RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 SPECC1Q5M775 1068 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 ZFYVE27Q5T4F4 411 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 TAF3Q5VWG9 929 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 ZSCAN25Q6NSZ9 544 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 TMCO3Q6UWJ1 677 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 RUFY3Q7L099 469 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 PLEKHF1Q96S99 279 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 MAST1Q9Y2H9 1570 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 ZNF521Q96K83 1311 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 A0A087WWV3 80 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 H0YHG0 523 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 JAK2O60674 1132 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 EIF5P55010 431 aaKnown RBP4.41□□□□□ -1.7
RNF38-210ENST00000611646 SETQ01105 290 aaPredicted RBP4.41□□□□□ -1.7
RNF38-210ENST00000611646 KSR2Q6VAB6 950 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 LEKR1Q6ZMV7 388 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 CDC37L1Q7L3B6 337 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 GPIHBP1Q8IV16 184 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 TRMT2AQ8IZ69 625 aaKnown RBP4.41□□□□□ -1.7
RNF38-210ENST00000611646 FAM200AQ8TCP9 573 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 VAT1LQ9HCJ6 419 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 GNL3LQ9NVN8 582 aaKnown RBP4.41□□□□□ -1.7
RNF38-210ENST00000611646 CWC25Q9NXE8 425 aaPredicted RBP4.41□□□□□ -1.7
RNF38-210ENST00000611646 CCDC66A2RUB6 948 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 DYNC1I1O14576 645 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 CCP110O43303 1012 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 IGHMBP2P38935 993 aaKnown RBP4.41□□□□□ -1.7
RNF38-210ENST00000611646 SSRP1Q08945 709 aaKnown RBP4.41□□□□□ -1.7
RNF38-210ENST00000611646 KIF4BQ2VIQ3 1234 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 KIAA1328Q86T90 577 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 CCDC43Q96MW1 224 aaKnown RBP4.41□□□□□ -1.7
RNF38-210ENST00000611646 NUP88Q99567 741 aaPredicted RBP4.41□□□□□ -1.7
RNF38-210ENST00000611646 SEPT11Q9NVA2 429 aaKnown RBP4.41□□□□□ -1.7
RNF38-210ENST00000611646 DNAI1Q9UI46 699 aa4.41□□□□□ -1.7
RNF38-210ENST00000611646 BCORL1Q5H9F3 1711 aa4.4□□□□□ -1.7
RNF38-210ENST00000611646 STARD3NLO95772 234 aa4.4□□□□□ -1.7
RNF38-210ENST00000611646 RBM5P52756 815 aaKnown RBP eCLIP4.4□□□□□ -1.7
RNF38-210ENST00000611646 MCMDC2Q4G0Z9 681 aa4.4□□□□□ -1.7
RNF38-210ENST00000611646 CCDC181Q5TID7 509 aa4.4□□□□□ -1.7
RNF38-210ENST00000611646 MIGA1Q8NAN2 632 aa4.4□□□□□ -1.7
RNF38-210ENST00000611646 ZNHIT6Q9NWK9 470 aaKnown RBP4.4□□□□□ -1.7
RNF38-210ENST00000611646 NSFL1CQ9UNZ2 370 aaKnown RBP4.4□□□□□ -1.7
RNF38-210ENST00000611646 WDR7Q9Y4E6 1490 aa4.4□□□□□ -1.7
RNF38-210ENST00000611646 PTPDC1A2A3K4 754 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 CHL1O00533 1208 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 KCNA6P17658 529 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 IARSP41252 1262 aaKnown RBP4.4□□□□□ -1.71
RNF38-210ENST00000611646 MATR3P43243 847 aaKnown RBP eCLIP4.4□□□□□ -1.71
RNF38-210ENST00000611646 STX17P56962 302 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 GNG11P61952 73 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 PPARDQ03181 441 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 PTH1RQ03431 593 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 CT47A1Q5JQC4 288 aaPredicted RBP4.4□□□□□ -1.71
RNF38-210ENST00000611646 ACSBG1Q96GR2 724 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 PAG1Q9NWQ8 432 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 DACH1Q9UI36 760 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 NOL7Q9UMY1 257 aaKnown RBP4.4□□□□□ -1.71
RNF38-210ENST00000611646 AKAP2Q9Y2D5 859 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 MPHOSPH10O00566 681 aaKnown RBP4.4□□□□□ -1.71
RNF38-210ENST00000611646 SNRPA1P09661 255 aaKnown RBP4.4□□□□□ -1.71
RNF38-210ENST00000611646 ANAPC15P60006 121 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 SLC9C2Q5TAH2 1124 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 USP34Q70CQ2 3546 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 PBRM1Q86U86 1689 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 SIRT2Q8IXJ6 389 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 IFNL2Q8IZJ0 200 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 SEC62Q99442 399 aaKnown RBP4.4□□□□□ -1.71
RNF38-210ENST00000611646 ALG1Q9BT22 464 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 TSPYL1Q9H0U9 437 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 ACBD3Q9H3P7 528 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 ANTXR1Q9H6X2 564 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 CTDP1Q9Y5B0 961 aaPredicted RBP4.4□□□□□ -1.71
RNF38-210ENST00000611646 CEP170Q5SW79 1584 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 FAM170AA1A519 330 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 ANKRD18BA2A2Z9 1011 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 SLC27A2O14975 620 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 PRC1O43663 620 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 HMGB1P09429 215 aaKnown RBP4.4□□□□□ -1.71
RNF38-210ENST00000611646 SYKP43405 635 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 UBASH3AP57075 661 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 PTPN21Q16825 1174 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 SUCLG2Q96I99 432 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 PLIN2Q99541 437 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 DBNDD2Q9BQY9 259 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 MYL10Q9BUA6 226 aa4.4□□□□□ -1.71
RNF38-210ENST00000611646 SRRTQ9BXP5 876 aaKnown RBP4.4□□□□□ -1.71
RNF38-210ENST00000611646 ZNF219Q9P2Y4 722 aaPredicted RBP4.4□□□□□ -1.71
RNF38-210ENST00000611646 ZNF518AQ6AHZ1 1483 aa4.39□□□□□ -1.71
RNF38-210ENST00000611646 INSRP06213 1382 aa4.39□□□□□ -1.71
RNF38-210ENST00000611646 TNRQ92752 1358 aa4.39□□□□□ -1.71
RNF38-210ENST00000611646 MAP3K5Q99683 1374 aa4.39□□□□□ -1.71
RNF38-210ENST00000611646 CCDC171Q6TFL3 1326 aa4.39□□□□□ -1.71
RNF38-210ENST00000611646 PRAMEF22A3QJZ6 481 aa4.39□□□□□ -1.71
RNF38-210ENST00000611646 U2AF2P26368 475 aaKnown RBP eCLIP4.39□□□□□ -1.713e-6■■■□□ 16.8
RNF38-210ENST00000611646 KARSQ15046 597 aaKnown RBP4.39□□□□□ -1.71
RNF38-210ENST00000611646 UVSSAQ2YD98 709 aa4.39□□□□□ -1.71
RNF38-210ENST00000611646 SYT10Q6XYQ8 523 aa4.39□□□□□ -1.71
RNF38-210ENST00000611646 NCOA7Q8NI08 942 aa4.39□□□□□ -1.71
RNF38-210ENST00000611646 CCDC12Q8WUD4 166 aaPredicted RBP4.39□□□□□ -1.71
RNF38-210ENST00000611646 IFNKQ9P0W0 207 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms