RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFA1	YKL028W	CNM67	P53865	581 aa	Known RBP	4.99	□□□□□ -1.61
TFA1	YKL028W	DUS3	Q06053	668 aa	Known RBP	4.99	□□□□□ -1.61
TFA1	YKL028W	PEX15	Q08215	383 aa		4.99	□□□□□ -1.61
TFA1	YKL028W	GNT1	Q12096	491 aa		4.99	□□□□□ -1.61
TFA1	YKL028W	SPO21	Q12411	609 aa		4.99	□□□□□ -1.61
TFA1	YKL028W	HSP82	P02829	709 aa	Known RBP	4.98	□□□□□ -1.61
TFA1	YKL028W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.98	□□□□□ -1.61
TFA1	YKL028W	TY1A-DR6	P0CX70	440 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	TY1A-ER1	P0CX71	440 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	TY1A-LR2	P0CX72	440 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	TY1A-PL	P0CX73	440 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	TY1A-JR1	P0CX74	440 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	TY1A-LR3	P0CX75	440 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	TY1A-ML2	P0CX76	440 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	HMG1	P12683	1054 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	COX11	P19516	300 aa	Known RBP	4.98	□□□□□ -1.61
TFA1	YKL028W	RER1	P25560	188 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	AFG2	P32794	780 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	PEX5	P35056	612 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	YKL050C	P35736	922 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	MCD4	P36051	919 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	RGD1	P38339	666 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	NEM1	P38757	446 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	GYP8	P43570	497 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	SGM1	P47166	707 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	AIM14	P53109	570 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	YGR283C	P53336	341 aa	Predicted RBP	4.98	□□□□□ -1.61
TFA1	YKL028W	ECM9	Q02202	377 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	SKY1	Q03656	742 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	RKM2	Q03942	479 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	UTP5	Q04177	643 aa	Known RBP	4.98	□□□□□ -1.61
TFA1	YKL028W	RSC3	Q06639	885 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	GUP2	Q08929	609 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	TY1A-GR1	Q12085	440 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	YLL054C	Q12244	843 aa		4.98	□□□□□ -1.61
TFA1	YKL028W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.98	□□□□□ -1.61
TFA1	YKL028W	TY1A-OL	Q92392	440 aa	Known RBP	4.98	□□□□□ -1.61
TFA1	YKL028W	ADE8	P04161	214 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	ENA1	P13587	1091 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	MLS1	P30952	554 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	YRO2	P38079	344 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	PSY4	P38193	441 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	YBR238C	P38330	731 aa	Known RBP	4.97	□□□□□ -1.61
TFA1	YKL028W	GIP4	P39732	760 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	ENA2	Q01896	1091 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	ATP25	Q03153	612 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	RCF1	Q03713	159 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	CIA1	Q05583	330 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	BLS1	Q06071	122 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	SPN1	Q06505	410 aa	Predicted RBP	4.97	□□□□□ -1.61
TFA1	YKL028W	IMH1	Q06704	911 aa	Known RBP	4.97	□□□□□ -1.61
TFA1	YKL028W	ENA5	Q12691	1091 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	SSM4	P40318	1319 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	MRP7	P12687	371 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	SMY2	P32909	740 aa	Known RBP	4.97	□□□□□ -1.61
TFA1	YKL028W	EMC3	P36039	253 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	BCD1	P38772	366 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	DOT6	P40059	670 aa	Known RBP	4.97	□□□□□ -1.61
TFA1	YKL028W	TOK1	P40310	691 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	RET2	P43621	546 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	DAM1	P53267	343 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	YDR338C	Q05497	695 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	SPP382	Q06411	708 aa	Predicted RBP	4.97	□□□□□ -1.61
TFA1	YKL028W	YPR027C	Q12079	277 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	YOL114C	Q12322	202 aa		4.97	□□□□□ -1.61
TFA1	YKL028W	HTS1	P07263	546 aa	Known RBP	4.96	□□□□□ -1.62
TFA1	YKL028W	RPS4A	P0CX35	261 aa	Known RBP	4.96	□□□□□ -1.62
TFA1	YKL028W	RPS4B	P0CX36	261 aa	Known RBP	4.96	□□□□□ -1.62
TFA1	YKL028W	GFA1	P14742	717 aa	Known RBP	4.96	□□□□□ -1.62
TFA1	YKL028W	PET309	P32522	965 aa	Predicted RBP	4.96	□□□□□ -1.62
TFA1	YKL028W	VMA8	P32610	256 aa	Known RBP	4.96	□□□□□ -1.62
TFA1	YKL028W	YKU70	P32807	602 aa		4.96	□□□□□ -1.62
TFA1	YKL028W	AFR1	P33304	620 aa		4.96	□□□□□ -1.62
TFA1	YKL028W	NOP4	P37838	685 aa	Known RBP	4.96	□□□□□ -1.62
TFA1	YKL028W	ALG3	P38179	458 aa		4.96	□□□□□ -1.62
TFA1	YKL028W	PNT1	P38969	423 aa		4.96	□□□□□ -1.62
TFA1	YKL028W	SLS1	P42900	643 aa		4.96	□□□□□ -1.62
TFA1	YKL028W	HOL1	P53389	586 aa		4.96	□□□□□ -1.62
TFA1	YKL028W	EIS1	Q05050	843 aa	Known RBP	4.96	□□□□□ -1.62
TFA1	YKL028W	MET7	Q08645	548 aa		4.96	□□□□□ -1.62
TFA1	YKL028W	SCM3	Q12334	223 aa		4.96	□□□□□ -1.62
TFA1	YKL028W	SEC18	P18759	758 aa	Known RBP	4.95	□□□□□ -1.62
TFA1	YKL028W	SAN1	P22470	610 aa		4.95	□□□□□ -1.62
TFA1	YKL028W	ADP1	P25371	1049 aa		4.95	□□□□□ -1.62
TFA1	YKL028W	ANP1	P32629	500 aa		4.95	□□□□□ -1.62
TFA1	YKL028W	REC104	P33323	182 aa		4.95	□□□□□ -1.62
TFA1	YKL028W	THI80	P35202	319 aa		4.95	□□□□□ -1.62
TFA1	YKL028W	ERT1	P38140	529 aa		4.95	□□□□□ -1.62
TFA1	YKL028W	TDA3	P38758	523 aa		4.95	□□□□□ -1.62
TFA1	YKL028W	RAD26	P40352	1085 aa		4.95	□□□□□ -1.62
TFA1	YKL028W	ALT1	P52893	592 aa		4.95	□□□□□ -1.62
TFA1	YKL028W	CEG1	Q01159	459 aa	Predicted RBP	4.95	□□□□□ -1.62
TFA1	YKL028W	EAR1	Q03212	550 aa		4.95	□□□□□ -1.62
TFA1	YKL028W	ECM38	Q05902	660 aa	Predicted RBP	4.95	□□□□□ -1.62
TFA1	YKL028W	RSC58	Q07979	502 aa		4.95	□□□□□ -1.62
TFA1	YKL028W	CDC60	P26637	1090 aa	Known RBP	4.94	□□□□□ -1.62
TFA1	YKL028W	CCR4	P31384	837 aa	Known RBP	4.94	□□□□□ -1.62
TFA1	YKL028W	CDC12	P32468	407 aa	Known RBP	4.94	□□□□□ -1.62
TFA1	YKL028W	SER1	P33330	395 aa	Known RBP	4.94	□□□□□ -1.62
TFA1	YKL028W	PXA2	P34230	853 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms