RNA–Protein interactions for RNA: YIL035C

CKA1, Transcript of Alpha catalytic subunit of casein kinase 2 (CK2), yeast

Gene CKA1, Length 1,119 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKA1	YIL035C	DAM1	P53267	343 aa		4.9	□□□□□ -1.63
CKA1	YIL035C	DLT1	Q04216	342 aa		4.9	□□□□□ -1.63
CKA1	YIL035C	ACF2	Q12168	779 aa		4.9	□□□□□ -1.63
CKA1	YIL035C	PRC1	P00729	532 aa		4.89	□□□□□ -1.63
CKA1	YIL035C	SSY5	P47002	699 aa		4.89	□□□□□ -1.63
CKA1	YIL035C	PKH1	Q03407	766 aa		4.89	□□□□□ -1.63
CKA1	YIL035C	THI21	Q08975	551 aa		4.89	□□□□□ -1.63
CKA1	YIL035C	CAF20	P12962	161 aa	Known RBP	4.88	□□□□□ -1.63
CKA1	YIL035C	PPS1	P38148	807 aa		4.88	□□□□□ -1.63
CKA1	YIL035C	YBR053C	P38235	358 aa		4.88	□□□□□ -1.63
CKA1	YIL035C	SAK1	P38990	1142 aa		4.88	□□□□□ -1.63
CKA1	YIL035C	PFA3	P42836	336 aa		4.88	□□□□□ -1.63
CKA1	YIL035C	MUP1	P50276	574 aa		4.88	□□□□□ -1.63
CKA1	YIL035C	ADY4	Q05955	493 aa		4.88	□□□□□ -1.63
CKA1	YIL035C	GPR1	Q12361	961 aa		4.88	□□□□□ -1.63
CKA1	YIL035C	SAP190	P36123	1033 aa		4.87	□□□□□ -1.63
CKA1	YIL035C	GGA2	P38817	585 aa	Known RBP	4.87	□□□□□ -1.63
CKA1	YIL035C	PZF1	P39933	429 aa		4.87	□□□□□ -1.63
CKA1	YIL035C	TY4A-J	P47023	414 aa		4.87	□□□□□ -1.63
CKA1	YIL035C	HXT16	P47185	567 aa		4.87	□□□□□ -1.63
CKA1	YIL035C	ATP25	Q03153	612 aa		4.87	□□□□□ -1.63
CKA1	YIL035C	NSE3	Q05541	303 aa		4.87	□□□□□ -1.63
CKA1	YIL035C	REH1	Q06709	432 aa		4.87	□□□□□ -1.63
CKA1	YIL035C	MET7	Q08645	548 aa		4.87	□□□□□ -1.63
CKA1	YIL035C	YBR182C-A	Q8TGU6	64 aa		4.87	□□□□□ -1.63
CKA1	YIL035C	YLR415C	O13578	112 aa		4.86	□□□□□ -1.63
CKA1	YIL035C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
CKA1	YIL035C	GAL11	P19659	1081 aa		4.86	□□□□□ -1.63
CKA1	YIL035C	SPC29	P33419	253 aa		4.86	□□□□□ -1.63
CKA1	YIL035C	SET5	P38890	526 aa	Known RBP	4.86	□□□□□ -1.63
CKA1	YIL035C	ASM4	Q05166	528 aa		4.86	□□□□□ -1.63
CKA1	YIL035C	CDC53	Q12018	815 aa	Known RBP	4.86	□□□□□ -1.63
CKA1	YIL035C	QRI1	P43123	477 aa	Known RBP	4.85	□□□□□ -1.63
CKA1	YIL035C	TIM44	Q01852	431 aa		4.85	□□□□□ -1.63
CKA1	YIL035C	NRG1	Q03125	231 aa		4.85	□□□□□ -1.63
CKA1	YIL035C	YDR514C	Q04408	483 aa		4.85	□□□□□ -1.63
CKA1	YIL035C	RSC3	Q06639	885 aa		4.85	□□□□□ -1.63
CKA1	YIL035C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
CKA1	YIL035C	NGG1	P32494	702 aa		4.84	□□□□□ -1.63
CKA1	YIL035C	MTH1	P35198	433 aa		4.84	□□□□□ -1.63
CKA1	YIL035C	SIC1	P38634	284 aa		4.84	□□□□□ -1.63
CKA1	YIL035C	YJL163C	P46996	555 aa		4.84	□□□□□ -1.63
CKA1	YIL035C	GND2	P53319	492 aa		4.84	□□□□□ -1.63
CKA1	YIL035C	IRC10	Q08118	586 aa		4.84	□□□□□ -1.63
CKA1	YIL035C	PER1	P25625	357 aa		4.83	□□□□□ -1.64
CKA1	YIL035C	RLP7	P40693	322 aa	Known RBP	4.83	□□□□□ -1.64
CKA1	YIL035C	TGL5	Q12043	749 aa		4.83	□□□□□ -1.64
CKA1	YIL035C	YHL017W	P38745	532 aa		4.82	□□□□□ -1.64
CKA1	YIL035C	SDS3	P40505	327 aa		4.82	□□□□□ -1.64
CKA1	YIL035C	STU2	P46675	888 aa		4.82	□□□□□ -1.64
CKA1	YIL035C	DAS1	P47005	663 aa		4.82	□□□□□ -1.64
CKA1	YIL035C	NNF1	P47149	201 aa		4.82	□□□□□ -1.64
CKA1	YIL035C	AMA1	P50082	593 aa		4.82	□□□□□ -1.64
CKA1	YIL035C	ZIP2	P53061	704 aa		4.82	□□□□□ -1.64
CKA1	YIL035C	ERR1	P0CX10	437 aa		4.81	□□□□□ -1.64
CKA1	YIL035C	ERR2	P0CX11	437 aa		4.81	□□□□□ -1.64
CKA1	YIL035C	SPC42	P36094	363 aa		4.81	□□□□□ -1.64
CKA1	YIL035C	YIR042C	P40586	236 aa		4.81	□□□□□ -1.64
CKA1	YIL035C	SHR5	P41912	237 aa		4.81	□□□□□ -1.64
CKA1	YIL035C	MAL11	P53048	616 aa		4.81	□□□□□ -1.64
CKA1	YIL035C	YDR338C	Q05497	695 aa		4.81	□□□□□ -1.64
CKA1	YIL035C	CRR1	Q05790	422 aa		4.81	□□□□□ -1.64
CKA1	YIL035C	HBT1	Q07653	1046 aa	Known RBP	4.81	□□□□□ -1.64
CKA1	YIL035C	IRC13	Q08630	104 aa		4.81	□□□□□ -1.64
CKA1	YIL035C	DIF1	O13577	133 aa		4.8	□□□□□ -1.64
CKA1	YIL035C	LAT1	P12695	482 aa	Known RBP	4.8	□□□□□ -1.64
CKA1	YIL035C	GDH3	P39708	457 aa		4.8	□□□□□ -1.64
CKA1	YIL035C	HOS4	P40480	1083 aa		4.8	□□□□□ -1.64
CKA1	YIL035C	MTR3	P48240	250 aa	Predicted RBP	4.8	□□□□□ -1.64
CKA1	YIL035C	ZDS1	P50111	915 aa	Known RBP	4.8	□□□□□ -1.64
CKA1	YIL035C	YOL098C	Q12496	1037 aa		4.8	□□□□□ -1.64
CKA1	YIL035C	ALY2	P47029	1046 aa		4.79	□□□□□ -1.64
CKA1	YIL035C	BCD1	P38772	366 aa		4.78	□□□□□ -1.64
CKA1	YIL035C	MRH1	Q12117	320 aa	Predicted RBP	4.78	□□□□□ -1.64
CKA1	YIL035C	TIM23	P32897	222 aa		4.77	□□□□□ -1.65
CKA1	YIL035C	MTC2	P34246	357 aa		4.77	□□□□□ -1.65
CKA1	YIL035C	YBR259W	P38338	688 aa		4.77	□□□□□ -1.65
CKA1	YIL035C	PCL5	P38794	229 aa		4.77	□□□□□ -1.65
CKA1	YIL035C	CHZ1	P40019	153 aa	Predicted RBP	4.77	□□□□□ -1.65
CKA1	YIL035C	HSV2	P50079	448 aa	Predicted RBP	4.77	□□□□□ -1.65
CKA1	YIL035C	TEX1	P53851	422 aa	Known RBP	4.77	□□□□□ -1.65
CKA1	YIL035C	RIA1	P53893	1110 aa		4.77	□□□□□ -1.65
CKA1	YIL035C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
CKA1	YIL035C	HIS7	P33734	552 aa	Known RBP	4.76	□□□□□ -1.65
CKA1	YIL035C	BAP3	P41815	604 aa		4.76	□□□□□ -1.65
CKA1	YIL035C	YOR131C	Q12486	218 aa		4.76	□□□□□ -1.65
CKA1	YIL035C	ATG11	Q12527	1178 aa		4.76	□□□□□ -1.65
CKA1	YIL035C	SRP40	P32583	406 aa	Predicted RBP	4.75	□□□□□ -1.65
CKA1	YIL035C	MCD4	P36051	919 aa		4.75	□□□□□ -1.65
CKA1	YIL035C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
CKA1	YIL035C	OCA5	P38738	679 aa		4.75	□□□□□ -1.65
CKA1	YIL035C	FMP52	P40008	231 aa		4.75	□□□□□ -1.65
CKA1	YIL035C	UBC11	P52492	156 aa		4.75	□□□□□ -1.65
CKA1	YIL035C	RPN4	Q03465	531 aa		4.75	□□□□□ -1.65
CKA1	YIL035C	SGO1	Q08490	590 aa		4.75	□□□□□ -1.65
CKA1	YIL035C	SUT2	Q12286	268 aa		4.75	□□□□□ -1.65
CKA1	YIL035C	YLR149C	Q99296	730 aa		4.75	□□□□□ -1.65
CKA1	YIL035C	ECM1	P39715	212 aa		4.74	□□□□□ -1.65
CKA1	YIL035C	BUD6	P41697	788 aa		4.74	□□□□□ -1.65
CKA1	YIL035C	GAD1	Q04792	585 aa		4.74	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms