RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-223ENST00000637293 ADAM32Q8TC27 787 aa3.27□□□□□ -1.89
GABRB3-223ENST00000637293 THAP3Q8WTV1 239 aaPredicted RBP3.27□□□□□ -1.89
GABRB3-223ENST00000637293 SNRNP27Q8WVK2 155 aaKnown RBP3.27□□□□□ -1.89
GABRB3-223ENST00000637293 HNRNPLLQ8WVV9 542 aaKnown RBP3.27□□□□□ -1.89
GABRB3-223ENST00000637293 SCG3Q8WXD2 468 aaKnown RBP3.27□□□□□ -1.89
GABRB3-223ENST00000637293 TRIM52Q96A61 297 aa3.27□□□□□ -1.89
GABRB3-223ENST00000637293 SLC39A13Q96H72 371 aa3.27□□□□□ -1.89
GABRB3-223ENST00000637293 PURBQ96QR8 312 aaKnown RBP3.27□□□□□ -1.89
GABRB3-223ENST00000637293 ARHGAP9Q9BRR9 750 aa3.27□□□□□ -1.89
GABRB3-223ENST00000637293 NBPF3Q9H094 633 aa3.27□□□□□ -1.89
GABRB3-223ENST00000637293 RBSNQ9H1K0 784 aa3.27□□□□□ -1.89
GABRB3-223ENST00000637293 CAAP1Q9H8G2 361 aa3.27□□□□□ -1.89
GABRB3-223ENST00000637293 ARHGEF10LQ9HCE6 1279 aa3.27□□□□□ -1.89
GABRB3-223ENST00000637293 NRBP1Q9UHY1 535 aa3.27□□□□□ -1.89
GABRB3-223ENST00000637293 MSRB2Q9Y3D2 182 aa3.27□□□□□ -1.89
GABRB3-223ENST00000637293 MRVI1Q9Y6F6 885 aa3.27□□□□□ -1.89
GABRB3-223ENST00000637293 ATAD2Q6PL18 1390 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 KDM4FA0A1W2PPD8 638 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 EIF1AYO14602 144 aaKnown RBP3.26□□□□□ -1.89
GABRB3-223ENST00000637293 CPNE3O75131 537 aaKnown RBP3.26□□□□□ -1.89
GABRB3-223ENST00000637293 IFIT2P09913 472 aaKnown RBP3.26□□□□□ -1.89
GABRB3-223ENST00000637293 U2AF1L5P0DN76 240 aaPredicted RBP3.26□□□□□ -1.89
GABRB3-223ENST00000637293 RLBP1P12271 317 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 CDKN1CP49918 316 aaPredicted RBP3.26□□□□□ -1.89
GABRB3-223ENST00000637293 FXR2P51116 673 aaKnown RBP eCLIP3.26□□□□□ -1.89
GABRB3-223ENST00000637293 NFKB2Q00653 900 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 U2AF1Q01081 240 aaKnown RBP eCLIP3.26□□□□□ -1.89
GABRB3-223ENST00000637293 KCTD2Q14681 263 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 KMT5BQ4FZB7 885 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 ALFQ53S48 1182 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 KSR2Q6VAB6 950 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 RELL1Q8IUW5 271 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 CCDC89Q8N998 374 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 MYRIPQ8NFW9 859 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 ANAPC16Q96DE5 110 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 MFSD3Q96ES6 412 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 CDC5LQ99459 802 aaKnown RBP3.26□□□□□ -1.89
GABRB3-223ENST00000637293 RSRP1Q9BUV0 290 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 NOC4LQ9BVI4 516 aaKnown RBP3.26□□□□□ -1.89
GABRB3-223ENST00000637293 CFHR5Q9BXR6 569 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 ESF1Q9H501 851 aaKnown RBP3.26□□□□□ -1.89
GABRB3-223ENST00000637293 MAP10Q9P2G4 905 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 INTUQ9ULD6 942 aa3.26□□□□□ -1.89
GABRB3-223ENST00000637293 PSDA5PKW4 1024 aaPredicted RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 KCNQ2O43526 872 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 SCGB1D2O95969 90 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 LDHCP07864 332 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 HSP90AB1P08238 724 aaKnown RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 CFHP08603 1231 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 NBPF7P0C2Y1 421 aaPredicted RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 PTPREP23469 700 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 STAT3P40763 770 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 PPM1FP49593 454 aaPredicted RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 PURAQ00577 322 aaKnown RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 DNM1Q05193 864 aaKnown RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 SQSTM1Q13501 440 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 GFOD2Q3B7J2 385 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 MTERF2Q49AM1 385 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 INO80DQ53TQ3 878 aaPredicted RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 DALRD3Q5D0E6 543 aaKnown RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 C10orf62Q5T681 223 aaPredicted RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 ACBD5Q5T8D3 534 aaPredicted RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 C3orf67Q6ZVT6 689 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 DDX42Q86XP3 938 aaKnown RBP eCLIP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 JAMLQ86YT9 394 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 SEPT12Q8IYM1 358 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 CPXCR1Q8N123 301 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 STAG2Q8N3U4 1231 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 ENAHQ8N8S7 591 aaPredicted RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 CHMP7Q8WUX9 453 aaPredicted RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 E2F7Q96AV8 911 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 CAMKK2Q96RR4 588 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 USB1Q9BQ65 265 aaKnown RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 RSPH9Q9H1X1 276 aaPredicted RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 KANSL2Q9H9L4 492 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 PPCSQ9HAB8 311 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 ENAMQ9NRM1 1142 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 GINM1Q9NU53 330 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 KBTBD4Q9NVX7 518 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 FBXO2Q9UK22 296 aaPredicted RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 POLIQ9UNA4 740 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 GTF2A1LQ9UNN4 478 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 FRMD4BQ9Y2L6 1034 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 MRPS23Q9Y3D9 190 aaKnown RBP3.25□□□□□ -1.89
GABRB3-223ENST00000637293 CHMP3Q9Y3E7 222 aa3.25□□□□□ -1.89
GABRB3-223ENST00000637293 WASHC2CQ9Y4E1 1318 aa3.24□□□□□ -1.89
GABRB3-223ENST00000637293 SHTN1A0MZ66 631 aa3.24□□□□□ -1.89
GABRB3-223ENST00000637293 BICDL2A1A5D9 508 aa3.24□□□□□ -1.89
GABRB3-223ENST00000637293 A6NJY4 79 aa3.24□□□□□ -1.89
GABRB3-223ENST00000637293 ASMTLO95671 621 aa3.24□□□□□ -1.89
GABRB3-223ENST00000637293 MYCLP1P12525 358 aaPredicted RBP3.24□□□□□ -1.89
GABRB3-223ENST00000637293 COL9A1P20849 921 aa3.24□□□□□ -1.89
GABRB3-223ENST00000637293 VARSP26640 1264 aaKnown RBP3.24□□□□□ -1.89
GABRB3-223ENST00000637293 EIF4A3P38919 411 aaKnown RBP3.24□□□□□ -1.89
GABRB3-223ENST00000637293 GUCY2FP51841 1108 aa3.24□□□□□ -1.89
GABRB3-223ENST00000637293 NEK2P51955 445 aa3.24□□□□□ -1.89
GABRB3-223ENST00000637293 MCL1Q07820 350 aa3.24□□□□□ -1.89
GABRB3-223ENST00000637293 PICALMQ13492 652 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms