RNA–Protein interactions for RNA: YDR008C

YDR008C, Transcript of Dubious open reading frame, yeastyeast

Gene YDR008C, Length 351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR008CYDR008C UBC11P52492 156 aa4.21□□□□□ -1.74
YDR008CYDR008C NRG1Q03125 231 aa4.21□□□□□ -1.74
YDR008CYDR008C NUP1P20676 1076 aa4.2□□□□□ -1.74
YDR008CYDR008C ERT1P38140 529 aa4.2□□□□□ -1.74
YDR008CYDR008C MET10P39692 1035 aa4.2□□□□□ -1.74
YDR008CYDR008C TGL5Q12043 749 aa4.2□□□□□ -1.74
YDR008CYDR008C PGK1P00560 416 aaKnown RBP4.19□□□□□ -1.74
YDR008CYDR008C MUS81Q04149 632 aaPredicted RBP4.19□□□□□ -1.74
YDR008CYDR008C PHR1P05066 565 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74not detected
YDR008CYDR008C RFA1P22336 621 aaKnown RBP4.18□□□□□ -1.74
YDR008CYDR008C SNF7P39929 240 aaKnown RBP4.18□□□□□ -1.74
YDR008CYDR008C CLN2P20438 545 aa4.16□□□□□ -1.74
YDR008CYDR008C PPH3P32345 308 aa4.16□□□□□ -1.74
YDR008CYDR008C GLG1P36143 616 aa4.16□□□□□ -1.74
YDR008CYDR008C POL32P47110 350 aa4.16□□□□□ -1.74
YDR008CYDR008C UBC9P50623 157 aaPredicted RBP4.16□□□□□ -1.74
YDR008CYDR008C YDR306CQ06640 478 aa4.16□□□□□ -1.74
YDR008CYDR008C BDH2P39713 417 aa4.15□□□□□ -1.75
YDR008CYDR008C YPL068CQ02749 293 aa4.15□□□□□ -1.75
YDR008CYDR008C YLR415CO13578 112 aa4.14□□□□□ -1.75
YDR008CYDR008C URA1P28272 314 aaPredicted RBP4.14□□□□□ -1.75
YDR008CYDR008C SEN54Q02825 467 aaPredicted RBP4.14□□□□□ -1.75
YDR008CYDR008C CTR1P49573 406 aa4.13□□□□□ -1.75
YDR008CYDR008C SIR3P06701 978 aa4.12□□□□□ -1.75
YDR008CYDR008C MRK1P50873 501 aa4.12□□□□□ -1.75
YDR008CYDR008C YAP1802P53309 568 aa4.12□□□□□ -1.75
YDR008CYDR008C HAL9Q12180 1030 aa4.12□□□□□ -1.75
YDR008CYDR008C YRO2P38079 344 aa4.11□□□□□ -1.75
YDR008CYDR008C SAK1P38990 1142 aa4.11□□□□□ -1.75
YDR008CYDR008C PZF1P39933 429 aa4.11□□□□□ -1.75
YDR008CYDR008C PFA3P42836 336 aa4.11□□□□□ -1.75
YDR008CYDR008C DUS1P53759 423 aaKnown RBP4.11□□□□□ -1.75
YDR008CYDR008C PET112P33893 541 aa4.1□□□□□ -1.75
YDR008CYDR008C ARG2P40360 574 aa4.1□□□□□ -1.75
YDR008CYDR008C BAP3P41815 604 aa4.1□□□□□ -1.75
YDR008CYDR008C ADE8P04161 214 aa4.09□□□□□ -1.75
YDR008CYDR008C APN1P22936 367 aa4.09□□□□□ -1.75
YDR008CYDR008C NGG1P32494 702 aa4.09□□□□□ -1.75
YDR008CYDR008C SLK19Q08581 821 aaKnown RBP4.09□□□□□ -1.75
YDR008CYDR008C RPS9AO13516 197 aaKnown RBP4.08□□□□□ -1.76
YDR008CYDR008C PYC1P11154 1178 aaKnown RBP4.08□□□□□ -1.76
YDR008CYDR008C REV7P38927 245 aa4.07□□□□□ -1.76
YDR008CYDR008C FAA4P47912 694 aaKnown RBP4.07□□□□□ -1.76
YDR008CYDR008C PAN2P53010 1115 aaPredicted RBP4.07□□□□□ -1.76
YDR008CYDR008C STP1Q00947 519 aa4.07□□□□□ -1.76
YDR008CYDR008C VPS16Q03308 798 aa4.07□□□□□ -1.76
YDR008CYDR008C BUL2Q03758 920 aaKnown RBP4.07□□□□□ -1.76
YDR008CYDR008C YKL033W-AQ86ZR7 236 aa4.07□□□□□ -1.76
YDR008CYDR008C SBA1P28707 216 aaKnown RBP4.06□□□□□ -1.76
YDR008CYDR008C AAR2P32357 355 aaPredicted RBP4.06□□□□□ -1.76
YDR008CYDR008C SPC29P33419 253 aa4.06□□□□□ -1.76
YDR008CYDR008C MUP3P38734 546 aa4.06□□□□□ -1.76
YDR008CYDR008C SFB3P38810 929 aa4.06□□□□□ -1.76
YDR008CYDR008C SSY5P47002 699 aa4.06□□□□□ -1.76
YDR008CYDR008C FMP30Q02883 468 aa4.06□□□□□ -1.76
YDR008CYDR008C RRP15Q06511 250 aaPredicted RBP4.06□□□□□ -1.76
YDR008CYDR008C RMD1Q03441 430 aa4.05□□□□□ -1.76
YDR008CYDR008C MLH3Q12083 715 aa4.05□□□□□ -1.76
YDR008CYDR008C VBA5P36172 582 aa4.04□□□□□ -1.76
YDR008CYDR008C TOK1P40310 691 aa4.04□□□□□ -1.76
YDR008CYDR008C EAF1Q06337 982 aa4.04□□□□□ -1.76
YDR008CYDR008C ATG11Q12527 1178 aa4.04□□□□□ -1.76
YDR008CYDR008C SIC1P38634 284 aa4.03□□□□□ -1.76
YDR008CYDR008C TEX1P53851 422 aaKnown RBP4.03□□□□□ -1.76
YDR008CYDR008C GPR1Q12361 961 aa4.03□□□□□ -1.76
YDR008CYDR008C MBR1P23493 339 aa4.02□□□□□ -1.77
YDR008CYDR008C AGP1P25376 633 aa4.02□□□□□ -1.77
YDR008CYDR008C ATG4P53867 494 aa4.02□□□□□ -1.77
YDR008CYDR008C YOR022CQ12204 715 aa4.02□□□□□ -1.77
YDR008CYDR008C RPA135P22138 1203 aaKnown RBP4.01□□□□□ -1.77
YDR008CYDR008C SIT1P39980 628 aa4.01□□□□□ -1.77
YDR008CYDR008C TAX4P47030 604 aa4.01□□□□□ -1.77
YDR008CYDR008C CCM1P48237 864 aaPredicted RBP4.01□□□□□ -1.77
YDR008CYDR008C RGC1Q06108 1083 aaKnown RBP4.01□□□□□ -1.77
YDR008CYDR008C CYS3P31373 394 aaKnown RBP4□□□□□ -1.77
YDR008CYDR008C CCR4P31384 837 aaKnown RBP4□□□□□ -1.77
YDR008CYDR008C CCT3P39077 534 aaKnown RBP4□□□□□ -1.77
YDR008CYDR008C IRC8P47046 822 aa4□□□□□ -1.77
YDR008CYDR008C FHN1P53279 174 aa4□□□□□ -1.77
YDR008CYDR008C MTL1P53214 551 aa3.99□□□□□ -1.77
YDR008CYDR008C STE12P13574 688 aa3.98□□□□□ -1.77
YDR008CYDR008C PHO11P35842 467 aa3.98□□□□□ -1.77
YDR008CYDR008C PHO12P38693 467 aa3.98□□□□□ -1.77
YDR008CYDR008C FMO1P38866 432 aa3.98□□□□□ -1.77
YDR008CYDR008C YMC1P32331 307 aa3.97□□□□□ -1.77
YDR008CYDR008C MVD1P32377 396 aaKnown RBP3.97□□□□□ -1.77
YDR008CYDR008C ULP2P40537 1034 aaPredicted RBP3.97□□□□□ -1.77
YDR008CYDR008C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
YDR008CYDR008C GDE1Q02979 1223 aa3.97□□□□□ -1.77
YDR008CYDR008C FAL1Q12099 399 aaKnown RBP3.97□□□□□ -1.77
YDR008CYDR008C LYS9P38999 446 aa3.96□□□□□ -1.78
YDR008CYDR008C HFD1Q04458 532 aa3.96□□□□□ -1.78
YDR008CYDR008C REC104P33323 182 aa3.95□□□□□ -1.78
YDR008CYDR008C MNR2P35724 969 aa3.95□□□□□ -1.78
YDR008CYDR008C CCT4P39078 528 aaKnown RBP3.95□□□□□ -1.78
YDR008CYDR008C GAD1Q04792 585 aa3.95□□□□□ -1.78
YDR008CYDR008C FUB1P25659 250 aa3.94□□□□□ -1.78
YDR008CYDR008C MAF1P41910 395 aa3.94□□□□□ -1.78
YDR008CYDR008C LCD1Q04377 747 aa3.94□□□□□ -1.78
YDR008CYDR008C ADE5,7P07244 802 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms