CFT2YLR115W RKR1Q04781 1562 aa2.52□□□□□ -2.01
CFT2YLR115W PRC1P00729 532 aa2.52□□□□□ -2.01
CFT2YLR115W PHR1P05066 565 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
CFT2YLR115W STI1P15705 589 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
CFT2YLR115W MUP1P50276 574 aa2.52□□□□□ -2.01
CFT2YLR115W CDC53Q12018 815 aaKnown RBP2.52□□□□□ -2.01
CFT2YLR115W ACF2Q12168 779 aa2.52□□□□□ -2.01
CFT2YLR115W ERR1P0CX10 437 aa2.52□□□□□ -2.01
CFT2YLR115W ERR2P0CX11 437 aa2.52□□□□□ -2.01
CFT2YLR115W MNN4P36044 1178 aa2.52□□□□□ -2.01
CFT2YLR115W OCA5P38738 679 aa2.52□□□□□ -2.01
CFT2YLR115W QRI1P43123 477 aaKnown RBP2.52□□□□□ -2.01
CFT2YLR115W YJL163CP46996 555 aa2.52□□□□□ -2.01
CFT2YLR115W PKH1Q03407 766 aa2.52□□□□□ -2.01
CFT2YLR115W YDR338CQ05497 695 aa2.52□□□□□ -2.01
CFT2YLR115W PDR15Q04182 1529 aaKnown RBP2.51□□□□□ -2.01
CFT2YLR115W YLR415CO13578 112 aa2.51□□□□□ -2.01
CFT2YLR115W CAF20P12962 161 aaKnown RBP2.51□□□□□ -2.01
CFT2YLR115W PZF1P39933 429 aa2.51□□□□□ -2.01
CFT2YLR115W RLP7P40693 322 aaKnown RBP2.51□□□□□ -2.01
CFT2YLR115W BUD6P41697 788 aa2.51□□□□□ -2.01
CFT2YLR115W RPN4Q03465 531 aa2.51□□□□□ -2.01
CFT2YLR115W REH1Q06709 432 aa2.51□□□□□ -2.01
CFT2YLR115W YTA7P40340 1379 aa2.51□□□□□ -2.01
CFT2YLR115W MET3P08536 511 aa2.51□□□□□ -2.01
CFT2YLR115W SIC1P38634 284 aa2.51□□□□□ -2.01
CFT2YLR115W SET5P38890 526 aaKnown RBP2.51□□□□□ -2.01
CFT2YLR115W GDH3P39708 457 aa2.51□□□□□ -2.01
CFT2YLR115W HOS4P40480 1083 aa2.51□□□□□ -2.01
CFT2YLR115W NNF1P47149 201 aa2.51□□□□□ -2.01
CFT2YLR115W ZIP2P53061 704 aa2.51□□□□□ -2.01
CFT2YLR115W YDR514CQ04408 483 aa2.51□□□□□ -2.01
CFT2YLR115W RSC3Q06639 885 aa2.51□□□□□ -2.01
CFT2YLR115W YOL098CQ12496 1037 aa2.51□□□□□ -2.01
CFT2YLR115W ATG2P53855 1592 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms