RNA–Protein interactions for RNA: ENST00000590278.1

LRP3-203, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 3,278 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-203ENST00000590278 HDAC5Q9UQL6 1122 aa17.37■□□□□ 0.37
LRP3-203ENST00000590278 NEXNQ0ZGT2 675 aa17.36■□□□□ 0.37
LRP3-203ENST00000590278 AKAP4Q5JQC9 854 aa17.36■□□□□ 0.37
LRP3-203ENST00000590278 FILIP1Q7Z7B0 1213 aa17.36■□□□□ 0.37
LRP3-203ENST00000590278 SMAP1Q8IYB5 467 aaPredicted RBP17.36■□□□□ 0.37
LRP3-203ENST00000590278 MYD88Q99836 296 aa17.36■□□□□ 0.37
LRP3-203ENST00000590278 FTOQ9C0B1 505 aaKnown RBP eCLIP17.36■□□□□ 0.37
LRP3-203ENST00000590278 ALDH1L1O75891 902 aa17.36■□□□□ 0.37
LRP3-203ENST00000590278 TNNT1P13805 278 aa17.36■□□□□ 0.37
LRP3-203ENST00000590278 TOB2Q14106 344 aaPredicted RBP17.36■□□□□ 0.37
LRP3-203ENST00000590278 Q6ZUG5 572 aa17.36■□□□□ 0.37
LRP3-203ENST00000590278 NPHP3Q7Z494 1330 aa17.36■□□□□ 0.37
LRP3-203ENST00000590278 RNMTO43148 476 aaKnown RBP17.36■□□□□ 0.37
LRP3-203ENST00000590278 DDX46Q7L014 1031 aaKnown RBP17.36■□□□□ 0.37
LRP3-203ENST00000590278 BECN2A8MW95 431 aa17.35■□□□□ 0.37
LRP3-203ENST00000590278 CCT2P78371 535 aaKnown RBP17.35■□□□□ 0.37
LRP3-203ENST00000590278 LINS1Q8NG48 757 aa17.35■□□□□ 0.37
LRP3-203ENST00000590278 TBX22Q9Y458 520 aa17.35■□□□□ 0.37
LRP3-203ENST00000590278 NAA30Q147X3 362 aaPredicted RBP17.35■□□□□ 0.37
LRP3-203ENST00000590278 DDX19AQ9NUU7 478 aaKnown RBP17.35■□□□□ 0.37
LRP3-203ENST00000590278 NEK1Q96PY6 1258 aa17.34■□□□□ 0.37
LRP3-203ENST00000590278 USP42Q9H9J4 1324 aaKnown RBP17.34■□□□□ 0.37
LRP3-203ENST00000590278 HOXB7P09629 217 aa17.34■□□□□ 0.37
LRP3-203ENST00000590278 PRDM4Q9UKN5 801 aa17.34■□□□□ 0.37
LRP3-203ENST00000590278 MTX1Q13505 466 aa17.34■□□□□ 0.37
LRP3-203ENST00000590278 SLFNL1Q499Z3 407 aa17.34■□□□□ 0.37
LRP3-203ENST00000590278 KAZALD1Q96I82 304 aa17.34■□□□□ 0.37
LRP3-203ENST00000590278 PGBD1Q96JS3 809 aa17.34■□□□□ 0.37
LRP3-203ENST00000590278 NEUROD6Q96NK8 337 aa17.34■□□□□ 0.37
LRP3-203ENST00000590278 DIP2BQ9P265 1576 aa17.33■□□□□ 0.37
LRP3-203ENST00000590278 ZNF75DP51815 510 aa17.33■□□□□ 0.37
LRP3-203ENST00000590278 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.33■□□□□ 0.37
LRP3-203ENST00000590278 V9GYY5 206 aaPredicted RBP17.33■□□□□ 0.37
LRP3-203ENST00000590278 FMN2Q9NZ56 1722 aa17.33■□□□□ 0.37
LRP3-203ENST00000590278 ATP5J2-PTCD1G3V325 749 aa17.33■□□□□ 0.36
LRP3-203ENST00000590278 PTCD1O75127 700 aaKnown RBP17.33■□□□□ 0.36
LRP3-203ENST00000590278 ARID5BQ14865 1188 aa17.33■□□□□ 0.36
LRP3-203ENST00000590278 CHST3Q7LGC8 479 aa17.33■□□□□ 0.36
LRP3-203ENST00000590278 CLSTN2Q9H4D0 955 aa17.33■□□□□ 0.36
LRP3-203ENST00000590278 TRMT1Q9NXH9 659 aaKnown RBP17.33■□□□□ 0.36
LRP3-203ENST00000590278 RGPD8O14715 1765 aaPredicted RBP17.33■□□□□ 0.36
LRP3-203ENST00000590278 NPHP1O15259 732 aa17.32■□□□□ 0.36
LRP3-203ENST00000590278 EPHA10Q5JZY3 1008 aa17.32■□□□□ 0.36
LRP3-203ENST00000590278 ZSCAN25Q6NSZ9 544 aa17.32■□□□□ 0.36
LRP3-203ENST00000590278 CEMIPQ8WUJ3 1361 aa17.32■□□□□ 0.36
LRP3-203ENST00000590278 XAGE3Q8WTP9 111 aa17.32■□□□□ 0.36
LRP3-203ENST00000590278 TUBGCP6Q96RT7 1819 aa17.32■□□□□ 0.36
LRP3-203ENST00000590278 GTF2F1P35269 517 aaKnown RBP eCLIP17.32■□□□□ 0.36
LRP3-203ENST00000590278 COPS6Q7L5N1 327 aa17.32■□□□□ 0.36
LRP3-203ENST00000590278 TAF5LO75529 589 aa17.31■□□□□ 0.36
LRP3-203ENST00000590278 TFCP2Q12800 502 aa17.31■□□□□ 0.36
LRP3-203ENST00000590278 UBE3BQ7Z3V4 1068 aa17.31■□□□□ 0.36
LRP3-203ENST00000590278 THEMISQ8N1K5 641 aaPredicted RBP17.31■□□□□ 0.36
LRP3-203ENST00000590278 CCDC112Q8NEF3 446 aa17.31■□□□□ 0.36
LRP3-203ENST00000590278 CACTINQ8WUQ7 758 aaKnown RBP17.31■□□□□ 0.36
LRP3-203ENST00000590278 NALCNQ8IZF0 1738 aa17.31■□□□□ 0.36
LRP3-203ENST00000590278 CCDC144BQ3MJ40 725 aa17.31■□□□□ 0.36
LRP3-203ENST00000590278 CCDC144CPQ8IYA2 1237 aa17.31■□□□□ 0.36
LRP3-203ENST00000590278 ELP1O95163 1332 aa17.3■□□□□ 0.36
LRP3-203ENST00000590278 ME1P48163 572 aa17.3■□□□□ 0.36
LRP3-203ENST00000590278 ANKRD24Q8TF21 1146 aa17.3■□□□□ 0.36
LRP3-203ENST00000590278 NCOA5Q9HCD5 579 aaKnown RBP17.3■□□□□ 0.36
LRP3-203ENST00000590278 IGKV5-2P06315 115 aa17.3■□□□□ 0.36
LRP3-203ENST00000590278 CCDC73Q6ZRK6 1079 aa17.3■□□□□ 0.36
LRP3-203ENST00000590278 CCAR1Q8IX12 1150 aaKnown RBP17.3■□□□□ 0.36
LRP3-203ENST00000590278 FMNL2Q96PY5 1086 aa17.3■□□□□ 0.36
LRP3-203ENST00000590278 DBNDD2Q9BQY9 259 aa17.3■□□□□ 0.36
LRP3-203ENST00000590278 DBNLQ9UJU6 430 aaKnown RBP17.3■□□□□ 0.36
LRP3-203ENST00000590278 USP16Q9Y5T5 823 aa17.3■□□□□ 0.36
LRP3-203ENST00000590278 DIP2AQ14689 1571 aa17.3■□□□□ 0.36
LRP3-203ENST00000590278 PIK3C2AO00443 1686 aa17.29■□□□□ 0.36
LRP3-203ENST00000590278 ZC3H6P61129 1189 aaKnown RBP17.29■□□□□ 0.36
LRP3-203ENST00000590278 APOBRQ0VD83 1088 aa17.29■□□□□ 0.36
LRP3-203ENST00000590278 GTF3C6Q969F1 213 aa17.29■□□□□ 0.36
LRP3-203ENST00000590278 ZRSR1Q15695 479 aaKnown RBP17.29■□□□□ 0.36
LRP3-203ENST00000590278 C11orf57Q6ZUT1 292 aaPredicted RBP17.29■□□□□ 0.36
LRP3-203ENST00000590278 AMOTQ4VCS5 1084 aa17.29■□□□□ 0.36
LRP3-203ENST00000590278 KCNB2Q92953 911 aa17.29■□□□□ 0.36
LRP3-203ENST00000590278 DDX21Q9NR30 783 aaKnown RBP eCLIP17.29■□□□□ 0.36
LRP3-203ENST00000590278 HMG20BQ9P0W2 317 aa17.29■□□□□ 0.36
LRP3-203ENST00000590278 CFAP45Q9UL16 551 aa17.29■□□□□ 0.36
LRP3-203ENST00000590278 KINO60870 393 aaKnown RBP17.28■□□□□ 0.36
LRP3-203ENST00000590278 CYP21A2P08686 494 aa17.28■□□□□ 0.36
LRP3-203ENST00000590278 ZSCAN20P17040 1043 aaPredicted RBP17.28■□□□□ 0.36
LRP3-203ENST00000590278 SCRN1Q12765 414 aa17.28■□□□□ 0.36
LRP3-203ENST00000590278 KRT32Q14532 448 aa17.28■□□□□ 0.36
LRP3-203ENST00000590278 RAB11FIP4Q86YS3 637 aa17.28■□□□□ 0.36
LRP3-203ENST00000590278 TOPAZ1Q8N9V7 1692 aa17.28■□□□□ 0.36
LRP3-203ENST00000590278 NLRP2Q9NX02 1062 aa17.27■□□□□ 0.36
LRP3-203ENST00000590278 GOLIM4O00461 696 aa17.27■□□□□ 0.36
LRP3-203ENST00000590278 SYTL4Q96C24 671 aaPredicted RBP17.27■□□□□ 0.36
LRP3-203ENST00000590278 SDF4Q9BRK5 362 aa17.27■□□□□ 0.36
LRP3-203ENST00000590278 GCP02774 474 aa17.27■□□□□ 0.35
LRP3-203ENST00000590278 NFATC2IPQ8NCF5 419 aa17.27■□□□□ 0.35
LRP3-203ENST00000590278 NEURL1BA8MQ27 555 aa17.26■□□□□ 0.35
LRP3-203ENST00000590278 RESTQ13127 1097 aa17.26■□□□□ 0.35
LRP3-203ENST00000590278 GCKRQ14397 625 aa17.26■□□□□ 0.35
LRP3-203ENST00000590278 SF3A1Q15459 793 aaKnown RBP17.26■□□□□ 0.35
LRP3-203ENST00000590278 KCNH5Q8NCM2 988 aa17.26■□□□□ 0.35
LRP3-203ENST00000590278 CACNA1FO60840 1977 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms