RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC80	YIL144W	HSF1	P10961	833 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	ENA1	P13587	1091 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	DAL3	P32459	195 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	YBR071W	P38243	211 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	ENA2	Q01896	1091 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	ROT1	Q03691	256 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	ECM16	Q04217	1267 aa	Known RBP	4.02	□□□□□ -1.77
NDC80	YIL144W	COG8	Q04632	607 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	BRE4	Q07660	1125 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	ADY3	Q07732	790 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	NSI1	Q12457	570 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	ENA5	Q12691	1091 aa		4.02	□□□□□ -1.77
NDC80	YIL144W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
NDC80	YIL144W	OAF1	P39720	1047 aa	Predicted RBP	4.01	□□□□□ -1.77
NDC80	YIL144W	ARP4	P80428	489 aa		4.01	□□□□□ -1.77
NDC80	YIL144W	CRR1	Q05790	422 aa		4.01	□□□□□ -1.77
NDC80	YIL144W	DIF1	O13577	133 aa		4.01	□□□□□ -1.77
NDC80	YIL144W	LRG1	P35688	1017 aa		4.01	□□□□□ -1.77
NDC80	YIL144W	MPE1	P35728	441 aa	Known RBP	4.01	□□□□□ -1.77
NDC80	YIL144W	SET5	P38890	526 aa	Known RBP	4.01	□□□□□ -1.77
NDC80	YIL144W	ERP2	P39704	215 aa		4.01	□□□□□ -1.77
NDC80	YIL144W	DUS1	P53759	423 aa	Known RBP	4.01	□□□□□ -1.77
NDC80	YIL144W	ECM9	Q02202	377 aa		4.01	□□□□□ -1.77
NDC80	YIL144W	HFD1	Q04458	532 aa		4.01	□□□□□ -1.77
NDC80	YIL144W	ASM4	Q05166	528 aa		4.01	□□□□□ -1.77
NDC80	YIL144W	PRC1	P00729	532 aa		4	□□□□□ -1.77
NDC80	YIL144W	SPE1	P08432	466 aa		4	□□□□□ -1.77
NDC80	YIL144W	STE14	P32584	239 aa		4	□□□□□ -1.77
NDC80	YIL144W	HSL7	P38274	827 aa		4	□□□□□ -1.77
NDC80	YIL144W	RPN10	P38886	268 aa	Known RBP	4	□□□□□ -1.77
NDC80	YIL144W	HXT6	P39003	570 aa	Known RBP	4	□□□□□ -1.77
NDC80	YIL144W	HXT7	P39004	570 aa		4	□□□□□ -1.77
NDC80	YIL144W	URM1	P40554	99 aa	Predicted RBP	4	□□□□□ -1.77
NDC80	YIL144W	ZIP2	P53061	704 aa		4	□□□□□ -1.77
NDC80	YIL144W	GIR2	Q03768	265 aa	Predicted RBP	4	□□□□□ -1.77
NDC80	YIL144W	TMA64	Q04600	565 aa	Known RBP	4	□□□□□ -1.77
NDC80	YIL144W	DUS4	Q06063	367 aa		4	□□□□□ -1.77
NDC80	YIL144W	TPO1	Q07824	586 aa		4	□□□□□ -1.77
NDC80	YIL144W	RPS9A	O13516	197 aa	Known RBP	3.99	□□□□□ -1.77
NDC80	YIL144W	RPS21A	P0C0V8	87 aa	Known RBP	3.99	□□□□□ -1.77
NDC80	YIL144W	KAR1	P11927	433 aa		3.99	□□□□□ -1.77
NDC80	YIL144W	PLC1	P32383	869 aa		3.99	□□□□□ -1.77
NDC80	YIL144W	CCT5	P40413	562 aa	Known RBP	3.99	□□□□□ -1.77
NDC80	YIL144W	NIT1	P40447	199 aa		3.99	□□□□□ -1.77
NDC80	YIL144W	AVT1	P47082	602 aa		3.99	□□□□□ -1.77
NDC80	YIL144W	BNA2	P47125	453 aa		3.99	□□□□□ -1.77
NDC80	YIL144W	GTF1	P53260	183 aa	Predicted RBP	3.99	□□□□□ -1.77
NDC80	YIL144W	SLU7	Q02775	382 aa	Known RBP	3.99	□□□□□ -1.77
NDC80	YIL144W	LEE1	Q02799	301 aa	Known RBP	3.99	□□□□□ -1.77
NDC80	YIL144W	DCS2	Q12123	353 aa		3.99	□□□□□ -1.77
NDC80	YIL144W	UPC2	Q12151	913 aa		3.99	□□□□□ -1.77
NDC80	YIL144W	SEC6	P32844	805 aa		3.99	□□□□□ -1.77
NDC80	YIL144W	SAP190	P36123	1033 aa		3.99	□□□□□ -1.77
NDC80	YIL144W	CTF8	P38877	133 aa		3.99	□□□□□ -1.77
NDC80	YIL144W	GPP2	P40106	250 aa	Known RBP	3.99	□□□□□ -1.77
NDC80	YIL144W	SHR5	P41912	237 aa		3.99	□□□□□ -1.77
NDC80	YIL144W	GZF3	P42944	551 aa	Known RBP	3.99	□□□□□ -1.77
NDC80	YIL144W	MET12	P46151	657 aa		3.99	□□□□□ -1.77
NDC80	YIL144W	SVL3	Q03088	825 aa	Known RBP	3.99	□□□□□ -1.77
NDC80	YIL144W	YTM1	Q12024	460 aa	Predicted RBP	3.99	□□□□□ -1.77
NDC80	YIL144W	PRP4	P20053	465 aa	Known RBP	3.98	□□□□□ -1.77
NDC80	YIL144W	YKR018C	P36114	725 aa		3.98	□□□□□ -1.77
NDC80	YIL144W	FLR1	P38124	548 aa		3.98	□□□□□ -1.77
NDC80	YIL144W	RPT2	P40327	437 aa	Known RBP	3.98	□□□□□ -1.77
NDC80	YIL144W	SDP1	P40479	209 aa		3.98	□□□□□ -1.77
NDC80	YIL144W	RPS0B	P46654	252 aa	Known RBP	3.98	□□□□□ -1.77
NDC80	YIL144W	FOL2	P51601	243 aa	Known RBP	3.98	□□□□□ -1.77
NDC80	YIL144W	NPY1	P53164	384 aa		3.98	□□□□□ -1.77
NDC80	YIL144W	ENV11	P53246	860 aa		3.98	□□□□□ -1.77
NDC80	YIL144W	SND1	Q04007	877 aa		3.98	□□□□□ -1.77
NDC80	YIL144W	HMI1	Q12039	706 aa		3.98	□□□□□ -1.77
NDC80	YIL144W	HIF1	Q12373	385 aa		3.98	□□□□□ -1.77
NDC80	YIL144W	RPS21B	Q3E754	87 aa	Known RBP	3.98	□□□□□ -1.77
NDC80	YIL144W	GRX7	P38068	203 aa		3.98	□□□□□ -1.77
NDC80	YIL144W	LAM1	P38851	1228 aa		3.98	□□□□□ -1.77
NDC80	YIL144W	MEF2	P39677	819 aa		3.98	□□□□□ -1.77
NDC80	YIL144W	CHA4	P43634	648 aa		3.98	□□□□□ -1.77
NDC80	YIL144W	NCS6	P53088	359 aa		3.98	□□□□□ -1.77
NDC80	YIL144W	RPN7	Q06103	429 aa	Known RBP	3.98	□□□□□ -1.77
NDC80	YIL144W	SGD1	Q06132	899 aa		3.98	□□□□□ -1.77
NDC80	YIL144W	TUB3	P09734	445 aa	Known RBP	3.97	□□□□□ -1.77
NDC80	YIL144W	SER1	P33330	395 aa	Known RBP	3.97	□□□□□ -1.77
NDC80	YIL144W	TFC4	P33339	1025 aa		3.97	□□□□□ -1.77
NDC80	YIL144W	TSA1	P34760	196 aa	Known RBP	3.97	□□□□□ -1.77
NDC80	YIL144W	FUI1	P38196	639 aa		3.97	□□□□□ -1.77
NDC80	YIL144W	MSS4	P38994	779 aa		3.97	□□□□□ -1.77
NDC80	YIL144W	RET2	P43621	546 aa		3.97	□□□□□ -1.77
NDC80	YIL144W	MNN11	P46985	422 aa	Known RBP	3.97	□□□□□ -1.77
NDC80	YIL144W	SSY5	P47002	699 aa		3.97	□□□□□ -1.77
NDC80	YIL144W	NIT2	P47016	307 aa		3.97	□□□□□ -1.77
NDC80	YIL144W	YNL034W	P53963	612 aa		3.97	□□□□□ -1.77
NDC80	YIL144W	YNL018C	P53976	612 aa		3.97	□□□□□ -1.77
NDC80	YIL144W	DFG16	Q99234	619 aa		3.97	□□□□□ -1.77
NDC80	YIL144W	PWP2	P25635	923 aa	Known RBP	3.96	□□□□□ -1.77
NDC80	YIL144W	POA1	P38218	177 aa		3.96	□□□□□ -1.77
NDC80	YIL144W	DOT6	P40059	670 aa	Known RBP	3.96	□□□□□ -1.77
NDC80	YIL144W	DUG1	P43616	481 aa	Known RBP	3.96	□□□□□ -1.77
NDC80	YIL144W	VPS62	P53285	467 aa		3.96	□□□□□ -1.77
NDC80	YIL144W	BRE5	P53741	515 aa	Known RBP	3.96	□□□□□ -1.77
NDC80	YIL144W	MRPL22	P53881	309 aa		3.96	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms