RNA–Protein interactions for RNA: ENST00000590638.5

NEDD4L-230, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-230ENST00000590638 IFT43Q96FT9 208 aa11.26□□□□□ -0.61
NEDD4L-230ENST00000590638 TIMMDC1Q9NPL8 285 aa11.26□□□□□ -0.61
NEDD4L-230ENST00000590638 CLSPNQ9HAW4 1339 aa11.26□□□□□ -0.61
NEDD4L-230ENST00000590638 KIF13AQ9H1H9 1805 aa11.25□□□□□ -0.61
NEDD4L-230ENST00000590638 ADGRL2O95490 1459 aa11.25□□□□□ -0.61
NEDD4L-230ENST00000590638 CCDC141Q6ZP82 1450 aa11.25□□□□□ -0.61
NEDD4L-230ENST00000590638 RHOQP17081 205 aa11.25□□□□□ -0.61
NEDD4L-230ENST00000590638 ZFP42Q96MM3 310 aa11.25□□□□□ -0.61
NEDD4L-230ENST00000590638 RRP7BPQ9NSQ0 103 aa11.25□□□□□ -0.61
NEDD4L-230ENST00000590638 ANKRD30AQ9BXX3 1397 aa11.25□□□□□ -0.61
NEDD4L-230ENST00000590638 SYCP2Q9BX26 1530 aa11.25□□□□□ -0.61
NEDD4L-230ENST00000590638 ARSJQ5FYB0 599 aaPredicted RBP11.24□□□□□ -0.61
NEDD4L-230ENST00000590638 WDR44Q5JSH3 913 aa11.24□□□□□ -0.61
NEDD4L-230ENST00000590638 DHX57Q6P158 1386 aaKnown RBP11.24□□□□□ -0.61
NEDD4L-230ENST00000590638 NCOA1Q15788 1441 aa11.24□□□□□ -0.61
NEDD4L-230ENST00000590638 CD109Q6YHK3 1445 aa11.24□□□□□ -0.61
NEDD4L-230ENST00000590638 FANCAO15360 1455 aa11.24□□□□□ -0.61
NEDD4L-230ENST00000590638 ABCC1P33527 1531 aa11.24□□□□□ -0.61
NEDD4L-230ENST00000590638 CFAP74Q9C0B2 1584 aa11.24□□□□□ -0.61
NEDD4L-230ENST00000590638 A0A1B0GTH6 734 aa11.23□□□□□ -0.61
NEDD4L-230ENST00000590638 ANKRD33BA6NCL7 494 aa11.23□□□□□ -0.61
NEDD4L-230ENST00000590638 RBM25P49756 843 aaKnown RBP11.23□□□□□ -0.61
NEDD4L-230ENST00000590638 TRIM46Q7Z4K8 759 aa11.23□□□□□ -0.61
NEDD4L-230ENST00000590638 SOS2Q07890 1332 aaPredicted RBP11.23□□□□□ -0.61
NEDD4L-230ENST00000590638 C9orf84Q5VXU9 1444 aa11.23□□□□□ -0.61
NEDD4L-230ENST00000590638 GLI2P10070 1586 aa11.23□□□□□ -0.61
NEDD4L-230ENST00000590638 MAST1Q9Y2H9 1570 aa11.23□□□□□ -0.61
NEDD4L-230ENST00000590638 ECM1Q16610 540 aa11.22□□□□□ -0.61
NEDD4L-230ENST00000590638 DNAJC14Q6Y2X3 702 aaPredicted RBP11.22□□□□□ -0.61
NEDD4L-230ENST00000590638 TTC16Q8NEE8 873 aa11.22□□□□□ -0.61
NEDD4L-230ENST00000590638 ANKIB1Q9P2G1 1089 aa11.22□□□□□ -0.61
NEDD4L-230ENST00000590638 AMOTL2Q9Y2J4 779 aa11.22□□□□□ -0.61
NEDD4L-230ENST00000590638 GPC6Q9Y625 555 aaPredicted RBP11.22□□□□□ -0.61
NEDD4L-230ENST00000590638 GJA3Q9Y6H8 435 aa11.22□□□□□ -0.61
NEDD4L-230ENST00000590638 MAN1A2O60476 641 aa11.21□□□□□ -0.61
NEDD4L-230ENST00000590638 PCSK2P16519 638 aa11.21□□□□□ -0.61
NEDD4L-230ENST00000590638 ASB16Q96NS5 453 aa11.21□□□□□ -0.61
NEDD4L-230ENST00000590638 FAM13BQ9NYF5 915 aa11.21□□□□□ -0.61
NEDD4L-230ENST00000590638 MAP3K4Q9Y6R4 1608 aa11.2□□□□□ -0.62
NEDD4L-230ENST00000590638 ARHGEF12Q9NZN5 1544 aa11.2□□□□□ -0.62
NEDD4L-230ENST00000590638 ZAP70P43403 619 aa11.2□□□□□ -0.62
NEDD4L-230ENST00000590638 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.2□□□□□ -0.629e-7■■□□□ 13.1
NEDD4L-230ENST00000590638 CRIPAKQ8N1N5 446 aa11.2□□□□□ -0.62
NEDD4L-230ENST00000590638 PGBD3Q8N328 593 aa11.2□□□□□ -0.62
NEDD4L-230ENST00000590638 MSX1P28360 303 aa11.19□□□□□ -0.62
NEDD4L-230ENST00000590638 ATCAYQ86WG3 371 aa11.19□□□□□ -0.62
NEDD4L-230ENST00000590638 TREML1Q86YW5 311 aa11.19□□□□□ -0.62
NEDD4L-230ENST00000590638 ETFBKMTQ8IXQ9 262 aa11.19□□□□□ -0.62
NEDD4L-230ENST00000590638 CITED4Q96RK1 184 aa11.19□□□□□ -0.62
NEDD4L-230ENST00000590638 ADGRL1O94910 1474 aa11.19□□□□□ -0.62
NEDD4L-230ENST00000590638 ZBTB39O15060 712 aa11.18□□□□□ -0.62
NEDD4L-230ENST00000590638 DNM1Q05193 864 aaKnown RBP11.18□□□□□ -0.62
NEDD4L-230ENST00000590638 SUSD3Q96L08 255 aa11.18□□□□□ -0.62
NEDD4L-230ENST00000590638 GAS2L1Q99501 681 aaPredicted RBP11.18□□□□□ -0.62
NEDD4L-230ENST00000590638 BCL2L13Q9BXK5 485 aa11.18□□□□□ -0.62
NEDD4L-230ENST00000590638 GPAMQ9HCL2 828 aa11.18□□□□□ -0.62
NEDD4L-230ENST00000590638 ATP13A2Q9NQ11 1180 aa11.18□□□□□ -0.62
NEDD4L-230ENST00000590638 CCDC87Q9NVE4 849 aa11.18□□□□□ -0.62
NEDD4L-230ENST00000590638 DIP2BQ9P265 1576 aa11.18□□□□□ -0.62
NEDD4L-230ENST00000590638 NEO1Q92859 1461 aa11.18□□□□□ -0.62
NEDD4L-230ENST00000590638 RTEL1-TNFRSF6BF6WH68 1400 aa11.18□□□□□ -0.62
NEDD4L-230ENST00000590638 SCAPERQ9BY12 1400 aa11.18□□□□□ -0.62
NEDD4L-230ENST00000590638 TRAPPC8Q9Y2L5 1435 aa11.18□□□□□ -0.62
NEDD4L-230ENST00000590638 KDM6BO15054 1643 aa11.17□□□□□ -0.62
NEDD4L-230ENST00000590638 PLXNC1O60486 1568 aa11.17□□□□□ -0.62
NEDD4L-230ENST00000590638 TGFBR3LH3BV60 316 aa11.17□□□□□ -0.62
NEDD4L-230ENST00000590638 ST8SIA5O15466 376 aa11.17□□□□□ -0.62
NEDD4L-230ENST00000590638 FZD6O60353 706 aa11.17□□□□□ -0.62
NEDD4L-230ENST00000590638 PDE3BQ13370 1112 aa11.17□□□□□ -0.62
NEDD4L-230ENST00000590638 RGL4Q8IZJ4 473 aa11.17□□□□□ -0.62
NEDD4L-230ENST00000590638 HSH2DQ96JZ2 352 aa11.17□□□□□ -0.62
NEDD4L-230ENST00000590638 RBCK1Q9BYM8 510 aa11.17□□□□□ -0.62
NEDD4L-230ENST00000590638 DNMT3LQ9UJW3 386 aa11.17□□□□□ -0.62
NEDD4L-230ENST00000590638 ANKRD50Q9ULJ7 1429 aa11.17□□□□□ -0.62
NEDD4L-230ENST00000590638 KIF15Q9NS87 1388 aa11.16□□□□□ -0.62
NEDD4L-230ENST00000590638 MICAL2O94851 1124 aa11.16□□□□□ -0.62
NEDD4L-230ENST00000590638 ATP4AP20648 1035 aa11.16□□□□□ -0.62
NEDD4L-230ENST00000590638 MZF1P28698 734 aaPredicted RBP11.16□□□□□ -0.62
NEDD4L-230ENST00000590638 USP5P45974 858 aa11.16□□□□□ -0.62
NEDD4L-230ENST00000590638 LRRC69Q6ZNQ3 347 aa11.16□□□□□ -0.62
NEDD4L-230ENST00000590638 EDEM1Q92611 657 aa11.16□□□□□ -0.62
NEDD4L-230ENST00000590638 SPAG9O60271 1321 aaKnown RBP11.15□□□□□ -0.62
NEDD4L-230ENST00000590638 FAM26DQ5JW98 314 aa11.15□□□□□ -0.62
NEDD4L-230ENST00000590638 GPR152Q8TDT2 470 aa11.15□□□□□ -0.62
NEDD4L-230ENST00000590638 PIK3R5Q8WYR1 880 aa11.15□□□□□ -0.62
NEDD4L-230ENST00000590638 ZIC5Q96T25 663 aa11.15□□□□□ -0.62
NEDD4L-230ENST00000590638 AAASQ9NRG9 546 aa11.15□□□□□ -0.62
NEDD4L-230ENST00000590638 POLIQ9UNA4 740 aa11.15□□□□□ -0.62
NEDD4L-230ENST00000590638 DYRK1BQ9Y463 629 aa11.15□□□□□ -0.62
NEDD4L-230ENST00000590638 A0A1W2PNR3 127 aa11.14□□□□□ -0.63
NEDD4L-230ENST00000590638 F11P03951 625 aa11.14□□□□□ -0.63
NEDD4L-230ENST00000590638 TMC7Q7Z402 723 aa11.14□□□□□ -0.63
NEDD4L-230ENST00000590638 DMRTB1Q96MA1 342 aa11.14□□□□□ -0.63
NEDD4L-230ENST00000590638 BCL11AQ9H165 835 aa11.14□□□□□ -0.63
NEDD4L-230ENST00000590638 RUBCNLQ9H714 662 aa11.14□□□□□ -0.63
NEDD4L-230ENST00000590638 DUOX2Q9NRD8 1548 aa11.14□□□□□ -0.63
NEDD4L-230ENST00000590638 ZNF518AQ6AHZ1 1483 aa11.13□□□□□ -0.63
NEDD4L-230ENST00000590638 IDH3AP50213 366 aa11.13□□□□□ -0.63
NEDD4L-230ENST00000590638 ZNF326Q5BKZ1 582 aaKnown RBP11.13□□□□□ -0.63
NEDD4L-230ENST00000590638 IER5Q5VY09 327 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms