RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeastyeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIF2YBR103W VPS8P39702 1274 aa5.37□□□□□ -1.55
SIF2YBR103W YTA6P40328 754 aa5.37□□□□□ -1.55
SIF2YBR103W SEC26P41810 973 aaKnown RBP5.37□□□□□ -1.55
SIF2YBR103W BTN2P53286 410 aa5.37□□□□□ -1.55
SIF2YBR103W IST1P53843 298 aaPredicted RBP5.37□□□□□ -1.55
SIF2YBR103W GCR2Q01722 534 aa5.37□□□□□ -1.55
SIF2YBR103W YML037CQ03703 340 aa5.37□□□□□ -1.55
SIF2YBR103W VMS1Q04311 632 aaKnown RBP5.37□□□□□ -1.55
SIF2YBR103W SPN1Q06505 410 aaPredicted RBP5.37□□□□□ -1.55
SIF2YBR103W TSR1Q07381 788 aaKnown RBP5.37□□□□□ -1.55
SIF2YBR103W ERR1P0CX10 437 aa5.36□□□□□ -1.55
SIF2YBR103W ERR2P0CX11 437 aa5.36□□□□□ -1.55
SIF2YBR103W HSP60P19882 572 aaKnown RBP5.36□□□□□ -1.55
SIF2YBR103W RPL5P26321 297 aaKnown RBP5.36□□□□□ -1.55
SIF2YBR103W PRO3P32263 286 aaKnown RBP5.36□□□□□ -1.55
SIF2YBR103W SQT1P35184 431 aa5.36□□□□□ -1.55
SIF2YBR103W RPC37P36121 282 aa5.36□□□□□ -1.55
SIF2YBR103W YBR184WP38299 523 aa5.36□□□□□ -1.55
SIF2YBR103W GPB2P39717 880 aa5.36□□□□□ -1.55
SIF2YBR103W SIT1P39980 628 aa5.36□□□□□ -1.55
SIF2YBR103W PIC2P40035 300 aa5.36□□□□□ -1.55
SIF2YBR103W CCM1P48237 864 aaPredicted RBP5.36□□□□□ -1.55
SIF2YBR103W YNL247WP53852 767 aaKnown RBP5.36□□□□□ -1.55
SIF2YBR103W ARO80Q04052 950 aa5.36□□□□□ -1.55
SIF2YBR103W YPL225WQ08971 146 aaKnown RBP5.36□□□□□ -1.55
SIF2YBR103W CLF1Q12309 687 aaPredicted RBP5.36□□□□□ -1.55
SIF2YBR103W SFP1P32432 683 aa5.35□□□□□ -1.55
SIF2YBR103W YME2P32843 850 aa5.35□□□□□ -1.55
SIF2YBR103W RER2P35196 286 aa5.35□□□□□ -1.55
SIF2YBR103W GIP1P38229 639 aa5.35□□□□□ -1.55
SIF2YBR103W BEM4P39011 633 aa5.35□□□□□ -1.55
SIF2YBR103W RVS167P39743 482 aaKnown RBP5.35□□□□□ -1.55
SIF2YBR103W YRB1P41920 201 aaKnown RBP5.35□□□□□ -1.55
SIF2YBR103W RSM26P47141 266 aa5.35□□□□□ -1.55
SIF2YBR103W PRP31P49704 494 aaPredicted RBP5.35□□□□□ -1.55
SIF2YBR103W FOL1P53848 824 aa5.35□□□□□ -1.55
SIF2YBR103W YNL165WP53891 406 aa5.35□□□□□ -1.55
SIF2YBR103W MYO5Q04439 1219 aaKnown RBP5.35□□□□□ -1.55
SIF2YBR103W SMC6Q12749 1114 aa5.35□□□□□ -1.55
SIF2YBR103W YKL068W-AQ3E826 78 aa5.35□□□□□ -1.55
SIF2YBR103W TY4A-HQ6Q5P6 413 aa5.35□□□□□ -1.55
SIF2YBR103W MYO1P08964 1928 aa5.35□□□□□ -1.55
SIF2YBR103W TAF13P11747 167 aa5.34□□□□□ -1.55
SIF2YBR103W SDH2P21801 266 aa5.34□□□□□ -1.55
SIF2YBR103W MAK31P23059 88 aa5.34□□□□□ -1.55
SIF2YBR103W RIT1P23796 513 aa5.34□□□□□ -1.55
SIF2YBR103W EUG1P32474 517 aa5.34□□□□□ -1.55
SIF2YBR103W KAP122P32767 1081 aa5.34□□□□□ -1.55
SIF2YBR103W AIM46P38885 310 aa5.34□□□□□ -1.55
SIF2YBR103W BDH2P39713 417 aa5.34□□□□□ -1.55
SIF2YBR103W MXR1P40029 184 aa5.34□□□□□ -1.55
SIF2YBR103W SEC27P41811 889 aaKnown RBP5.34□□□□□ -1.55
SIF2YBR103W NUT1P53114 1132 aa5.34□□□□□ -1.55
SIF2YBR103W ERP6P53198 216 aa5.34□□□□□ -1.55
SIF2YBR103W KRE33P53914 1056 aaKnown RBP5.34□□□□□ -1.55
SIF2YBR103W RPT6Q01939 405 aaKnown RBP5.34□□□□□ -1.55
SIF2YBR103W EEB1Q02891 456 aa5.34□□□□□ -1.55
SIF2YBR103W SPO20Q04359 397 aa5.34□□□□□ -1.55
SIF2YBR103W CIT1P00890 479 aa5.34□□□□□ -1.56
SIF2YBR103W CAN1P04817 590 aa5.34□□□□□ -1.56
SIF2YBR103W NUC1P08466 329 aa5.34□□□□□ -1.56
SIF2YBR103W RAD18P10862 487 aa5.34□□□□□ -1.56
SIF2YBR103W VMA2P16140 517 aaKnown RBP5.34□□□□□ -1.56
SIF2YBR103W SAM2P19358 384 aaKnown RBP5.34□□□□□ -1.56
SIF2YBR103W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.34□□□□□ -1.56not detected
SIF2YBR103W PEP3P27801 918 aa5.34□□□□□ -1.56
SIF2YBR103W RPL8BP29453 256 aaKnown RBP5.34□□□□□ -1.56
SIF2YBR103W RAD16P31244 790 aa5.34□□□□□ -1.56
SIF2YBR103W MRP8P35719 219 aa5.34□□□□□ -1.56
SIF2YBR103W MRPL10P36520 322 aa5.34□□□□□ -1.56
SIF2YBR103W PHO88P38264 188 aaPredicted RBP5.34□□□□□ -1.56
SIF2YBR103W PMC1P38929 1173 aaPredicted RBP5.34□□□□□ -1.56
SIF2YBR103W PTK2P47116 818 aaKnown RBP5.34□□□□□ -1.56
SIF2YBR103W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.34□□□□□ -1.56not detected
SIF2YBR103W INP52P50942 1183 aa5.34□□□□□ -1.56
SIF2YBR103W HXT17P53631 564 aa5.34□□□□□ -1.56
SIF2YBR103W HST1P53685 503 aa5.34□□□□□ -1.56
SIF2YBR103W HDA1P53973 706 aa5.34□□□□□ -1.56
SIF2YBR103W ADE12P80210 433 aaKnown RBP5.34□□□□□ -1.56
SIF2YBR103W INP2Q03824 705 aa5.34□□□□□ -1.56
SIF2YBR103W LCB5Q06147 687 aaKnown RBP5.34□□□□□ -1.56
SIF2YBR103W YOR296WQ08748 1289 aa5.34□□□□□ -1.56
SIF2YBR103W ICL2Q12031 575 aa5.34□□□□□ -1.56
SIF2YBR103W ECM29P38737 1868 aa5.33□□□□□ -1.56
SIF2YBR103W AGP1P25376 633 aa5.33□□□□□ -1.56
SIF2YBR103W ARE1P25628 610 aa5.33□□□□□ -1.56
SIF2YBR103W DLD1P32891 587 aa5.33□□□□□ -1.56
SIF2YBR103W STE5P32917 917 aa5.33□□□□□ -1.56
SIF2YBR103W MPE1P35728 441 aaKnown RBP5.33□□□□□ -1.56
SIF2YBR103W YKR018CP36114 725 aa5.33□□□□□ -1.56
SIF2YBR103W HXT13P39924 564 aa5.33□□□□□ -1.56
SIF2YBR103W PSF2P40359 213 aa5.33□□□□□ -1.56
SIF2YBR103W SPO22P40511 975 aa5.33□□□□□ -1.56
SIF2YBR103W HUL4P40985 892 aa5.33□□□□□ -1.56
SIF2YBR103W MSH6Q03834 1242 aa5.33□□□□□ -1.56
SIF2YBR103W YDR341CQ05506 607 aaKnown RBP5.33□□□□□ -1.56
SIF2YBR103W TFC6Q06339 672 aa5.33□□□□□ -1.56
SIF2YBR103W CDC19P00549 500 aaKnown RBP5.32□□□□□ -1.56
SIF2YBR103W ACE2P21192 770 aa5.32□□□□□ -1.56
SIF2YBR103W TGL1P34163 548 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms