RNA–Protein interactions for RNA: YDR113C

PDS1, Transcript of Securin, yeast

Gene PDS1, Length 1,122 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDS1	YDR113C	HXT16	P47185	567 aa		4.94	□□□□□ -1.62
PDS1	YDR113C	DOS2	P54858	310 aa		4.94	□□□□□ -1.62
PDS1	YDR113C	TOP1	P04786	769 aa		4.93	□□□□□ -1.62
PDS1	YDR113C	CAD1	P24813	409 aa	Known RBP	4.93	□□□□□ -1.62
PDS1	YDR113C	SPC42	P36094	363 aa		4.93	□□□□□ -1.62
PDS1	YDR113C	DUS1	P53759	423 aa	Known RBP	4.93	□□□□□ -1.62
PDS1	YDR113C	PEX19	Q07418	342 aa		4.93	□□□□□ -1.62
PDS1	YDR113C	MET7	Q08645	548 aa		4.93	□□□□□ -1.62
PDS1	YDR113C	YOR022C	Q12204	715 aa		4.93	□□□□□ -1.62
PDS1	YDR113C	TRP4	P07285	380 aa	Predicted RBP	4.92	□□□□□ -1.62
PDS1	YDR113C	CIT2	P08679	460 aa		4.92	□□□□□ -1.62
PDS1	YDR113C	SUL1	P38359	859 aa		4.92	□□□□□ -1.62
PDS1	YDR113C	NUP82	P40368	713 aa		4.92	□□□□□ -1.62
PDS1	YDR113C	YDR514C	Q04408	483 aa		4.92	□□□□□ -1.62
PDS1	YDR113C	CTF13	P35203	478 aa		4.91	□□□□□ -1.62
PDS1	YDR113C	QRI1	P43123	477 aa	Known RBP	4.91	□□□□□ -1.62
PDS1	YDR113C	STU2	P46675	888 aa		4.91	□□□□□ -1.62
PDS1	YDR113C	HSV2	P50079	448 aa	Predicted RBP	4.91	□□□□□ -1.62
PDS1	YDR113C	PUS2	P53167	370 aa		4.91	□□□□□ -1.62
PDS1	YDR113C	ASI2	P53895	289 aa		4.91	□□□□□ -1.62
PDS1	YDR113C	TMN2	Q04562	672 aa		4.91	□□□□□ -1.62
PDS1	YDR113C	FPR4	Q06205	392 aa	Predicted RBP	4.91	□□□□□ -1.62
PDS1	YDR113C	REH1	Q06709	432 aa		4.91	□□□□□ -1.62
PDS1	YDR113C	THI21	Q08975	551 aa		4.91	□□□□□ -1.62
PDS1	YDR113C	TRM13	Q12383	476 aa		4.91	□□□□□ -1.62
PDS1	YDR113C	YBR182C-A	Q8TGU6	64 aa		4.91	□□□□□ -1.62
PDS1	YDR113C	ERG4	P25340	473 aa		4.9	□□□□□ -1.63
PDS1	YDR113C	MRPS35	P53292	345 aa		4.9	□□□□□ -1.63
PDS1	YDR113C	OMS1	Q06668	471 aa		4.9	□□□□□ -1.63
PDS1	YDR113C	MCH5	Q08777	521 aa		4.9	□□□□□ -1.63
PDS1	YDR113C	GPR1	Q12361	961 aa		4.9	□□□□□ -1.63
PDS1	YDR113C	SWM1	Q12379	170 aa		4.9	□□□□□ -1.63
PDS1	YDR113C	PRC1	P00729	532 aa		4.89	□□□□□ -1.63
PDS1	YDR113C	PER1	P25625	357 aa		4.89	□□□□□ -1.63
PDS1	YDR113C	MTC2	P34246	357 aa		4.89	□□□□□ -1.63
PDS1	YDR113C	VHR1	P40522	640 aa		4.89	□□□□□ -1.63
PDS1	YDR113C	SSY5	P47002	699 aa		4.89	□□□□□ -1.63
PDS1	YDR113C	MUS81	Q04149	632 aa	Predicted RBP	4.89	□□□□□ -1.63
PDS1	YDR113C	RSC3	Q06639	885 aa		4.89	□□□□□ -1.63
PDS1	YDR113C	TRM11	Q12463	433 aa		4.89	□□□□□ -1.63
PDS1	YDR113C	MDM12	Q92328	271 aa		4.89	□□□□□ -1.63
PDS1	YDR113C	SET5	P38890	526 aa	Known RBP	4.88	□□□□□ -1.63
PDS1	YDR113C	STB4	P50104	949 aa		4.88	□□□□□ -1.63
PDS1	YDR113C	ACF2	Q12168	779 aa		4.88	□□□□□ -1.63
PDS1	YDR113C	PHO8	P11491	566 aa		4.87	□□□□□ -1.63
PDS1	YDR113C	SAP190	P36123	1033 aa		4.87	□□□□□ -1.63
PDS1	YDR113C	RLP7	P40693	322 aa	Known RBP	4.87	□□□□□ -1.63
PDS1	YDR113C	ASM4	Q05166	528 aa		4.87	□□□□□ -1.63
PDS1	YDR113C	YDR338C	Q05497	695 aa		4.87	□□□□□ -1.63
PDS1	YDR113C	YLR125W	Q12138	136 aa		4.87	□□□□□ -1.63
PDS1	YDR113C	MEF1	P25039	761 aa		4.86	□□□□□ -1.63
PDS1	YDR113C	MSH2	P25847	964 aa		4.86	□□□□□ -1.63
PDS1	YDR113C	RPP1	P38786	293 aa		4.86	□□□□□ -1.63
PDS1	YDR113C	NMD2	P38798	1089 aa	Known RBP	4.86	□□□□□ -1.63
PDS1	YDR113C	SAK1	P38990	1142 aa		4.86	□□□□□ -1.63
PDS1	YDR113C	ATF1	P40353	525 aa		4.86	□□□□□ -1.63
PDS1	YDR113C	PFA3	P42836	336 aa		4.86	□□□□□ -1.63
PDS1	YDR113C	ZIP2	P53061	704 aa		4.86	□□□□□ -1.63
PDS1	YDR113C	TIM44	Q01852	431 aa		4.86	□□□□□ -1.63
PDS1	YDR113C	RNT1	Q02555	471 aa		4.86	□□□□□ -1.63
PDS1	YDR113C	IRC10	Q08118	586 aa		4.86	□□□□□ -1.63
PDS1	YDR113C	DIF1	O13577	133 aa		4.85	□□□□□ -1.63
PDS1	YDR113C	YLR415C	O13578	112 aa		4.85	□□□□□ -1.63
PDS1	YDR113C	CDC9	P04819	755 aa		4.85	□□□□□ -1.63
PDS1	YDR113C	MCD4	P36051	919 aa		4.85	□□□□□ -1.63
PDS1	YDR113C	PZF1	P39933	429 aa		4.85	□□□□□ -1.63
PDS1	YDR113C	FKH2	P41813	862 aa		4.85	□□□□□ -1.63
PDS1	YDR113C	ZDS1	P50111	915 aa	Known RBP	4.85	□□□□□ -1.63
PDS1	YDR113C	ALY2	P47029	1046 aa		4.84	□□□□□ -1.63
PDS1	YDR113C	PPR1	P07272	904 aa	Predicted RBP	4.83	□□□□□ -1.64
PDS1	YDR113C	ALG7	P07286	448 aa		4.83	□□□□□ -1.64
PDS1	YDR113C	THI4	P32318	326 aa		4.83	□□□□□ -1.64
PDS1	YDR113C	SHR5	P41912	237 aa		4.83	□□□□□ -1.64
PDS1	YDR113C	CAF16	P43569	289 aa		4.83	□□□□□ -1.64
PDS1	YDR113C	PKH1	Q03407	766 aa		4.83	□□□□□ -1.64
PDS1	YDR113C	MIH1	P23748	554 aa		4.82	□□□□□ -1.64
PDS1	YDR113C	STO1	P34160	861 aa	Known RBP	4.82	□□□□□ -1.64
PDS1	YDR113C	ELO3	P40319	345 aa		4.82	□□□□□ -1.64
PDS1	YDR113C	MUP1	P50276	574 aa		4.82	□□□□□ -1.64
PDS1	YDR113C	UGO1	Q03327	502 aa		4.82	□□□□□ -1.64
PDS1	YDR113C	YMR206W	Q03695	313 aa		4.82	□□□□□ -1.64
PDS1	YDR113C	VBA3	P25594	458 aa		4.81	□□□□□ -1.64
PDS1	YDR113C	PEX6	P33760	1030 aa		4.81	□□□□□ -1.64
PDS1	YDR113C	MTH1	P35198	433 aa		4.81	□□□□□ -1.64
PDS1	YDR113C	CUE2	P36075	443 aa	Known RBP	4.81	□□□□□ -1.64
PDS1	YDR113C	YBR053C	P38235	358 aa		4.81	□□□□□ -1.64
PDS1	YDR113C	SIC1	P38634	284 aa		4.81	□□□□□ -1.64
PDS1	YDR113C	OSW7	P43611	510 aa		4.81	□□□□□ -1.64
PDS1	YDR113C	ATG36	P46983	293 aa		4.81	□□□□□ -1.64
PDS1	YDR113C	SNP1	Q00916	300 aa	Predicted RBP	4.81	□□□□□ -1.64
PDS1	YDR113C	NRG1	Q03125	231 aa		4.81	□□□□□ -1.64
PDS1	YDR113C	DLT1	Q04216	342 aa		4.81	□□□□□ -1.64
PDS1	YDR113C	CRR1	Q05790	422 aa		4.81	□□□□□ -1.64
PDS1	YDR113C	TGL5	Q12043	749 aa		4.81	□□□□□ -1.64
PDS1	YDR113C	YLR149C	Q99296	730 aa		4.81	□□□□□ -1.64
PDS1	YDR113C	MET3	P08536	511 aa		4.8	□□□□□ -1.64
PDS1	YDR113C	NGG1	P32494	702 aa		4.8	□□□□□ -1.64
PDS1	YDR113C	DSS1	P39112	969 aa		4.8	□□□□□ -1.64
PDS1	YDR113C	BNA2	P47125	453 aa		4.8	□□□□□ -1.64
PDS1	YDR113C	RNH70	P53331	553 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms