RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 AMOTL2Q9Y2J4 779 aa13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 FLT4P35916 1363 aa13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 AATKQ6ZMQ8 1374 aa13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 UBXN4Q92575 508 aa13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 ZNF396Q96N95 335 aaPredicted RBP13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 TTC41PQ6P2S7 1318 aa13.34□□□□□ -0.27
PCDHGA11-203ENST00000622044 A0A1B0GVL5 298 aa13.33□□□□□ -0.27
PCDHGA11-203ENST00000622044 HAND2P61296 217 aa13.33□□□□□ -0.27
PCDHGA11-203ENST00000622044 APOBRQ0VD83 1088 aa13.33□□□□□ -0.27
PCDHGA11-203ENST00000622044 CPSF1Q10570 1443 aaKnown RBP13.33□□□□□ -0.27
PCDHGA11-203ENST00000622044 CCDC144BQ3MJ40 725 aa13.33□□□□□ -0.27
PCDHGA11-203ENST00000622044 OTUD7BQ6GQQ9 843 aa13.33□□□□□ -0.27
PCDHGA11-203ENST00000622044 CCDC144CPQ8IYA2 1237 aa13.33□□□□□ -0.27
PCDHGA11-203ENST00000622044 BICC1Q9H694 974 aaKnown RBP13.33□□□□□ -0.27
PCDHGA11-203ENST00000622044 TOMM22Q9NS69 142 aa13.33□□□□□ -0.27
PCDHGA11-203ENST00000622044 MROH1Q8NDA8 1641 aa13.33□□□□□ -0.28
PCDHGA11-203ENST00000622044 USP27XA6NNY8 438 aa13.33□□□□□ -0.28
PCDHGA11-203ENST00000622044 RPS6KB1P23443 525 aa13.33□□□□□ -0.28
PCDHGA11-203ENST00000622044 LMOD1P29536 600 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA11-203ENST00000622044 EAF2Q96CJ1 260 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA11-203ENST00000622044 CCDC85AQ96PX6 553 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA11-203ENST00000622044 SEC62Q99442 399 aaKnown RBP13.33□□□□□ -0.28
PCDHGA11-203ENST00000622044 MYD88Q99836 296 aa13.33□□□□□ -0.28
PCDHGA11-203ENST00000622044 SKIDA1Q1XH10 827 aa13.33□□□□□ -0.28
PCDHGA11-203ENST00000622044 CFAP100Q494V2 611 aa13.33□□□□□ -0.28
PCDHGA11-203ENST00000622044 C11orf57Q6ZUT1 292 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA11-203ENST00000622044 ARGLU1Q9NWB6 273 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA11-203ENST00000622044 AOX1Q06278 1338 aa13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 MYO3AQ8NEV4 1616 aa13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 ATP5J2-PTCD1G3V325 749 aa13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 PTCD1O75127 700 aaKnown RBP13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 PTPN21Q16825 1174 aa13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 DNAI1Q9UI46 699 aa13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 TAF6LQ9Y6J9 622 aa13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 ZBTB22O15209 634 aa13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 APPP05067 770 aa13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 UTP14CQ5TAP6 766 aaKnown RBP13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 ZSWIM4Q9H7M6 989 aa13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 ATP7BP35670 1465 aa13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 VWDEQ8N2E2 1590 aa13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 DEPDC5O75140 1603 aa13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 SLC39A6Q13433 755 aa13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 KRT32Q14532 448 aa13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 ZNF589Q86UQ0 364 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 NEXMIFQ5QGS0 1516 aa13.32□□□□□ -0.28
PCDHGA11-203ENST00000622044 MAP3K5Q99683 1374 aa13.31□□□□□ -0.28
PCDHGA11-203ENST00000622044 GOLIM4O00461 696 aa13.31□□□□□ -0.28
PCDHGA11-203ENST00000622044 FKBP4Q02790 459 aaKnown RBP eCLIP13.31□□□□□ -0.28
PCDHGA11-203ENST00000622044 ZNF397Q8NF99 534 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA11-203ENST00000622044 IFNKQ9P0W0 207 aa13.31□□□□□ -0.28
PCDHGA11-203ENST00000622044 MAP2P11137 1827 aaKnown RBP13.31□□□□□ -0.28
PCDHGA11-203ENST00000622044 GRM8O00222 908 aa13.31□□□□□ -0.28
PCDHGA11-203ENST00000622044 SLU7O95391 586 aaKnown RBP13.31□□□□□ -0.28
PCDHGA11-203ENST00000622044 TEX35Q5T0J7 233 aa13.31□□□□□ -0.28
PCDHGA11-203ENST00000622044 ERCC6LQ2NKX8 1250 aa13.31□□□□□ -0.28
PCDHGA11-203ENST00000622044 PLEKHO1Q53GL0 409 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA11-203ENST00000622044 PRAMEF22A3QJZ6 481 aa13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 HOXC9P31274 260 aa13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 COL9A3Q14050 684 aaPredicted RBP13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 PROSER3Q2NL68 480 aa13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 TAF7LQ5H9L4 462 aa13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 UBE3BQ7Z3V4 1068 aa13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 LRRC8AQ8IWT6 810 aa13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 NOL10Q9BSC4 688 aaKnown RBP13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 ARHGEF28Q8N1W1 1705 aaKnown RBP13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 PTPDC1A2A3K4 754 aa13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 CHGBP05060 677 aa13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 ARHGAP29Q52LW3 1261 aa13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 BEND3Q5T5X7 828 aa13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 SUCLG2Q96I99 432 aa13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 ESCO1Q5FWF5 840 aa13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 TMCO3Q6UWJ1 677 aa13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 SNRKQ9NRH2 765 aa13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 TCHHQ07283 1943 aa13.3□□□□□ -0.28
PCDHGA11-203ENST00000622044 SALL3Q9BXA9 1300 aa13.29□□□□□ -0.28
PCDHGA11-203ENST00000622044 PPLO60437 1756 aa13.29□□□□□ -0.28
PCDHGA11-203ENST00000622044 CPS1P31327 1500 aa13.29□□□□□ -0.28
PCDHGA11-203ENST00000622044 RALYLQ86SE5 291 aaKnown RBP13.29□□□□□ -0.28
PCDHGA11-203ENST00000622044 TTC5Q8N0Z6 440 aa13.29□□□□□ -0.28
PCDHGA11-203ENST00000622044 PGBD1Q96JS3 809 aa13.29□□□□□ -0.28
PCDHGA11-203ENST00000622044 ST7Q9NRC1 585 aa13.29□□□□□ -0.28
PCDHGA11-203ENST00000622044 DIP2BQ9P265 1576 aa13.29□□□□□ -0.28
PCDHGA11-203ENST00000622044 MARCKSP29966 332 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA11-203ENST00000622044 USP32Q8NFA0 1604 aa13.29□□□□□ -0.28
PCDHGA11-203ENST00000622044 HSP90AB3PQ58FF7 597 aa13.28□□□□□ -0.28
PCDHGA11-203ENST00000622044 USP28Q96RU2 1077 aa13.28□□□□□ -0.28
PCDHGA11-203ENST00000622044 NLRP2Q9NX02 1062 aa13.28□□□□□ -0.28
PCDHGA11-203ENST00000622044 NECTIN1Q15223 517 aa13.28□□□□□ -0.28
PCDHGA11-203ENST00000622044 TM6SF1Q9BZW5 370 aa13.28□□□□□ -0.28
PCDHGA11-203ENST00000622044 SLC3A2P08195 630 aaKnown RBP13.28□□□□□ -0.28
PCDHGA11-203ENST00000622044 FUCA2Q9BTY2 467 aa13.28□□□□□ -0.28
PCDHGA11-203ENST00000622044 ZSCAN16Q9H4T2 348 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA11-203ENST00000622044 CTAGE5O15320 804 aa13.27□□□□□ -0.28
PCDHGA11-203ENST00000622044 SLFNL1Q499Z3 407 aa13.27□□□□□ -0.28
PCDHGA11-203ENST00000622044 KSR2Q6VAB6 950 aa13.27□□□□□ -0.28
PCDHGA11-203ENST00000622044 THEMISQ8N1K5 641 aaPredicted RBP13.27□□□□□ -0.28
PCDHGA11-203ENST00000622044 CCDC34Q96HJ3 373 aa13.27□□□□□ -0.28
PCDHGA11-203ENST00000622044 CRB1P82279 1406 aa13.27□□□□□ -0.28
PCDHGA11-203ENST00000622044 NEMFO60524 1076 aa13.27□□□□□ -0.29
PCDHGA11-203ENST00000622044 EIF4A1P60842 406 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms