RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 MIER1Q8N108 512 aa5.22□□□□□ -1.57
CCDC7-213ENST00000639290 ZNF622Q969S3 477 aaKnown RBP eCLIP5.22□□□□□ -1.57
CCDC7-213ENST00000639290 IRF2BPLQ9H1B7 796 aa5.22□□□□□ -1.57
CCDC7-213ENST00000639290 ZBTB47Q9UFB7 747 aaPredicted RBP5.22□□□□□ -1.57
CCDC7-213ENST00000639290 KIAA0100Q14667 2235 aaKnown RBP5.21□□□□□ -1.57
CCDC7-213ENST00000639290 TTC21BQ7Z4L5 1316 aa5.21□□□□□ -1.57
CCDC7-213ENST00000639290 SZT2Q5T011 3432 aa5.21□□□□□ -1.57
CCDC7-213ENST00000639290 RTL1A6NKG5 1358 aa5.21□□□□□ -1.58
CCDC7-213ENST00000639290 IP6K1Q92551 441 aa5.21□□□□□ -1.58
CCDC7-213ENST00000639290 UBE2OQ9C0C9 1292 aaKnown RBP5.21□□□□□ -1.58
CCDC7-213ENST00000639290 KMT2BQ9UMN6 2715 aaPredicted RBP5.21□□□□□ -1.58
CCDC7-213ENST00000639290 PI4K2BG5E9Z4 385 aa5.21□□□□□ -1.58
CCDC7-213ENST00000639290 ZPR1O75312 459 aa5.21□□□□□ -1.58
CCDC7-213ENST00000639290 ANKLE1Q8NAG6 615 aa5.21□□□□□ -1.58
CCDC7-213ENST00000639290 PHF12Q96QT6 1004 aa5.21□□□□□ -1.58
CCDC7-213ENST00000639290 A0A0C4DFX4 3053 aa5.2□□□□□ -1.58
CCDC7-213ENST00000639290 MANSC4A6NHS7 340 aaPredicted RBP5.2□□□□□ -1.58
CCDC7-213ENST00000639290 UNCXA6NJT0 531 aa5.2□□□□□ -1.58
CCDC7-213ENST00000639290 GALR2O43603 387 aaPredicted RBP5.2□□□□□ -1.58
CCDC7-213ENST00000639290 NFIXQ14938 502 aa5.2□□□□□ -1.58
CCDC7-213ENST00000639290 CFAP70Q5T0N1 1121 aa5.2□□□□□ -1.58
CCDC7-213ENST00000639290 TSPYL2Q9H2G4 693 aaPredicted RBP5.2□□□□□ -1.58
CCDC7-213ENST00000639290 NARFQ9UHQ1 456 aa5.2□□□□□ -1.58
CCDC7-213ENST00000639290 GTF3C3Q9Y5Q9 886 aa5.2□□□□□ -1.58
CCDC7-213ENST00000639290 CACNA1SQ13698 1873 aa5.2□□□□□ -1.58
CCDC7-213ENST00000639290 COL3A1P02461 1466 aaPredicted RBP5.2□□□□□ -1.58
CCDC7-213ENST00000639290 MYH14Q7Z406 1995 aaKnown RBP5.2□□□□□ -1.58
CCDC7-213ENST00000639290 PLCD3Q8N3E9 789 aa5.2□□□□□ -1.58
CCDC7-213ENST00000639290 TMOD3Q9NYL9 352 aa5.2□□□□□ -1.58
CCDC7-213ENST00000639290 CXXC1Q9P0U4 656 aaPredicted RBP5.2□□□□□ -1.58
CCDC7-213ENST00000639290 FBXO3Q9UK99 471 aa5.2□□□□□ -1.58
CCDC7-213ENST00000639290 GJA3Q9Y6H8 435 aa5.2□□□□□ -1.58
CCDC7-213ENST00000639290 SRGNP10124 158 aa5.19□□□□□ -1.58
CCDC7-213ENST00000639290 TATP17735 454 aaPredicted RBP5.19□□□□□ -1.58
CCDC7-213ENST00000639290 MAGEA10P43363 369 aaPredicted RBP5.19□□□□□ -1.58
CCDC7-213ENST00000639290 OTUD7BQ6GQQ9 843 aa5.19□□□□□ -1.58
CCDC7-213ENST00000639290 USP48Q86UV5 1035 aa5.19□□□□□ -1.58
CCDC7-213ENST00000639290 HOMEZQ8IX15 550 aa5.19□□□□□ -1.58
CCDC7-213ENST00000639290 ZNF277Q9NRM2 450 aaPredicted RBP5.19□□□□□ -1.58
CCDC7-213ENST00000639290 ALPK3Q96L96 1907 aa5.19□□□□□ -1.58
CCDC7-213ENST00000639290 CEP290O15078 2479 aa5.19□□□□□ -1.58
CCDC7-213ENST00000639290 COL4A5P29400 1685 aa5.19□□□□□ -1.58
CCDC7-213ENST00000639290 PTPN5P54829 565 aa5.19□□□□□ -1.58
CCDC7-213ENST00000639290 SP3Q02447 781 aa5.19□□□□□ -1.58
CCDC7-213ENST00000639290 MYLIPQ8WY64 445 aa5.19□□□□□ -1.58
CCDC7-213ENST00000639290 RAPGEF4Q8WZA2 1011 aa5.19□□□□□ -1.58
CCDC7-213ENST00000639290 C11orf16Q9NQ32 467 aa5.19□□□□□ -1.58
CCDC7-213ENST00000639290 CARMIL3Q8ND23 1372 aa5.18□□□□□ -1.58
CCDC7-213ENST00000639290 EPHX3Q9H6B9 360 aa5.18□□□□□ -1.58
CCDC7-213ENST00000639290 PTCH2Q9Y6C5 1203 aa5.18□□□□□ -1.58
CCDC7-213ENST00000639290 MUC6Q6W4X9 2439 aa5.18□□□□□ -1.58
CCDC7-213ENST00000639290 NPR1P16066 1061 aa5.18□□□□□ -1.58
CCDC7-213ENST00000639290 KRT26Q7Z3Y9 468 aa5.18□□□□□ -1.58
CCDC7-213ENST00000639290 CD99L2Q8TCZ2 262 aa5.18□□□□□ -1.58
CCDC7-213ENST00000639290 DCPSQ96C86 337 aaKnown RBP5.18□□□□□ -1.58
CCDC7-213ENST00000639290 FBXL18Q96ME1 805 aa5.18□□□□□ -1.58
CCDC7-213ENST00000639290 ATG3Q9NT62 314 aa5.18□□□□□ -1.58
CCDC7-213ENST00000639290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.18□□□□□ -1.58
CCDC7-213ENST00000639290 KLRG2A4D1S0 409 aaPredicted RBP5.17□□□□□ -1.58
CCDC7-213ENST00000639290 TNIP1Q15025 636 aa5.17□□□□□ -1.58
CCDC7-213ENST00000639290 DPF2Q92785 391 aa5.17□□□□□ -1.58
CCDC7-213ENST00000639290 SRP68Q9UHB9 627 aaKnown RBP5.17□□□□□ -1.58
CCDC7-213ENST00000639290 TRAK1Q9UPV9 953 aa5.17□□□□□ -1.58
CCDC7-213ENST00000639290 NPC1L1Q9UHC9 1359 aa5.17□□□□□ -1.58
CCDC7-213ENST00000639290 NCAPD2Q15021 1401 aa5.17□□□□□ -1.58
CCDC7-213ENST00000639290 H7C1D1 291 aa5.17□□□□□ -1.58
CCDC7-213ENST00000639290 BMP1P13497 986 aa5.17□□□□□ -1.58
CCDC7-213ENST00000639290 PKN1Q16512 942 aa5.17□□□□□ -1.58
CCDC7-213ENST00000639290 IFNL1Q8IU54 200 aa5.17□□□□□ -1.58
CCDC7-213ENST00000639290 NIM1KQ8IY84 436 aa5.17□□□□□ -1.58
CCDC7-213ENST00000639290 SOS1Q07889 1333 aaPredicted RBP5.17□□□□□ -1.58
CCDC7-213ENST00000639290 UBXN2AP68543 259 aa5.16□□□□□ -1.58
CCDC7-213ENST00000639290 ZBTB48P10074 688 aaPredicted RBP5.16□□□□□ -1.58
CCDC7-213ENST00000639290 ALDH1B1P30837 517 aa5.16□□□□□ -1.58
CCDC7-213ENST00000639290 ST5P78524 1137 aa5.16□□□□□ -1.58
CCDC7-213ENST00000639290 TCIRG1Q13488 830 aa5.16□□□□□ -1.58
CCDC7-213ENST00000639290 RGL3Q3MIN7 710 aa5.16□□□□□ -1.58
CCDC7-213ENST00000639290 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.16□□□□□ -1.58
CCDC7-213ENST00000639290 A0A087WZG4 1122 aa5.15□□□□□ -1.58
CCDC7-213ENST00000639290 ID4P47928 161 aa5.15□□□□□ -1.58
CCDC7-213ENST00000639290 HIRAP54198 1017 aaPredicted RBP5.15□□□□□ -1.58
CCDC7-213ENST00000639290 ATRNL1Q5VV63 1379 aa5.15□□□□□ -1.58
CCDC7-213ENST00000639290 USPL1Q5W0Q7 1092 aa5.15□□□□□ -1.58
CCDC7-213ENST00000639290 NECAB2Q7Z6G3 386 aa5.15□□□□□ -1.58
CCDC7-213ENST00000639290 MS4A3Q96HJ5 214 aa5.15□□□□□ -1.58
CCDC7-213ENST00000639290 UNC80Q8N2C7 3258 aa5.15□□□□□ -1.59
CCDC7-213ENST00000639290 SOBPA7XYQ1 873 aa5.15□□□□□ -1.59
CCDC7-213ENST00000639290 SGPL1O95470 568 aa5.15□□□□□ -1.59
CCDC7-213ENST00000639290 RPS12P25398 132 aaKnown RBP5.15□□□□□ -1.59
CCDC7-213ENST00000639290 CRKLP46109 303 aaKnown RBP5.15□□□□□ -1.59
CCDC7-213ENST00000639290 GMPSP49915 693 aaPredicted RBP5.15□□□□□ -1.59
CCDC7-213ENST00000639290 CDCA5Q96FF9 252 aa5.15□□□□□ -1.59
CCDC7-213ENST00000639290 ASAP1Q9ULH1 1129 aa5.15□□□□□ -1.59
CCDC7-213ENST00000639290 CACNA1BQ00975 2339 aa5.14□□□□□ -1.59
CCDC7-213ENST00000639290 A0A1W2PP64 1363 aa5.14□□□□□ -1.59
CCDC7-213ENST00000639290 COL15A1P39059 1388 aa5.14□□□□□ -1.59
CCDC7-213ENST00000639290 ERVV-2B6SEH9 535 aa5.14□□□□□ -1.59
CCDC7-213ENST00000639290 PROB1E7EW31 1015 aa5.14□□□□□ -1.59
CCDC7-213ENST00000639290 CYP27B1O15528 508 aa5.14□□□□□ -1.59
CCDC7-213ENST00000639290 GFRA3O60609 400 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms