RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 PRRT3Q5FWE3 981 aa5.73□□□□□ -1.49
IGHV3-29-201ENST00000604817 ELOA3Q8NG57 546 aa5.73□□□□□ -1.49
IGHV3-29-201ENST00000604817 TRIM11Q96F44 468 aa5.73□□□□□ -1.49
IGHV3-29-201ENST00000604817 SLC4A9Q96Q91 983 aa5.73□□□□□ -1.49
IGHV3-29-201ENST00000604817 MARK1Q9P0L2 795 aa5.73□□□□□ -1.49
IGHV3-29-201ENST00000604817 BIN2Q9UBW5 565 aaPredicted RBP5.73□□□□□ -1.49
IGHV3-29-201ENST00000604817 APBA3O96018 575 aa5.72□□□□□ -1.49
IGHV3-29-201ENST00000604817 ITGB7P26010 798 aa5.72□□□□□ -1.49
IGHV3-29-201ENST00000604817 PCBP4P57723 403 aaKnown RBP5.72□□□□□ -1.49
IGHV3-29-201ENST00000604817 SF3A1Q15459 793 aaKnown RBP5.72□□□□□ -1.49
IGHV3-29-201ENST00000604817 GAS2L2Q8NHY3 880 aa5.72□□□□□ -1.49
IGHV3-29-201ENST00000604817 ZIC5Q96T25 663 aa5.72□□□□□ -1.49
IGHV3-29-201ENST00000604817 CXXC1Q9P0U4 656 aaPredicted RBP5.72□□□□□ -1.49
IGHV3-29-201ENST00000604817 PPP1R1BQ9UD71 204 aaPredicted RBP5.72□□□□□ -1.49
IGHV3-29-201ENST00000604817 WIZO95785 1651 aa5.72□□□□□ -1.49
IGHV3-29-201ENST00000604817 A6NJY4 79 aa5.71□□□□□ -1.5
IGHV3-29-201ENST00000604817 SFI1A8K8P3 1242 aa5.71□□□□□ -1.5
IGHV3-29-201ENST00000604817 PTCD1O75127 700 aaKnown RBP5.71□□□□□ -1.5
IGHV3-29-201ENST00000604817 OCLNQ16625 522 aa5.71□□□□□ -1.5
IGHV3-29-201ENST00000604817 GIMAP6Q6P9H5 292 aa5.71□□□□□ -1.5
IGHV3-29-201ENST00000604817 BICDL1Q6ZP65 573 aa5.71□□□□□ -1.5
IGHV3-29-201ENST00000604817 ZNF295-AS1Q8N0V1 137 aa5.71□□□□□ -1.5
IGHV3-29-201ENST00000604817 COL26A1Q96A83 441 aa5.71□□□□□ -1.5
IGHV3-29-201ENST00000604817 NACC1Q96RE7 527 aa5.71□□□□□ -1.5
IGHV3-29-201ENST00000604817 HINFPQ9BQA5 517 aa5.71□□□□□ -1.5
IGHV3-29-201ENST00000604817 CWC22Q9HCG8 908 aaKnown RBP5.71□□□□□ -1.5
IGHV3-29-201ENST00000604817 CABP1Q9NZU7 370 aa5.71□□□□□ -1.5
IGHV3-29-201ENST00000604817 IQSEC3Q9UPP2 1182 aaPredicted RBP5.71□□□□□ -1.5
IGHV3-29-201ENST00000604817 GPC6Q9Y625 555 aaPredicted RBP5.71□□□□□ -1.5
IGHV3-29-201ENST00000604817 EFSO43281 561 aa5.7□□□□□ -1.5
IGHV3-29-201ENST00000604817 FOXO3O43524 673 aa5.7□□□□□ -1.5
IGHV3-29-201ENST00000604817 SIN3BO75182 1162 aa5.7□□□□□ -1.5
IGHV3-29-201ENST00000604817 NCLP19338 710 aaKnown RBP5.7□□□□□ -1.5
IGHV3-29-201ENST00000604817 WEE1P30291 646 aa5.7□□□□□ -1.5
IGHV3-29-201ENST00000604817 ANKRD13AQ8IZ07 590 aa5.7□□□□□ -1.5
IGHV3-29-201ENST00000604817 EGFL7Q9UHF1 273 aa5.7□□□□□ -1.5
IGHV3-29-201ENST00000604817 SERTAD1Q9UHV2 236 aa5.7□□□□□ -1.5
IGHV3-29-201ENST00000604817 HCN2Q9UL51 889 aa5.7□□□□□ -1.5
IGHV3-29-201ENST00000604817 CHD1O14646 1710 aa5.7□□□□□ -1.5
IGHV3-29-201ENST00000604817 ABCC8Q09428 1581 aa5.69□□□□□ -1.5
IGHV3-29-201ENST00000604817 SCO2A0A1W2PP80 73 aa5.69□□□□□ -1.5
IGHV3-29-201ENST00000604817 ADARB2-AS1A8MUL3 147 aa5.69□□□□□ -1.5
IGHV3-29-201ENST00000604817 TMEM229AB2RXF0 380 aa5.69□□□□□ -1.5
IGHV3-29-201ENST00000604817 IGFBP4P22692 258 aa5.69□□□□□ -1.5
IGHV3-29-201ENST00000604817 RSPO4Q2I0M5 234 aaPredicted RBP5.69□□□□□ -1.5
IGHV3-29-201ENST00000604817 NKAPLQ5M9Q1 402 aa5.69□□□□□ -1.5
IGHV3-29-201ENST00000604817 SYT9Q86SS6 491 aa5.69□□□□□ -1.5
IGHV3-29-201ENST00000604817 PRDM6Q9NQX0 595 aa5.69□□□□□ -1.5
IGHV3-29-201ENST00000604817 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.69□□□□□ -1.5
IGHV3-29-201ENST00000604817 ZNF358Q9NW07 568 aa5.69□□□□□ -1.5
IGHV3-29-201ENST00000604817 AQRO60306 1485 aaKnown RBP eCLIP5.69□□□□□ -1.5
IGHV3-29-201ENST00000604817 ANKRD62A6NC57 917 aa5.68□□□□□ -1.5
IGHV3-29-201ENST00000604817 PRMT3O60678 531 aa5.68□□□□□ -1.5
IGHV3-29-201ENST00000604817 ERCC5P28715 1186 aaPredicted RBP5.68□□□□□ -1.5
IGHV3-29-201ENST00000604817 NEUROD1Q13562 356 aa5.68□□□□□ -1.5
IGHV3-29-201ENST00000604817 ECM1Q16610 540 aa5.68□□□□□ -1.5
IGHV3-29-201ENST00000604817 TSNAXIP1Q2TAA8 658 aa5.68□□□□□ -1.5
IGHV3-29-201ENST00000604817 DPH6Q7L8W6 267 aa5.68□□□□□ -1.5
IGHV3-29-201ENST00000604817 STAG2Q8N3U4 1231 aa5.68□□□□□ -1.5
IGHV3-29-201ENST00000604817 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.68□□□□□ -1.5
IGHV3-29-201ENST00000604817 TSEN2Q8NCE0 465 aaKnown RBP5.68□□□□□ -1.5
IGHV3-29-201ENST00000604817 ASB16Q96NS5 453 aa5.68□□□□□ -1.5
IGHV3-29-201ENST00000604817 MDFIQ99750 246 aa5.68□□□□□ -1.5
IGHV3-29-201ENST00000604817 HIRIP3Q9BW71 556 aaPredicted RBP5.68□□□□□ -1.5
IGHV3-29-201ENST00000604817 HDLBPQ00341 1268 aaKnown RBP5.67□□□□□ -1.5
IGHV3-29-201ENST00000604817 CHMP7Q8WUX9 453 aaPredicted RBP5.67□□□□□ -1.5
IGHV3-29-201ENST00000604817 POLR3GLQ9BT43 218 aa5.67□□□□□ -1.5
IGHV3-29-201ENST00000604817 KRTAP9-2Q9BYQ4 174 aa5.67□□□□□ -1.5
IGHV3-29-201ENST00000604817 BACH2Q9BYV9 841 aa5.67□□□□□ -1.5
IGHV3-29-201ENST00000604817 NEUROD4Q9HD90 331 aa5.67□□□□□ -1.5
IGHV3-29-201ENST00000604817 STRN4Q9NRL3 753 aa5.67□□□□□ -1.5
IGHV3-29-201ENST00000604817 TOPBP1Q92547 1522 aa5.67□□□□□ -1.5
IGHV3-29-201ENST00000604817 EIF4G3O43432 1585 aaKnown RBP5.67□□□□□ -1.5
IGHV3-29-201ENST00000604817 PRDM2Q13029 1718 aa5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 DYRK3O43781 588 aa5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 ICMTO60725 284 aa5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 EPHA4P54764 986 aa5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 TRIM28Q13263 835 aaKnown RBP5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 SF3B2Q13435 895 aaKnown RBP5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 MRPL58Q14197 206 aaKnown RBP5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 COL19A1Q14993 1142 aa5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 TEAD4Q15561 434 aa5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 LDLRAD1Q5T700 205 aa5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 DHX37Q8IY37 1157 aaKnown RBP5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 TNFRSF25Q93038 417 aa5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 PRIMPOLQ96LW4 560 aa5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 TPSG1Q9NRR2 321 aa5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 CHMP3Q9Y3E7 222 aa5.66□□□□□ -1.5
IGHV3-29-201ENST00000604817 M0R082 166 aa5.65□□□□□ -1.5
IGHV3-29-201ENST00000604817 EML1O00423 815 aa5.65□□□□□ -1.5
IGHV3-29-201ENST00000604817 PSMA6P60900 246 aaKnown RBP5.65□□□□□ -1.5
IGHV3-29-201ENST00000604817 RAD51AP2Q09MP3 1159 aa5.65□□□□□ -1.5
IGHV3-29-201ENST00000604817 ARTNQ5T4W7 220 aa5.65□□□□□ -1.5
IGHV3-29-201ENST00000604817 ZNF662Q6ZS27 426 aa5.65□□□□□ -1.5
IGHV3-29-201ENST00000604817 ZNF417Q8TAU3 575 aa5.65□□□□□ -1.5
IGHV3-29-201ENST00000604817 PIK3R5Q8WYR1 880 aa5.65□□□□□ -1.5
IGHV3-29-201ENST00000604817 VTI1AQ96AJ9 217 aa5.65□□□□□ -1.5
IGHV3-29-201ENST00000604817 ZNF587Q96SQ5 575 aaPredicted RBP5.65□□□□□ -1.5
IGHV3-29-201ENST00000604817 ZFP64Q9NPA5 681 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms