RNA–Protein interactions for RNA: ENST00000590064.1

APBA3-205, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 4,250 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-205ENST00000590064 TMEM87AQ8NBN3 555 aa18.82■□□□□ 0.6
APBA3-205ENST00000590064 EPB41L2O43491 1005 aaKnown RBP18.82■□□□□ 0.6
APBA3-205ENST00000590064 RPS6KB1P23443 525 aa18.82■□□□□ 0.6
APBA3-205ENST00000590064 NCBP1Q09161 790 aaKnown RBP18.82■□□□□ 0.6
APBA3-205ENST00000590064 RAPGEF4Q8WZA2 1011 aa18.82■□□□□ 0.6
APBA3-205ENST00000590064 ZNF710Q8N1W2 664 aa18.81■□□□□ 0.6
APBA3-205ENST00000590064 CCDC102AQ96A19 550 aa18.81■□□□□ 0.6
APBA3-205ENST00000590064 MYD88Q99836 296 aa18.81■□□□□ 0.6
APBA3-205ENST00000590064 CASQ1P31415 396 aa18.81■□□□□ 0.6
APBA3-205ENST00000590064 LMAN1P49257 510 aa18.81■□□□□ 0.6
APBA3-205ENST00000590064 A0A087WWV3 80 aa18.8■□□□□ 0.6
APBA3-205ENST00000590064 A0A1B0GVL5 298 aa18.8■□□□□ 0.6
APBA3-205ENST00000590064 CHST3Q7LGC8 479 aa18.8■□□□□ 0.6
APBA3-205ENST00000590064 NLRP2Q9NX02 1062 aa18.8■□□□□ 0.6
APBA3-205ENST00000590064 VIRMAQ69YN4 1812 aaKnown RBP18.8■□□□□ 0.6
APBA3-205ENST00000590064 HMGB1P09429 215 aaKnown RBP18.8■□□□□ 0.6
APBA3-205ENST00000590064 PPFIBP1Q86W92 1011 aa18.8■□□□□ 0.6
APBA3-205ENST00000590064 TM6SF1Q9BZW5 370 aa18.8■□□□□ 0.6
APBA3-205ENST00000590064 ZSWIM6Q9HCJ5 1215 aa18.8■□□□□ 0.6
APBA3-205ENST00000590064 APOBRQ0VD83 1088 aa18.8■□□□□ 0.6
APBA3-205ENST00000590064 ERCC6LQ2NKX8 1250 aa18.8■□□□□ 0.6
APBA3-205ENST00000590064 PRDM4Q9UKN5 801 aa18.8■□□□□ 0.6
APBA3-205ENST00000590064 QRICH2Q9H0J4 1663 aa18.79■□□□□ 0.6
APBA3-205ENST00000590064 GOLIM4O00461 696 aa18.79■□□□□ 0.6
APBA3-205ENST00000590064 UBASH3AP57075 661 aa18.79■□□□□ 0.6
APBA3-205ENST00000590064 HAND2P61296 217 aa18.79■□□□□ 0.6
APBA3-205ENST00000590064 PTPDC1A2A3K4 754 aa18.79■□□□□ 0.6
APBA3-205ENST00000590064 ANKRD20A12PQ8NF67 263 aa18.79■□□□□ 0.6
APBA3-205ENST00000590064 KCNF1Q9H3M0 494 aa18.79■□□□□ 0.6
APBA3-205ENST00000590064 ERLIN1O75477 346 aa18.78■□□□□ 0.6
APBA3-205ENST00000590064 IPO7O95373 1038 aaKnown RBP18.78■□□□□ 0.6
APBA3-205ENST00000590064 LRRC8AQ8IWT6 810 aa18.78■□□□□ 0.6
APBA3-205ENST00000590064 ORC3Q9UBD5 711 aaPredicted RBP18.78■□□□□ 0.6
APBA3-205ENST00000590064 EIF3JO75822 258 aaKnown RBP18.78■□□□□ 0.6
APBA3-205ENST00000590064 PNPLA6Q8IY17 1366 aa18.78■□□□□ 0.6
APBA3-205ENST00000590064 GOLGA8BA8MQT2 603 aa18.77■□□□□ 0.6
APBA3-205ENST00000590064 GRM8O00222 908 aa18.77■□□□□ 0.6
APBA3-205ENST00000590064 CCDC129Q6ZRS4 1044 aa18.77■□□□□ 0.6
APBA3-205ENST00000590064 KLHDC4Q8TBB5 520 aa18.77■□□□□ 0.6
APBA3-205ENST00000590064 FLT4P35916 1363 aa18.77■□□□□ 0.6
APBA3-205ENST00000590064 CPLX3Q8WVH0 158 aa18.77■□□□□ 0.6
APBA3-205ENST00000590064 FAM160A1Q05DH4 1040 aa18.77■□□□□ 0.6
APBA3-205ENST00000590064 EDC3Q96F86 508 aaKnown RBP18.77■□□□□ 0.59
APBA3-205ENST00000590064 NDUFB9Q9Y6M9 179 aa18.77■□□□□ 0.59
APBA3-205ENST00000590064 MARCKSP29966 332 aaPredicted RBP18.76■□□□□ 0.59
APBA3-205ENST00000590064 ARID5BQ14865 1188 aa18.76■□□□□ 0.59
APBA3-205ENST00000590064 TSPYL1Q9H0U9 437 aa18.76■□□□□ 0.59
APBA3-205ENST00000590064 ARFGAP3Q9NP61 516 aa18.76■□□□□ 0.59
APBA3-205ENST00000590064 FILIP1LQ4L180 1135 aa18.76■□□□□ 0.59
APBA3-205ENST00000590064 PCMTD1Q96MG8 357 aaPredicted RBP18.76■□□□□ 0.59
APBA3-205ENST00000590064 PLCD3Q8N3E9 789 aa18.76■□□□□ 0.59
APBA3-205ENST00000590064 TDRD7Q8NHU6 1098 aaKnown RBP18.76■□□□□ 0.59
APBA3-205ENST00000590064 NCOA5Q9HCD5 579 aaKnown RBP18.76■□□□□ 0.59
APBA3-205ENST00000590064 EFCAB6Q5THR3 1501 aa18.76■□□□□ 0.59
APBA3-205ENST00000590064 TULP4Q9NRJ4 1543 aa18.75■□□□□ 0.59
APBA3-205ENST00000590064 KIF4BQ2VIQ3 1234 aa18.75■□□□□ 0.59
APBA3-205ENST00000590064 JAKMIP3Q5VZ66 844 aa18.75■□□□□ 0.59
APBA3-205ENST00000590064 KLHL10Q6JEL2 608 aa18.75■□□□□ 0.59
APBA3-205ENST00000590064 CCDC12Q8WUD4 166 aaPredicted RBP18.75■□□□□ 0.59
APBA3-205ENST00000590064 ATP10DQ9P241 1426 aa18.75■□□□□ 0.59
APBA3-205ENST00000590064 RRP12Q5JTH9 1297 aaKnown RBP18.75■□□□□ 0.59
APBA3-205ENST00000590064 MCM6Q14566 821 aa18.75■□□□□ 0.59
APBA3-205ENST00000590064 IMMTQ16891 758 aaKnown RBP18.75■□□□□ 0.59
APBA3-205ENST00000590064 CCDC70Q6NSX1 233 aa18.75■□□□□ 0.59
APBA3-205ENST00000590064 UBE3BQ7Z3V4 1068 aa18.75■□□□□ 0.59
APBA3-205ENST00000590064 UTP14AQ9BVJ6 771 aaKnown RBP18.75■□□□□ 0.59
APBA3-205ENST00000590064 A0A0D9SFI3 127 aa18.74■□□□□ 0.59
APBA3-205ENST00000590064 TTC39AQ5SRH9 613 aa18.74■□□□□ 0.59
APBA3-205ENST00000590064 CCDC85AQ96PX6 553 aaPredicted RBP18.74■□□□□ 0.59
APBA3-205ENST00000590064 KSR2Q6VAB6 950 aa18.74■□□□□ 0.59
APBA3-205ENST00000590064 CNNM3Q8NE01 707 aa18.74■□□□□ 0.59
APBA3-205ENST00000590064 CTNNA3Q9UI47 895 aa18.74■□□□□ 0.59
APBA3-205ENST00000590064 ALDH1L1O75891 902 aa18.74■□□□□ 0.59
APBA3-205ENST00000590064 AXDND1Q5T1B0 1012 aaPredicted RBP18.74■□□□□ 0.59
APBA3-205ENST00000590064 CAGE1Q8TC20 777 aa18.74■□□□□ 0.59
APBA3-205ENST00000590064 CARD6Q9BX69 1037 aa18.74■□□□□ 0.59
APBA3-205ENST00000590064 TRIM34Q9BYJ4 488 aa18.74■□□□□ 0.59
APBA3-205ENST00000590064 IL25Q9H293 177 aa18.74■□□□□ 0.59
APBA3-205ENST00000590064 MAP3K5Q99683 1374 aa18.74■□□□□ 0.59
APBA3-205ENST00000590064 IFIT1P09914 478 aaKnown RBP18.74■□□□□ 0.59
APBA3-205ENST00000590064 TXLNBQ8N3L3 684 aa18.74■□□□□ 0.59
APBA3-205ENST00000590064 SYKP43405 635 aa18.73■□□□□ 0.59
APBA3-205ENST00000590064 ESCO1Q5FWF5 840 aa18.73■□□□□ 0.59
APBA3-205ENST00000590064 CCDC158Q5M9N0 1113 aa18.73■□□□□ 0.59
APBA3-205ENST00000590064 BICC1Q9H694 974 aaKnown RBP18.73■□□□□ 0.59
APBA3-205ENST00000590064 EVCP57679 992 aa18.73■□□□□ 0.59
APBA3-205ENST00000590064 MCMDC2Q4G0Z9 681 aa18.73■□□□□ 0.59
APBA3-205ENST00000590064 OTUD7BQ6GQQ9 843 aa18.73■□□□□ 0.59
APBA3-205ENST00000590064 PI4K2BQ8TCG2 481 aa18.73■□□□□ 0.59
APBA3-205ENST00000590064 SMARCE1Q969G3 411 aa18.73■□□□□ 0.59
APBA3-205ENST00000590064 SNRKQ9NRH2 765 aa18.73■□□□□ 0.59
APBA3-205ENST00000590064 ATP5J2-PTCD1G3V325 749 aa18.73■□□□□ 0.59
APBA3-205ENST00000590064 PTCD1O75127 700 aaKnown RBP18.73■□□□□ 0.59
APBA3-205ENST00000590064 C11orf57Q6ZUT1 292 aaPredicted RBP18.73■□□□□ 0.59
APBA3-205ENST00000590064 MYOM1P52179 1685 aa18.72■□□□□ 0.59
APBA3-205ENST00000590064 SPTLC2O15270 562 aa18.72■□□□□ 0.59
APBA3-205ENST00000590064 TTC14Q96N46 770 aa18.72■□□□□ 0.59
APBA3-205ENST00000590064 GLI2P10070 1586 aa18.72■□□□□ 0.59
APBA3-205ENST00000590064 TULP1O00294 542 aaPredicted RBP18.72■□□□□ 0.59
APBA3-205ENST00000590064 KCNG4Q8TDN1 519 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms