RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 TMC2Q8TDI7 906 aa9.4□□□□□ -0.9
CLN5-217ENST00000637278 GPCPD1Q9NPB8 672 aa9.4□□□□□ -0.9
CLN5-217ENST00000637278 RALGAPBQ86X10 1494 aa9.4□□□□□ -0.9
CLN5-217ENST00000637278 CLCN1P35523 988 aa9.4□□□□□ -0.91
CLN5-217ENST00000637278 ANP32AP39687 249 aaKnown RBP9.4□□□□□ -0.91
CLN5-217ENST00000637278 PDAP1Q13442 181 aaKnown RBP9.4□□□□□ -0.91
CLN5-217ENST00000637278 ZNF394Q53GI3 561 aa9.4□□□□□ -0.91
CLN5-217ENST00000637278 MFSD4BQ5TF39 518 aa9.4□□□□□ -0.91
CLN5-217ENST00000637278 DDX56Q9NY93 547 aaKnown RBP9.4□□□□□ -0.91
CLN5-217ENST00000637278 ODR4Q5SWX8 454 aa9.39□□□□□ -0.91
CLN5-217ENST00000637278 MAP7D2Q96T17 732 aa9.39□□□□□ -0.91
CLN5-217ENST00000637278 TMUB1Q9BVT8 246 aa9.39□□□□□ -0.91
CLN5-217ENST00000637278 TSPYL2Q9H2G4 693 aaPredicted RBP9.39□□□□□ -0.91
CLN5-217ENST00000637278 TDO2P48775 406 aa9.39□□□□□ -0.91
CLN5-217ENST00000637278 SFMBT1Q9UHJ3 866 aa9.39□□□□□ -0.91
CLN5-217ENST00000637278 TNFRSF10BO14763 440 aa9.38□□□□□ -0.91
CLN5-217ENST00000637278 STK10O94804 968 aaKnown RBP9.38□□□□□ -0.91
CLN5-217ENST00000637278 CAPN2P17655 700 aa9.38□□□□□ -0.91
CLN5-217ENST00000637278 HSP90AB2PQ58FF8 381 aa9.38□□□□□ -0.91
CLN5-217ENST00000637278 TSC1Q92574 1164 aa9.38□□□□□ -0.91
CLN5-217ENST00000637278 NEUROD6Q96NK8 337 aa9.38□□□□□ -0.91
CLN5-217ENST00000637278 FRMD4BQ9Y2L6 1034 aa9.38□□□□□ -0.91
CLN5-217ENST00000637278 PHRF1Q9P1Y6 1649 aaKnown RBP9.38□□□□□ -0.91
CLN5-217ENST00000637278 VPS72Q15906 364 aa9.38□□□□□ -0.91
CLN5-217ENST00000637278 IL17RAQ96F46 866 aa9.38□□□□□ -0.91
CLN5-217ENST00000637278 CCDC94Q9BW85 323 aaPredicted RBP9.38□□□□□ -0.91
CLN5-217ENST00000637278 NUB1Q9Y5A7 615 aa9.38□□□□□ -0.91
CLN5-217ENST00000637278 WASLO00401 505 aaPredicted RBP9.38□□□□□ -0.91
CLN5-217ENST00000637278 USP17L8P0C7I0 530 aa9.38□□□□□ -0.91
CLN5-217ENST00000637278 TMC1Q8TDI8 760 aa9.38□□□□□ -0.91
CLN5-217ENST00000637278 BLMP54132 1417 aaPredicted RBP9.37□□□□□ -0.91
CLN5-217ENST00000637278 MAPK1P28482 360 aa9.37□□□□□ -0.91
CLN5-217ENST00000637278 PTGDRQ13258 359 aa9.37□□□□□ -0.91
CLN5-217ENST00000637278 DSG2Q14126 1118 aa9.37□□□□□ -0.91
CLN5-217ENST00000637278 C1QTNF12Q5T7M4 302 aa9.37□□□□□ -0.91
CLN5-217ENST00000637278 SKAP1Q86WV1 359 aa9.37□□□□□ -0.91
CLN5-217ENST00000637278 TMEM87AQ8NBN3 555 aa9.37□□□□□ -0.91
CLN5-217ENST00000637278 CABLES1Q8TDN4 633 aa9.37□□□□□ -0.91
CLN5-217ENST00000637278 TERF1P54274 439 aa9.37□□□□□ -0.91
CLN5-217ENST00000637278 ACRBPQ8NEB7 543 aa9.37□□□□□ -0.91
CLN5-217ENST00000637278 FBXO9Q9UK97 447 aaPredicted RBP9.37□□□□□ -0.91
CLN5-217ENST00000637278 RGPD1P0DJD0 1748 aa9.36□□□□□ -0.91
CLN5-217ENST00000637278 ZRSR2Q15696 482 aaKnown RBP9.36□□□□□ -0.91
CLN5-217ENST00000637278 IPO9Q96P70 1041 aaKnown RBP9.36□□□□□ -0.91
CLN5-217ENST00000637278 UBA5Q9GZZ9 404 aa9.36□□□□□ -0.91
CLN5-217ENST00000637278 BSDC1Q9NW68 430 aaPredicted RBP9.36□□□□□ -0.91
CLN5-217ENST00000637278 NOVA2Q9UNW9 492 aaKnown RBP9.36□□□□□ -0.91
CLN5-217ENST00000637278 XPCQ01831 940 aaPredicted RBP9.36□□□□□ -0.91
CLN5-217ENST00000637278 SETDB1Q15047 1291 aa9.36□□□□□ -0.91
CLN5-217ENST00000637278 ZC3H12AQ5D1E8 599 aaKnown RBP9.36□□□□□ -0.91
CLN5-217ENST00000637278 ZNF512BQ96KM6 892 aaPredicted RBP9.36□□□□□ -0.91
CLN5-217ENST00000637278 TTC39BQ5VTQ0 682 aaPredicted RBP9.35□□□□□ -0.91
CLN5-217ENST00000637278 USP48Q86UV5 1035 aa9.35□□□□□ -0.91
CLN5-217ENST00000637278 ZCRB1Q8TBF4 217 aaKnown RBP9.35□□□□□ -0.91
CLN5-217ENST00000637278 ITFG2Q969R8 447 aa9.35□□□□□ -0.91
CLN5-217ENST00000637278 GTPBP4Q9BZE4 634 aaKnown RBP9.35□□□□□ -0.91
CLN5-217ENST00000637278 ALG2Q9H553 416 aa9.35□□□□□ -0.91
CLN5-217ENST00000637278 FAM217BQ9NTX9 383 aaPredicted RBP9.35□□□□□ -0.91
CLN5-217ENST00000637278 TRAK1Q9UPV9 953 aa9.35□□□□□ -0.91
CLN5-217ENST00000637278 POLR3AO14802 1390 aaPredicted RBP9.35□□□□□ -0.91
CLN5-217ENST00000637278 QRICH2Q9H0J4 1663 aa9.35□□□□□ -0.91
CLN5-217ENST00000637278 CCDC172P0C7W6 258 aa9.35□□□□□ -0.91
CLN5-217ENST00000637278 IBSPP21815 317 aaPredicted RBP9.35□□□□□ -0.91
CLN5-217ENST00000637278 BRWD3Q6RI45 1802 aa9.35□□□□□ -0.91
CLN5-217ENST00000637278 NEXNQ0ZGT2 675 aa9.34□□□□□ -0.91
CLN5-217ENST00000637278 ARPC5LQ9BPX5 153 aa9.34□□□□□ -0.91
CLN5-217ENST00000637278 THSD7AQ9UPZ6 1657 aa9.34□□□□□ -0.91
CLN5-217ENST00000637278 TRIM6-TRIM34B2RNG4 842 aa9.34□□□□□ -0.91
CLN5-217ENST00000637278 TRIM34Q9BYJ4 488 aa9.34□□□□□ -0.91
CLN5-217ENST00000637278 LRRC27Q9C0I9 530 aa9.34□□□□□ -0.91
CLN5-217ENST00000637278 LDHAP00338 332 aaKnown RBP9.34□□□□□ -0.92
CLN5-217ENST00000637278 ERCC3P19447 782 aa9.34□□□□□ -0.92
CLN5-217ENST00000637278 PPP4CP60510 307 aa9.34□□□□□ -0.92
CLN5-217ENST00000637278 TNNT1P13805 278 aa9.33□□□□□ -0.92
CLN5-217ENST00000637278 KCNJ4P48050 445 aa9.33□□□□□ -0.92
CLN5-217ENST00000637278 MICALL1Q8N3F8 863 aa9.33□□□□□ -0.92
CLN5-217ENST00000637278 NGDNQ8NEJ9 315 aaKnown RBP9.33□□□□□ -0.92
CLN5-217ENST00000637278 MKNK1Q9BUB5 465 aa9.33□□□□□ -0.92
CLN5-217ENST00000637278 INTUQ9ULD6 942 aa9.33□□□□□ -0.92
CLN5-217ENST00000637278 TRPM1Q7Z4N2 1603 aa9.33□□□□□ -0.92
CLN5-217ENST00000637278 NRKQ7Z2Y5 1582 aa9.33□□□□□ -0.92
CLN5-217ENST00000637278 GIGYF1O75420 1035 aaPredicted RBP9.33□□□□□ -0.92
CLN5-217ENST00000637278 SF3B2Q13435 895 aaKnown RBP9.33□□□□□ -0.92
CLN5-217ENST00000637278 SPC25Q9HBM1 224 aa9.33□□□□□ -0.92
CLN5-217ENST00000637278 ZRANB1Q9UGI0 708 aa9.33□□□□□ -0.92
CLN5-217ENST00000637278 SMC3Q9UQE7 1217 aa9.33□□□□□ -0.92
CLN5-217ENST00000637278 PRR36Q9H6K5 1346 aa9.32□□□□□ -0.92
CLN5-217ENST00000637278 CFAP69A5D8W1 941 aa9.32□□□□□ -0.92
CLN5-217ENST00000637278 NAT1P18440 290 aa9.32□□□□□ -0.92
CLN5-217ENST00000637278 SAFB2Q14151 953 aaKnown RBP eCLIP9.32□□□□□ -0.92
CLN5-217ENST00000637278 MRPL58Q14197 206 aaKnown RBP9.32□□□□□ -0.92
CLN5-217ENST00000637278 ZNF746Q6NUN9 644 aaPredicted RBP9.32□□□□□ -0.92
CLN5-217ENST00000637278 PGBD3Q8N328 593 aa9.32□□□□□ -0.92
CLN5-217ENST00000637278 TCEAL9Q9UHQ7 104 aa9.32□□□□□ -0.92
CLN5-217ENST00000637278 LRP5O75197 1615 aa9.31□□□□□ -0.92
CLN5-217ENST00000637278 RRM1P23921 792 aa9.31□□□□□ -0.92
CLN5-217ENST00000637278 CALRP27797 417 aaKnown RBP9.31□□□□□ -0.92
CLN5-217ENST00000637278 RBM5P52756 815 aaKnown RBP eCLIP9.31□□□□□ -0.92
CLN5-217ENST00000637278 FANCCQ00597 558 aa9.31□□□□□ -0.92
CLN5-217ENST00000637278 LRRN4Q8WUT4 740 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms