RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	YKL091C	P33324	310 aa	Known RBP	3.7	□□□□□ -1.82
SPE1	YKL184W	OAR1	P35731	278 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	SLU7	Q02775	382 aa	Known RBP	3.7	□□□□□ -1.82
SPE1	YKL184W	ATP25	Q03153	612 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	LRS4	Q04087	347 aa	Known RBP	3.7	□□□□□ -1.82
SPE1	YKL184W	ACF2	Q12168	779 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	PPR1	P07272	904 aa	Predicted RBP	3.7	□□□□□ -1.82
SPE1	YKL184W	TUB3	P09734	445 aa	Known RBP	3.7	□□□□□ -1.82
SPE1	YKL184W	RAD53	P22216	821 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	YCL002C	P25565	263 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	SPC29	P33419	253 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	MOH1	P38191	138 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	ELO3	P40319	345 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	RLP7	P40693	322 aa	Known RBP	3.7	□□□□□ -1.82
SPE1	YKL184W	FKH2	P41813	862 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	BUL1	P48524	976 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	AMA1	P50082	593 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	RTA1	P53047	317 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	ASI2	P53895	289 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	YMR206W	Q03695	313 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	PPM2	Q08282	695 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	MCH5	Q08777	521 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	DAS1	P47005	663 aa		3.69	□□□□□ -1.82
SPE1	YKL184W	MTR3	P48240	250 aa	Predicted RBP	3.69	□□□□□ -1.82
SPE1	YKL184W	HSV2	P50079	448 aa	Predicted RBP	3.69	□□□□□ -1.82
SPE1	YKL184W	MUS81	Q04149	632 aa	Predicted RBP	3.69	□□□□□ -1.82
SPE1	YKL184W	CRR1	Q05790	422 aa		3.69	□□□□□ -1.82
SPE1	YKL184W	OMS1	Q06668	471 aa		3.69	□□□□□ -1.82
SPE1	YKL184W	FRE5	Q08908	694 aa		3.69	□□□□□ -1.82
SPE1	YKL184W	ALY2	P47029	1046 aa		3.68	□□□□□ -1.82
SPE1	YKL184W	YBP2	P53169	641 aa		3.68	□□□□□ -1.82
SPE1	YKL184W	ERG5	P54781	538 aa		3.68	□□□□□ -1.82
SPE1	YKL184W	NRG1	Q03125	231 aa		3.68	□□□□□ -1.82
SPE1	YKL184W	YLR415C	O13578	112 aa		3.67	□□□□□ -1.82
SPE1	YKL184W	PER1	P25625	357 aa		3.67	□□□□□ -1.82
SPE1	YKL184W	RPN10	P38886	268 aa	Known RBP	3.67	□□□□□ -1.82
SPE1	YKL184W	GDH3	P39708	457 aa		3.67	□□□□□ -1.82
SPE1	YKL184W	OSW7	P43611	510 aa		3.67	□□□□□ -1.82
SPE1	YKL184W	RPN4	Q03465	531 aa		3.67	□□□□□ -1.82
SPE1	YKL184W	THI21	Q08975	551 aa		3.67	□□□□□ -1.82
SPE1	YKL184W	YBR182C-A	Q8TGU6	64 aa		3.67	□□□□□ -1.82
SPE1	YKL184W	GSY1	P23337	708 aa		3.66	□□□□□ -1.82
SPE1	YKL184W	PFA3	P42836	336 aa		3.66	□□□□□ -1.82
SPE1	YKL184W	STU2	P46675	888 aa		3.66	□□□□□ -1.82
SPE1	YKL184W	STB4	P50104	949 aa		3.66	□□□□□ -1.82
SPE1	YKL184W	MUP1	P50276	574 aa		3.66	□□□□□ -1.82
SPE1	YKL184W	ZIP2	P53061	704 aa		3.66	□□□□□ -1.82
SPE1	YKL184W	HBT1	Q07653	1046 aa	Known RBP	3.66	□□□□□ -1.82
SPE1	YKL184W	YLR125W	Q12138	136 aa		3.66	□□□□□ -1.82
SPE1	YKL184W	YBR259W	P38338	688 aa		3.65	□□□□□ -1.83
SPE1	YKL184W	YIR042C	P40586	236 aa		3.65	□□□□□ -1.83
SPE1	YKL184W	YFL052W	P43551	465 aa		3.65	□□□□□ -1.83
SPE1	YKL184W	ADY4	Q05955	493 aa		3.65	□□□□□ -1.83
SPE1	YKL184W	TAD3	Q9URQ3	322 aa		3.65	□□□□□ -1.83
SPE1	YKL184W	PRP4	P20053	465 aa	Known RBP	3.64	□□□□□ -1.83
SPE1	YKL184W	STO1	P34160	861 aa	Known RBP	3.64	□□□□□ -1.83
SPE1	YKL184W	OCA5	P38738	679 aa		3.64	□□□□□ -1.83
SPE1	YKL184W	YHL017W	P38745	532 aa		3.64	□□□□□ -1.83
SPE1	YKL184W	ORC1	P54784	914 aa	Predicted RBP	3.64	□□□□□ -1.83
SPE1	YKL184W	ORC4	P54791	529 aa		3.64	□□□□□ -1.83
SPE1	YKL184W	TRM13	Q12383	476 aa		3.64	□□□□□ -1.83
SPE1	YKL184W	ERR1	P0CX10	437 aa		3.63	□□□□□ -1.83
SPE1	YKL184W	ERR2	P0CX11	437 aa		3.63	□□□□□ -1.83
SPE1	YKL184W	PHO8	P11491	566 aa		3.63	□□□□□ -1.83
SPE1	YKL184W	LAT1	P12695	482 aa	Known RBP	3.63	□□□□□ -1.83
SPE1	YKL184W	TIM23	P32897	222 aa		3.63	□□□□□ -1.83
SPE1	YKL184W	PPS1	P38148	807 aa		3.63	□□□□□ -1.83
SPE1	YKL184W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	3.63	□□□□□ -1.83	not detected
SPE1	YKL184W	NUP82	P40368	713 aa		3.63	□□□□□ -1.83
SPE1	YKL184W	YJL163C	P46996	555 aa		3.63	□□□□□ -1.83
SPE1	YKL184W	MRPS35	P53292	345 aa		3.63	□□□□□ -1.83
SPE1	YKL184W	GAD1	Q04792	585 aa		3.63	□□□□□ -1.83
SPE1	YKL184W	ATG11	Q12527	1178 aa		3.63	□□□□□ -1.83
SPE1	YKL184W	HIS7	P33734	552 aa	Known RBP	3.62	□□□□□ -1.83
SPE1	YKL184W	APT2	P36973	181 aa		3.62	□□□□□ -1.83
SPE1	YKL184W	DSS1	P39112	969 aa		3.62	□□□□□ -1.83
SPE1	YKL184W	NPY1	P53164	384 aa		3.62	□□□□□ -1.83
SPE1	YKL184W	RIA1	P53893	1110 aa		3.62	□□□□□ -1.83
SPE1	YKL184W	TMN2	Q04562	672 aa		3.62	□□□□□ -1.83
SPE1	YKL184W	THI4	P32318	326 aa		3.61	□□□□□ -1.83
SPE1	YKL184W	MTC2	P34246	357 aa		3.61	□□□□□ -1.83
SPE1	YKL184W	YBR053C	P38235	358 aa		3.61	□□□□□ -1.83
SPE1	YKL184W	SIC1	P38634	284 aa		3.61	□□□□□ -1.83
SPE1	YKL184W	HXT16	P47185	567 aa		3.61	□□□□□ -1.83
SPE1	YKL184W	PRP31	P49704	494 aa	Predicted RBP	3.61	□□□□□ -1.83
SPE1	YKL184W	MUK1	Q02866	612 aa		3.61	□□□□□ -1.83
SPE1	YKL184W	TGL5	Q12043	749 aa		3.61	□□□□□ -1.83
SPE1	YKL184W	MDM12	Q92328	271 aa		3.61	□□□□□ -1.83
SPE1	YKL184W	CDC43	P18898	376 aa		3.61	□□□□□ -1.83
SPE1	YKL184W	REV7	P38927	245 aa		3.61	□□□□□ -1.83
SPE1	YKL184W	ECM1	P39715	212 aa		3.61	□□□□□ -1.83
SPE1	YKL184W	BUD6	P41697	788 aa		3.61	□□□□□ -1.83
SPE1	YKL184W	CAF16	P43569	289 aa		3.61	□□□□□ -1.83
SPE1	YKL184W	BNA2	P47125	453 aa		3.61	□□□□□ -1.83
SPE1	YKL184W	SNP1	Q00916	300 aa	Predicted RBP	3.61	□□□□□ -1.83
SPE1	YKL184W	GIS1	Q03833	894 aa		3.61	□□□□□ -1.83
SPE1	YKL184W	VBA3	P25594	458 aa		3.6	□□□□□ -1.83
SPE1	YKL184W	MCD4	P36051	919 aa		3.6	□□□□□ -1.83
SPE1	YKL184W	SPC42	P36094	363 aa		3.6	□□□□□ -1.83
SPE1	YKL184W	HSL7	P38274	827 aa		3.6	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms