RNA–Protein interactions for RNA: ENST00000616803.4

CBWD1-224, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-224ENST00000616803 TRIP4Q15650 581 aaPredicted RBP7.02□□□□□ -1.29
CBWD1-224ENST00000616803 ILDR2Q71H61 639 aa7.02□□□□□ -1.29
CBWD1-224ENST00000616803 RGL4Q8IZJ4 473 aa7.02□□□□□ -1.29
CBWD1-224ENST00000616803 VTI1AQ96AJ9 217 aa7.02□□□□□ -1.29
CBWD1-224ENST00000616803 GNB5O14775 395 aa7.01□□□□□ -1.29
CBWD1-224ENST00000616803 FURINP09958 794 aa7.01□□□□□ -1.29
CBWD1-224ENST00000616803 NID1P14543 1247 aa7.01□□□□□ -1.29
CBWD1-224ENST00000616803 C16orf46Q6P387 395 aa7.01□□□□□ -1.29
CBWD1-224ENST00000616803 CD163Q86VB7 1156 aa7.01□□□□□ -1.29
CBWD1-224ENST00000616803 NUDT8Q8WV74 236 aa7.01□□□□□ -1.29
CBWD1-224ENST00000616803 SLC6A14Q9UN76 642 aa7.01□□□□□ -1.29
CBWD1-224ENST00000616803 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.01□□□□□ -1.29
CBWD1-224ENST00000616803 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.01□□□□□ -1.29
CBWD1-224ENST00000616803 C1QTNF9BB2RNN3 333 aa7□□□□□ -1.29
CBWD1-224ENST00000616803 ATP2B4P23634 1241 aa7□□□□□ -1.29
CBWD1-224ENST00000616803 ARSDP51689 593 aa7□□□□□ -1.29
CBWD1-224ENST00000616803 HFE2Q6ZVN8 426 aa7□□□□□ -1.29
CBWD1-224ENST00000616803 CMTR1Q8N1G2 835 aaKnown RBP7□□□□□ -1.29
CBWD1-224ENST00000616803 UBE2OQ9C0C9 1292 aaKnown RBP7□□□□□ -1.29
CBWD1-224ENST00000616803 GRIK5Q16478 980 aa6.99□□□□□ -1.29
CBWD1-224ENST00000616803 ATCAYQ86WG3 371 aa6.99□□□□□ -1.29
CBWD1-224ENST00000616803 TIMELESSQ9UNS1 1208 aa6.99□□□□□ -1.29
CBWD1-224ENST00000616803 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.98□□□□□ -1.29
CBWD1-224ENST00000616803 J3QW42 95 aa6.98□□□□□ -1.29
CBWD1-224ENST00000616803 ALAS2P22557 587 aa6.98□□□□□ -1.29
CBWD1-224ENST00000616803 MTMR3Q13615 1198 aa6.98□□□□□ -1.29
CBWD1-224ENST00000616803 HIF1AQ16665 826 aa6.98□□□□□ -1.29
CBWD1-224ENST00000616803 ADAMTSL4Q6UY14 1074 aa6.98□□□□□ -1.29
CBWD1-224ENST00000616803 COL26A1Q96A83 441 aa6.98□□□□□ -1.29
CBWD1-224ENST00000616803 MMP20O60882 483 aa6.97□□□□□ -1.29
CBWD1-224ENST00000616803 XYLBO75191 536 aa6.97□□□□□ -1.29
CBWD1-224ENST00000616803 CPB1P15086 417 aa6.97□□□□□ -1.29
CBWD1-224ENST00000616803 SSFA2P28290 1259 aa6.97□□□□□ -1.29
CBWD1-224ENST00000616803 PERM1Q5SV97 790 aa6.97□□□□□ -1.29
CBWD1-224ENST00000616803 COL13A1Q5TAT6 717 aaPredicted RBP6.97□□□□□ -1.29
CBWD1-224ENST00000616803 DHX32Q7L7V1 743 aaKnown RBP6.97□□□□□ -1.29
CBWD1-224ENST00000616803 Q8N3U1 123 aa6.97□□□□□ -1.29
CBWD1-224ENST00000616803 LPIN3Q9BQK8 851 aa6.97□□□□□ -1.29
CBWD1-224ENST00000616803 KRTAP9-2Q9BYQ4 174 aa6.97□□□□□ -1.29
CBWD1-224ENST00000616803 EGFRP00533 1210 aa6.96□□□□□ -1.3
CBWD1-224ENST00000616803 AFF1P51825 1210 aaKnown RBP6.96□□□□□ -1.3
CBWD1-224ENST00000616803 GRIK4Q16099 956 aa6.96□□□□□ -1.3
CBWD1-224ENST00000616803 PSAPL1Q6NUJ1 521 aa6.96□□□□□ -1.3
CBWD1-224ENST00000616803 GPR152Q8TDT2 470 aa6.96□□□□□ -1.3
CBWD1-224ENST00000616803 PNMA5Q96PV4 448 aa6.96□□□□□ -1.3
CBWD1-224ENST00000616803 A6NHS1 94 aa6.95□□□□□ -1.3
CBWD1-224ENST00000616803 MAP3K6O95382 1288 aa6.95□□□□□ -1.3
CBWD1-224ENST00000616803 RARAP10276 462 aa6.95□□□□□ -1.3
CBWD1-224ENST00000616803 BRD2P25440 801 aaKnown RBP6.95□□□□□ -1.3
CBWD1-224ENST00000616803 ALYREFQ86V81 257 aaKnown RBP6.95□□□□□ -1.3
CBWD1-224ENST00000616803 TRPM4Q8TD43 1214 aa6.95□□□□□ -1.3
CBWD1-224ENST00000616803 ARID3AQ99856 593 aa6.95□□□□□ -1.3
CBWD1-224ENST00000616803 PRDM6Q9NQX0 595 aa6.95□□□□□ -1.3
CBWD1-224ENST00000616803 CYP2E1P05181 493 aaPredicted RBP6.94□□□□□ -1.3
CBWD1-224ENST00000616803 ITGB7P26010 798 aa6.94□□□□□ -1.3
CBWD1-224ENST00000616803 ZAP70P43403 619 aa6.94□□□□□ -1.3
CBWD1-224ENST00000616803 FAM35AQ86V20 835 aa6.94□□□□□ -1.3
CBWD1-224ENST00000616803 JPH1Q9HDC5 661 aaPredicted RBP6.94□□□□□ -1.3
CBWD1-224ENST00000616803 TLR7Q9NYK1 1049 aaKnown RBP6.94□□□□□ -1.3
CBWD1-224ENST00000616803 STIM2Q9P246 746 aa6.94□□□□□ -1.3
CBWD1-224ENST00000616803 KRTAP9-6A0A140TA67 174 aa6.93□□□□□ -1.3
CBWD1-224ENST00000616803 NEUROD1Q13562 356 aa6.93□□□□□ -1.3
CBWD1-224ENST00000616803 SHISA2Q6UWI4 295 aa6.93□□□□□ -1.3
CBWD1-224ENST00000616803 DMRTC2Q8IXT2 367 aaPredicted RBP6.93□□□□□ -1.3
CBWD1-224ENST00000616803 GTF3C2Q8WUA4 911 aaPredicted RBP6.93□□□□□ -1.3
CBWD1-224ENST00000616803 GGNBP2Q9H3C7 697 aa6.93□□□□□ -1.3
CBWD1-224ENST00000616803 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.93□□□□□ -1.3
CBWD1-224ENST00000616803 PTCD1O75127 700 aaKnown RBP6.92□□□□□ -1.3
CBWD1-224ENST00000616803 NSUN5Q96P11 429 aaKnown RBP6.92□□□□□ -1.3
CBWD1-224ENST00000616803 ANO2Q9NQ90 1003 aa6.92□□□□□ -1.3
CBWD1-224ENST00000616803 A0A0A0MRY4 1105 aa6.91□□□□□ -1.3
CBWD1-224ENST00000616803 LILRB5O75023 590 aa6.91□□□□□ -1.3
CBWD1-224ENST00000616803 SELPP16109 830 aa6.91□□□□□ -1.3
CBWD1-224ENST00000616803 EPB42P16452 691 aa6.91□□□□□ -1.3
CBWD1-224ENST00000616803 ECM1Q16610 540 aa6.91□□□□□ -1.3
CBWD1-224ENST00000616803 TRAPPC3LQ5T215 181 aa6.91□□□□□ -1.3
CBWD1-224ENST00000616803 PSMG3-AS1Q96PY0 264 aa6.91□□□□□ -1.3
CBWD1-224ENST00000616803 SMG9Q9H0W8 520 aaKnown RBP6.91□□□□□ -1.3
CBWD1-224ENST00000616803 CNTN3Q9P232 1028 aa6.91□□□□□ -1.3
CBWD1-224ENST00000616803 LOC102724428A0A0B4J2F2 783 aa6.9□□□□□ -1.3
CBWD1-224ENST00000616803 PPP1R15AO75807 674 aaPredicted RBP6.9□□□□□ -1.3
CBWD1-224ENST00000616803 RGS9O75916 674 aaPredicted RBP6.9□□□□□ -1.3
CBWD1-224ENST00000616803 MPSTP25325 297 aa6.9□□□□□ -1.3
CBWD1-224ENST00000616803 SIK1P57059 783 aa6.9□□□□□ -1.3
CBWD1-224ENST00000616803 GPLD1P80108 840 aa6.9□□□□□ -1.3
CBWD1-224ENST00000616803 DOC2BQ14184 412 aa6.9□□□□□ -1.3
CBWD1-224ENST00000616803 NUDT16Q96DE0 195 aaKnown RBP6.9□□□□□ -1.3
CBWD1-224ENST00000616803 EFCC1Q9HA90 598 aa6.9□□□□□ -1.3
CBWD1-224ENST00000616803 TMEM63CQ9P1W3 806 aa6.9□□□□□ -1.3
CBWD1-224ENST00000616803 UBAP1LF5GYI3 381 aa6.89□□□□□ -1.31
CBWD1-224ENST00000616803 PIK3R2O00459 728 aa6.89□□□□□ -1.31
CBWD1-224ENST00000616803 ACPPP15309 386 aa6.89□□□□□ -1.31
CBWD1-224ENST00000616803 NRLP54845 237 aa6.89□□□□□ -1.31
CBWD1-224ENST00000616803 NLRP13Q86W25 1043 aa6.89□□□□□ -1.31
CBWD1-224ENST00000616803 C11orf16Q9NQ32 467 aa6.89□□□□□ -1.31
CBWD1-224ENST00000616803 NOP53Q9NZM5 478 aaKnown RBP6.89□□□□□ -1.31
CBWD1-224ENST00000616803 DEAF1O75398 565 aaPredicted RBP6.88□□□□□ -1.31
CBWD1-224ENST00000616803 SPATA31C1P0DKV0 1188 aa6.88□□□□□ -1.31
CBWD1-224ENST00000616803 EIF1AXP47813 144 aaKnown RBP6.88□□□□□ -1.31
CBWD1-224ENST00000616803 ATP11AP98196 1134 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms