RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene SPC25, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC25	YER018C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	11.67	□□□□□ -0.54	not detected
SPC25	YER018C	RPL4B	P49626	362 aa	Known RBP	11.67	□□□□□ -0.54
SPC25	YER018C	CTR9	P89105	1077 aa		11.67	□□□□□ -0.54
SPC25	YER018C	YML082W	Q04533	649 aa	Known RBP	11.67	□□□□□ -0.54
SPC25	YER018C	IWR1	Q07532	353 aa	Predicted RBP	11.67	□□□□□ -0.54
SPC25	YER018C	NEW1	Q08972	1196 aa	Known RBP	11.67	□□□□□ -0.54
SPC25	YER018C	NAT1	P12945	854 aa	Known RBP	11.66	□□□□□ -0.54
SPC25	YER018C	ADE2	P21264	571 aa	Known RBP	11.66	□□□□□ -0.54
SPC25	YER018C	KIP1	P28742	1111 aa		11.66	□□□□□ -0.54
SPC25	YER018C	ALF1	P53904	254 aa		11.66	□□□□□ -0.54
SPC25	YER018C	RPA49	Q01080	415 aa	Predicted RBP	11.66	□□□□□ -0.54
SPC25	YER018C	CWC21	Q03375	135 aa	Known RBP	11.66	□□□□□ -0.54
SPC25	YER018C	DOT1	Q04089	582 aa	Known RBP	11.66	□□□□□ -0.54
SPC25	YER018C	COX4	P04037	155 aa		11.65	□□□□□ -0.54
SPC25	YER018C	ASP3-2	P0CX77	362 aa		11.65	□□□□□ -0.54
SPC25	YER018C	ASP3-3	P0CX78	362 aa		11.65	□□□□□ -0.54
SPC25	YER018C	ASP3-4	P0CX79	362 aa		11.65	□□□□□ -0.54
SPC25	YER018C	ASP3-1	P0CZ17	362 aa		11.65	□□□□□ -0.54
SPC25	YER018C	GLN3	P18494	730 aa		11.65	□□□□□ -0.54
SPC25	YER018C	RAD54	P32863	898 aa		11.65	□□□□□ -0.54
SPC25	YER018C	TRM2	P33753	639 aa		11.65	□□□□□ -0.54
SPC25	YER018C	DAS1	P47005	663 aa		11.65	□□□□□ -0.54
SPC25	YER018C	CLA4	P48562	842 aa		11.65	□□□□□ -0.54
SPC25	YER018C	YNL134C	P53912	376 aa	Known RBP	11.65	□□□□□ -0.54
SPC25	YER018C	TSR1	Q07381	788 aa	Known RBP	11.65	□□□□□ -0.54
SPC25	YER018C	PCD1	Q12524	340 aa		11.65	□□□□□ -0.54
SPC25	YER018C	SDH2	P21801	266 aa		11.64	□□□□□ -0.55
SPC25	YER018C	POT1	P27796	417 aa	Known RBP RIP-Chip data	11.64	□□□□□ -0.55	not detected
SPC25	YER018C	CDC11	P32458	415 aa		11.64	□□□□□ -0.55
SPC25	YER018C	STU2	P46675	888 aa		11.64	□□□□□ -0.55
SPC25	YER018C	CPR7	P47103	393 aa		11.64	□□□□□ -0.55
SPC25	YER018C	ESBP6	P53918	673 aa		11.64	□□□□□ -0.55
SPC25	YER018C	YNL115C	P53925	644 aa		11.64	□□□□□ -0.55
SPC25	YER018C	YPL034W	Q03083	165 aa		11.64	□□□□□ -0.55
SPC25	YER018C	STE20	Q03497	939 aa	Known RBP	11.64	□□□□□ -0.55
SPC25	YER018C	SGT2	Q12118	346 aa	Known RBP	11.64	□□□□□ -0.55
SPC25	YER018C	SPT2	P06843	333 aa	Predicted RBP	11.63	□□□□□ -0.55
SPC25	YER018C	PET123	P17558	318 aa		11.63	□□□□□ -0.55
SPC25	YER018C	FUB1	P25659	250 aa		11.63	□□□□□ -0.55
SPC25	YER018C	BUD2	P33314	1104 aa		11.63	□□□□□ -0.55
SPC25	YER018C	CAJ1	P39101	391 aa		11.63	□□□□□ -0.55
SPC25	YER018C	YMR124W	P39523	943 aa	Known RBP	11.63	□□□□□ -0.55
SPC25	YER018C	SEC9	P40357	651 aa		11.63	□□□□□ -0.55
SPC25	YER018C	HXT8	P40886	569 aa		11.63	□□□□□ -0.55
SPC25	YER018C	ULI1	P43604	169 aa		11.63	□□□□□ -0.55
SPC25	YER018C	GCV2	P49095	1034 aa		11.63	□□□□□ -0.55
SPC25	YER018C	APT1	P49435	187 aa	Known RBP	11.63	□□□□□ -0.55
SPC25	YER018C	ALG11	P53954	548 aa	Known RBP	11.63	□□□□□ -0.55
SPC25	YER018C	CDC33	P07260	213 aa	Known RBP	11.62	□□□□□ -0.55
SPC25	YER018C	DAL2	P25335	343 aa		11.62	□□□□□ -0.55
SPC25	YER018C	RRT12	P25381	491 aa		11.62	□□□□□ -0.55
SPC25	YER018C	STO1	P34160	861 aa	Known RBP	11.62	□□□□□ -0.55
SPC25	YER018C	UBX7	P38349	436 aa		11.62	□□□□□ -0.55
SPC25	YER018C	SBE2	P42223	864 aa	Known RBP	11.62	□□□□□ -0.55
SPC25	YER018C	ALT2	P52892	507 aa		11.62	□□□□□ -0.55
SPC25	YER018C	ECM30	Q06673	1274 aa		11.62	□□□□□ -0.55
SPC25	YER018C	ABP140	Q08641	628 aa	Known RBP	11.62	□□□□□ -0.55
SPC25	YER018C	GIS3	Q12418	502 aa		11.62	□□□□□ -0.55
SPC25	YER018C	TRP2	P00899	507 aa	Known RBP	11.61	□□□□□ -0.55
SPC25	YER018C	SEC23	P15303	768 aa	Known RBP	11.61	□□□□□ -0.55
SPC25	YER018C	CDC42	P19073	191 aa		11.61	□□□□□ -0.55
SPC25	YER018C	YAP1801	P38856	637 aa		11.61	□□□□□ -0.55
SPC25	YER018C	ISM1	P48526	1002 aa		11.61	□□□□□ -0.55
SPC25	YER018C	DRN1	P53255	507 aa	Known RBP	11.61	□□□□□ -0.55
SPC25	YER018C	OSH2	Q12451	1283 aa		11.61	□□□□□ -0.55
SPC25	YER018C	RAD57	P25301	460 aa		11.6	□□□□□ -0.55
SPC25	YER018C	RPT1	P33299	467 aa	Known RBP	11.6	□□□□□ -0.55
SPC25	YER018C	CSG2	P35206	410 aa		11.6	□□□□□ -0.55
SPC25	YER018C	TRZ1	P36159	838 aa	Predicted RBP	11.6	□□□□□ -0.55
SPC25	YER018C	YER186C	P40101	306 aa		11.6	□□□□□ -0.55
SPC25	YER018C	FMP30	Q02883	468 aa		11.6	□□□□□ -0.55
SPC25	YER018C	PPM1	Q04081	328 aa		11.6	□□□□□ -0.55
SPC25	YER018C	YLR001C	Q07895	862 aa		11.6	□□□□□ -0.55
SPC25	YER018C	PUS1	Q12211	544 aa	Known RBP	11.6	□□□□□ -0.55
SPC25	YER018C	LDB19	Q12502	818 aa		11.6	□□□□□ -0.55
SPC25	YER018C	SNF1	P06782	633 aa	Known RBP	11.59	□□□□□ -0.55
SPC25	YER018C	COX11	P19516	300 aa	Known RBP	11.59	□□□□□ -0.55
SPC25	YER018C	PTC4	P38089	393 aa		11.59	□□□□□ -0.55
SPC25	YER018C	EXO5	P38289	585 aa		11.59	□□□□□ -0.55
SPC25	YER018C	YHL026C	P38740	315 aa		11.59	□□□□□ -0.55
SPC25	YER018C	CCC2	P38995	1004 aa		11.59	□□□□□ -0.55
SPC25	YER018C	KAP123	P40069	1113 aa	Known RBP	11.59	□□□□□ -0.55
SPC25	YER018C	SOV1	Q04748	898 aa		11.59	□□□□□ -0.55
SPC25	YER018C	YLR455W	Q06188	304 aa		11.59	□□□□□ -0.55
SPC25	YER018C	PIB1	Q06651	286 aa		11.59	□□□□□ -0.55
SPC25	YER018C	CSE2	P33308	149 aa		11.58	□□□□□ -0.56
SPC25	YER018C	YKL050C	P35736	922 aa		11.58	□□□□□ -0.56
SPC25	YER018C	MCX1	P38323	520 aa	Predicted RBP	11.58	□□□□□ -0.56
SPC25	YER018C	YHR054C	P38780	354 aa		11.58	□□□□□ -0.56
SPC25	YER018C	SET5	P38890	526 aa	Known RBP	11.58	□□□□□ -0.56
SPC25	YER018C	EFM4	P40516	257 aa		11.58	□□□□□ -0.56
SPC25	YER018C	VPS70	P47161	811 aa		11.58	□□□□□ -0.56
SPC25	YER018C	MAG2	Q06436	670 aa	Known RBP	11.58	□□□□□ -0.56
SPC25	YER018C	CDD1	Q06549	142 aa		11.58	□□□□□ -0.56
SPC25	YER018C	YOR022C	Q12204	715 aa		11.58	□□□□□ -0.56
SPC25	YER018C	ECM3	Q99252	613 aa		11.58	□□□□□ -0.56
SPC25	YER018C	AI5_BETA	Q9ZZX0	354 aa		11.58	□□□□□ -0.56
SPC25	YER018C	GAL10	P04397	699 aa		11.57	□□□□□ -0.56
SPC25	YER018C	RSA4	P25382	515 aa	Known RBP	11.57	□□□□□ -0.56
SPC25	YER018C	EFB1	P32471	206 aa	Known RBP	11.57	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms