RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PNMA5Q96PV4 448 aa5.38□□□□□ -1.55
SMARCB1-208ENST00000634926 C2orf49Q9BVC5 232 aaPredicted RBP5.38□□□□□ -1.55
SMARCB1-208ENST00000634926 SMG9Q9H0W8 520 aaKnown RBP5.38□□□□□ -1.55
SMARCB1-208ENST00000634926 ADGRE2Q9UHX3 823 aa5.38□□□□□ -1.55
SMARCB1-208ENST00000634926 RAXQ9Y2V3 346 aa5.38□□□□□ -1.55
SMARCB1-208ENST00000634926 PPP1R12BO60237 982 aaPredicted RBP5.37□□□□□ -1.55
SMARCB1-208ENST00000634926 MAP3K6O95382 1288 aa5.37□□□□□ -1.55
SMARCB1-208ENST00000634926 SETDB1Q15047 1291 aa5.37□□□□□ -1.55
SMARCB1-208ENST00000634926 WASHC4Q2M389 1173 aa5.37□□□□□ -1.55
SMARCB1-208ENST00000634926 EFCC1Q9HA90 598 aa5.37□□□□□ -1.55
SMARCB1-208ENST00000634926 SASH3O75995 380 aa5.36□□□□□ -1.55
SMARCB1-208ENST00000634926 WISP1O95388 367 aa5.36□□□□□ -1.55
SMARCB1-208ENST00000634926 INPP5BP32019 993 aa5.36□□□□□ -1.55
SMARCB1-208ENST00000634926 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
SMARCB1-208ENST00000634926 J3QW42 95 aa5.35□□□□□ -1.55
SMARCB1-208ENST00000634926 LGR5O75473 907 aa5.35□□□□□ -1.55
SMARCB1-208ENST00000634926 GLB1P16278 677 aa5.35□□□□□ -1.55
SMARCB1-208ENST00000634926 SOX11P35716 441 aa5.35□□□□□ -1.55
SMARCB1-208ENST00000634926 GPLD1P80108 840 aa5.35□□□□□ -1.55
SMARCB1-208ENST00000634926 DTX1Q86Y01 620 aa5.35□□□□□ -1.55
SMARCB1-208ENST00000634926 NFATC2IPQ8NCF5 419 aa5.35□□□□□ -1.55
SMARCB1-208ENST00000634926 MRPL18Q9H0U6 180 aaKnown RBP5.35□□□□□ -1.55
SMARCB1-208ENST00000634926 STOML1Q9UBI4 398 aa5.35□□□□□ -1.55
SMARCB1-208ENST00000634926 ATAD2Q6PL18 1390 aa5.34□□□□□ -1.55
SMARCB1-208ENST00000634926 TM4SF5O14894 197 aa5.34□□□□□ -1.55
SMARCB1-208ENST00000634926 LZTS3O60299 673 aaPredicted RBP5.34□□□□□ -1.55
SMARCB1-208ENST00000634926 PRKCSHP14314 528 aaPredicted RBP5.34□□□□□ -1.55
SMARCB1-208ENST00000634926 IER5Q5VY09 327 aa5.34□□□□□ -1.55
SMARCB1-208ENST00000634926 OGFOD2Q6N063 350 aa5.34□□□□□ -1.55
SMARCB1-208ENST00000634926 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.34□□□□□ -1.55
SMARCB1-208ENST00000634926 TRIM42Q8IWZ5 723 aa5.34□□□□□ -1.55
SMARCB1-208ENST00000634926 GALNT11Q8NCW6 608 aa5.34□□□□□ -1.55
SMARCB1-208ENST00000634926 ADAMTS19Q8TE59 1207 aa5.34□□□□□ -1.55
SMARCB1-208ENST00000634926 COL26A1Q96A83 441 aa5.34□□□□□ -1.55
SMARCB1-208ENST00000634926 KCNK4Q9NYG8 393 aa5.34□□□□□ -1.55
SMARCB1-208ENST00000634926 KLK14Q9P0G3 267 aa5.34□□□□□ -1.55
SMARCB1-208ENST00000634926 USP20Q9Y2K6 914 aa5.34□□□□□ -1.55
SMARCB1-208ENST00000634926 HMX2A2RU54 273 aa5.33□□□□□ -1.56
SMARCB1-208ENST00000634926 TGFBR3LH3BV60 316 aa5.33□□□□□ -1.56
SMARCB1-208ENST00000634926 NFIAQ12857 509 aa5.33□□□□□ -1.56
SMARCB1-208ENST00000634926 IL22RA1Q8N6P7 574 aa5.33□□□□□ -1.56
SMARCB1-208ENST00000634926 C7orf69Q9H7B7 122 aa5.33□□□□□ -1.56
SMARCB1-208ENST00000634926 PRM3Q9NNZ6 103 aa5.33□□□□□ -1.56
SMARCB1-208ENST00000634926 M0R2N6 131 aa5.32□□□□□ -1.56
SMARCB1-208ENST00000634926 EIF2AK2P19525 551 aaKnown RBP5.32□□□□□ -1.56
SMARCB1-208ENST00000634926 HOXA10P31260 410 aaPredicted RBP5.32□□□□□ -1.56
SMARCB1-208ENST00000634926 IDH3AP50213 366 aa5.32□□□□□ -1.56
SMARCB1-208ENST00000634926 GDF6Q6KF10 455 aaPredicted RBP5.32□□□□□ -1.56
SMARCB1-208ENST00000634926 ADAMTSL4Q6UY14 1074 aa5.32□□□□□ -1.56
SMARCB1-208ENST00000634926 ABI1Q8IZP0 508 aa5.32□□□□□ -1.56
SMARCB1-208ENST00000634926 STAG2Q8N3U4 1231 aa5.32□□□□□ -1.56
SMARCB1-208ENST00000634926 OGFOD1Q8N543 542 aa5.32□□□□□ -1.56
SMARCB1-208ENST00000634926 CHMP7Q8WUX9 453 aaPredicted RBP5.32□□□□□ -1.56
SMARCB1-208ENST00000634926 SCG3Q8WXD2 468 aaKnown RBP5.32□□□□□ -1.56
SMARCB1-208ENST00000634926 PLD4Q96BZ4 506 aa5.32□□□□□ -1.56
SMARCB1-208ENST00000634926 PTCD1O75127 700 aaKnown RBP5.31□□□□□ -1.56
SMARCB1-208ENST00000634926 RARAP10276 462 aa5.31□□□□□ -1.56
SMARCB1-208ENST00000634926 COL19A1Q14993 1142 aa5.31□□□□□ -1.56
SMARCB1-208ENST00000634926 RTN1Q16799 776 aa5.31□□□□□ -1.56
SMARCB1-208ENST00000634926 NFXL1Q6ZNB6 911 aa5.31□□□□□ -1.56
SMARCB1-208ENST00000634926 ZNF594Q96JF6 807 aaPredicted RBP5.31□□□□□ -1.56
SMARCB1-208ENST00000634926 UCN2Q96RP3 112 aa5.31□□□□□ -1.56
SMARCB1-208ENST00000634926 TRIM33Q9UPN9 1127 aa5.31□□□□□ -1.56
SMARCB1-208ENST00000634926 CHMP3Q9Y3E7 222 aa5.31□□□□□ -1.56
SMARCB1-208ENST00000634926 USP17L3A6NCW0 530 aa5.3□□□□□ -1.56
SMARCB1-208ENST00000634926 USP17L4A6NCW7 530 aa5.3□□□□□ -1.56
SMARCB1-208ENST00000634926 OPLAHO14841 1288 aa5.3□□□□□ -1.56
SMARCB1-208ENST00000634926 WNT11O96014 354 aa5.3□□□□□ -1.56
SMARCB1-208ENST00000634926 C8AP07357 584 aa5.3□□□□□ -1.56
SMARCB1-208ENST00000634926 NRLP54845 237 aa5.3□□□□□ -1.56
SMARCB1-208ENST00000634926 PCSK7Q16549 785 aa5.3□□□□□ -1.56
SMARCB1-208ENST00000634926 TPRNQ4KMQ1 711 aa5.3□□□□□ -1.56
SMARCB1-208ENST00000634926 RNF43Q68DV7 783 aa5.3□□□□□ -1.56
SMARCB1-208ENST00000634926 USP17L2Q6R6M4 530 aa5.3□□□□□ -1.56
SMARCB1-208ENST00000634926 USP17L1Q7RTZ2 530 aa5.3□□□□□ -1.56
SMARCB1-208ENST00000634926 TRIM50Q86XT4 487 aa5.3□□□□□ -1.56
SMARCB1-208ENST00000634926 SIX5Q8N196 739 aa5.3□□□□□ -1.56
SMARCB1-208ENST00000634926 COG6Q9Y2V7 657 aa5.3□□□□□ -1.56
SMARCB1-208ENST00000634926 GSC2O15499 205 aa5.29□□□□□ -1.56
SMARCB1-208ENST00000634926 DHX15O43143 795 aaKnown RBP5.29□□□□□ -1.56
SMARCB1-208ENST00000634926 RASA1P20936 1047 aa5.29□□□□□ -1.56
SMARCB1-208ENST00000634926 PLEKHM2Q8IWE5 1019 aa5.29□□□□□ -1.56
SMARCB1-208ENST00000634926 LARGE2Q8N3Y3 721 aa5.29□□□□□ -1.56
SMARCB1-208ENST00000634926 FAM46AQ96IP4 442 aaKnown RBP5.29□□□□□ -1.56
SMARCB1-208ENST00000634926 NSUN5Q96P11 429 aaKnown RBP5.29□□□□□ -1.56
SMARCB1-208ENST00000634926 TLR7Q9NYK1 1049 aaKnown RBP5.29□□□□□ -1.56
SMARCB1-208ENST00000634926 LOC102724428A0A0B4J2F2 783 aa5.28□□□□□ -1.56
SMARCB1-208ENST00000634926 POM121CA8CG34 1229 aa5.28□□□□□ -1.56
SMARCB1-208ENST00000634926 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
SMARCB1-208ENST00000634926 SIK1P57059 783 aa5.28□□□□□ -1.56
SMARCB1-208ENST00000634926 MCM6Q14566 821 aa5.28□□□□□ -1.56
SMARCB1-208ENST00000634926 INTS5Q6P9B9 1019 aaKnown RBP5.28□□□□□ -1.56
SMARCB1-208ENST00000634926 TXNDC11Q6PKC3 985 aa5.28□□□□□ -1.56
SMARCB1-208ENST00000634926 KIAA1211Q6ZU35 1233 aa5.28□□□□□ -1.56
SMARCB1-208ENST00000634926 SHKBP1Q8TBC3 707 aa5.28□□□□□ -1.56
SMARCB1-208ENST00000634926 KRTAP4-5Q9BYR2 181 aa5.28□□□□□ -1.56
SMARCB1-208ENST00000634926 MKRN1Q9UHC7 482 aaKnown RBP5.28□□□□□ -1.56
SMARCB1-208ENST00000634926 PALM3A6NDB9 673 aaPredicted RBP5.27□□□□□ -1.57
SMARCB1-208ENST00000634926 MMP20O60882 483 aa5.27□□□□□ -1.57
SMARCB1-208ENST00000634926 MICAL2O94851 1124 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms