RNA–Protein interactions for RNA: ENST00000587483.5

RUNDC3A-203, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 3,686 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-203ENST00000587483 PRIMPOLQ96LW4 560 aa13.18□□□□□ -0.3
RUNDC3A-203ENST00000587483 SEC62Q99442 399 aaKnown RBP13.18□□□□□ -0.3
RUNDC3A-203ENST00000587483 PLEKHO1Q53GL0 409 aaPredicted RBP13.18□□□□□ -0.3
RUNDC3A-203ENST00000587483 ISM2Q6H9L7 571 aa13.18□□□□□ -0.3
RUNDC3A-203ENST00000587483 ZBTB9Q96C00 473 aa13.18□□□□□ -0.3
RUNDC3A-203ENST00000587483 EAF2Q96CJ1 260 aaPredicted RBP13.18□□□□□ -0.3
RUNDC3A-203ENST00000587483 KCNF1Q9H3M0 494 aa13.18□□□□□ -0.3
RUNDC3A-203ENST00000587483 MARF1Q9Y4F3 1742 aaKnown RBP13.18□□□□□ -0.3
RUNDC3A-203ENST00000587483 CEMIPQ8WUJ3 1361 aa13.17□□□□□ -0.3
RUNDC3A-203ENST00000587483 A0A0D9SFI3 127 aa13.17□□□□□ -0.3
RUNDC3A-203ENST00000587483 TTC6Q86TZ1 520 aa13.17□□□□□ -0.3
RUNDC3A-203ENST00000587483 ZNF710Q8N1W2 664 aa13.17□□□□□ -0.3
RUNDC3A-203ENST00000587483 ZSCAN31Q96LW9 406 aaPredicted RBP13.17□□□□□ -0.3
RUNDC3A-203ENST00000587483 SH2B1Q9NRF2 756 aaPredicted RBP13.17□□□□□ -0.3
RUNDC3A-203ENST00000587483 DBF4Q9UBU7 674 aaPredicted RBP13.17□□□□□ -0.3
RUNDC3A-203ENST00000587483 CCDC171Q6TFL3 1326 aa13.17□□□□□ -0.3
RUNDC3A-203ENST00000587483 SPTLC3Q9NUV7 552 aa13.17□□□□□ -0.3
RUNDC3A-203ENST00000587483 PSMA5P28066 241 aa13.17□□□□□ -0.3
RUNDC3A-203ENST00000587483 HMGN5P82970 282 aaKnown RBP13.17□□□□□ -0.3
RUNDC3A-203ENST00000587483 NECTIN1Q15223 517 aa13.17□□□□□ -0.3
RUNDC3A-203ENST00000587483 SF3A1Q15459 793 aaKnown RBP13.17□□□□□ -0.3
RUNDC3A-203ENST00000587483 SUCLG2Q96I99 432 aa13.17□□□□□ -0.3
RUNDC3A-203ENST00000587483 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.17□□□□□ -0.3
RUNDC3A-203ENST00000587483 DDX58O95786 925 aaKnown RBP13.16□□□□□ -0.3
RUNDC3A-203ENST00000587483 GORABQ5T7V8 394 aa13.16□□□□□ -0.3
RUNDC3A-203ENST00000587483 BRF1Q92994 677 aa13.16□□□□□ -0.3
RUNDC3A-203ENST00000587483 PHF8Q9UPP1 1060 aa13.16□□□□□ -0.3
RUNDC3A-203ENST00000587483 TYRO3Q06418 890 aa13.16□□□□□ -0.3
RUNDC3A-203ENST00000587483 UBE3BQ7Z3V4 1068 aa13.16□□□□□ -0.3
RUNDC3A-203ENST00000587483 EVI5LQ96CN4 794 aa13.16□□□□□ -0.3
RUNDC3A-203ENST00000587483 TM6SF1Q9BZW5 370 aa13.16□□□□□ -0.3
RUNDC3A-203ENST00000587483 FTOQ9C0B1 505 aaKnown RBP eCLIP13.15□□□□□ -0.3
RUNDC3A-203ENST00000587483 ZNF165P49910 485 aa13.15□□□□□ -0.3
RUNDC3A-203ENST00000587483 KIAA1524Q8TCG1 905 aa13.15□□□□□ -0.3
RUNDC3A-203ENST00000587483 SNRKQ9NRH2 765 aa13.15□□□□□ -0.3
RUNDC3A-203ENST00000587483 SLC27A2O14975 620 aa13.15□□□□□ -0.31
RUNDC3A-203ENST00000587483 ME1P48163 572 aa13.15□□□□□ -0.31
RUNDC3A-203ENST00000587483 COPS6Q7L5N1 327 aa13.15□□□□□ -0.31
RUNDC3A-203ENST00000587483 PDCL2Q8N4E4 241 aa13.15□□□□□ -0.31
RUNDC3A-203ENST00000587483 SDF4Q9BRK5 362 aa13.15□□□□□ -0.31
RUNDC3A-203ENST00000587483 CCDC94Q9BW85 323 aaPredicted RBP13.15□□□□□ -0.31
RUNDC3A-203ENST00000587483 BIN1O00499 593 aa13.14□□□□□ -0.31
RUNDC3A-203ENST00000587483 RIOK3O14730 519 aaKnown RBP13.14□□□□□ -0.31
RUNDC3A-203ENST00000587483 MTX1Q13505 466 aa13.14□□□□□ -0.31
RUNDC3A-203ENST00000587483 HSP90AB3PQ58FF7 597 aa13.14□□□□□ -0.31
RUNDC3A-203ENST00000587483 ZNF589Q86UQ0 364 aaPredicted RBP13.14□□□□□ -0.31
RUNDC3A-203ENST00000587483 KCNB2Q92953 911 aa13.14□□□□□ -0.31
RUNDC3A-203ENST00000587483 GRM8O00222 908 aa13.14□□□□□ -0.31
RUNDC3A-203ENST00000587483 HAND2P61296 217 aa13.14□□□□□ -0.31
RUNDC3A-203ENST00000587483 XAGE3Q8WTP9 111 aa13.14□□□□□ -0.31
RUNDC3A-203ENST00000587483 LTN1O94822 1766 aa13.14□□□□□ -0.31
RUNDC3A-203ENST00000587483 KDM3BQ7LBC6 1761 aa13.14□□□□□ -0.31
RUNDC3A-203ENST00000587483 HOXB7P09629 217 aa13.14□□□□□ -0.31
RUNDC3A-203ENST00000587483 NCOA5Q9HCD5 579 aaKnown RBP13.14□□□□□ -0.31
RUNDC3A-203ENST00000587483 GTF2F1P35269 517 aaKnown RBP eCLIP13.13□□□□□ -0.31
RUNDC3A-203ENST00000587483 NAA30Q147X3 362 aaPredicted RBP13.13□□□□□ -0.31
RUNDC3A-203ENST00000587483 Q6ZUG5 572 aa13.13□□□□□ -0.31
RUNDC3A-203ENST00000587483 TBX22Q9Y458 520 aa13.13□□□□□ -0.31
RUNDC3A-203ENST00000587483 PDCP20941 246 aa13.13□□□□□ -0.31
RUNDC3A-203ENST00000587483 U2AF2P26368 475 aaKnown RBP eCLIP13.13□□□□□ -0.31
RUNDC3A-203ENST00000587483 FKBP4Q02790 459 aaKnown RBP eCLIP13.13□□□□□ -0.31
RUNDC3A-203ENST00000587483 OTUD7BQ6GQQ9 843 aa13.13□□□□□ -0.31
RUNDC3A-203ENST00000587483 TTC5Q8N0Z6 440 aa13.13□□□□□ -0.31
RUNDC3A-203ENST00000587483 FAM200AQ8TCP9 573 aa13.13□□□□□ -0.31
RUNDC3A-203ENST00000587483 MAP4K1Q92918 833 aa13.13□□□□□ -0.31
RUNDC3A-203ENST00000587483 CLIP2Q9UDT6 1046 aa13.13□□□□□ -0.31
RUNDC3A-203ENST00000587483 MRVI1Q9Y6F6 885 aa13.13□□□□□ -0.31
RUNDC3A-203ENST00000587483 NR1I2O75469 434 aa13.12□□□□□ -0.31
RUNDC3A-203ENST00000587483 SASH1O94885 1247 aa13.12□□□□□ -0.31
RUNDC3A-203ENST00000587483 WASHC4Q2M389 1173 aa13.12□□□□□ -0.31
RUNDC3A-203ENST00000587483 KSR2Q6VAB6 950 aa13.12□□□□□ -0.31
RUNDC3A-203ENST00000587483 ERC1Q8IUD2 1116 aa13.12□□□□□ -0.31
RUNDC3A-203ENST00000587483 NFATC2IPQ8NCF5 419 aa13.12□□□□□ -0.31
RUNDC3A-203ENST00000587483 RAPGEF4Q8WZA2 1011 aa13.12□□□□□ -0.31
RUNDC3A-203ENST00000587483 MED1Q15648 1581 aaPredicted RBP13.12□□□□□ -0.31
RUNDC3A-203ENST00000587483 GOLIM4O00461 696 aa13.12□□□□□ -0.31
RUNDC3A-203ENST00000587483 TNNT1P13805 278 aa13.12□□□□□ -0.31
RUNDC3A-203ENST00000587483 BCL2L12Q9HB09 334 aa13.12□□□□□ -0.31
RUNDC3A-203ENST00000587483 PRDM4Q9UKN5 801 aa13.12□□□□□ -0.31
RUNDC3A-203ENST00000587483 POLR3DP05423 398 aaPredicted RBP13.12□□□□□ -0.31
RUNDC3A-203ENST00000587483 CBX8Q9HC52 389 aa13.12□□□□□ -0.31
RUNDC3A-203ENST00000587483 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
RUNDC3A-203ENST00000587483 TFCP2Q12800 502 aa13.11□□□□□ -0.31
RUNDC3A-203ENST00000587483 ORAI2Q96SN7 254 aa13.11□□□□□ -0.31
RUNDC3A-203ENST00000587483 CCDC73Q6ZRK6 1079 aa13.11□□□□□ -0.31
RUNDC3A-203ENST00000587483 IP6K1Q92551 441 aa13.11□□□□□ -0.31
RUNDC3A-203ENST00000587483 TIMM10P62072 90 aa13.11□□□□□ -0.31
RUNDC3A-203ENST00000587483 APOBRQ0VD83 1088 aa13.11□□□□□ -0.31
RUNDC3A-203ENST00000587483 GNL2Q13823 731 aaKnown RBP13.11□□□□□ -0.31
RUNDC3A-203ENST00000587483 ARID5BQ14865 1188 aa13.11□□□□□ -0.31
RUNDC3A-203ENST00000587483 CABLES1Q8TDN4 633 aa13.11□□□□□ -0.31
RUNDC3A-203ENST00000587483 NEK1Q96PY6 1258 aa13.11□□□□□ -0.31
RUNDC3A-203ENST00000587483 A0A087WZG4 1122 aa13.1□□□□□ -0.31
RUNDC3A-203ENST00000587483 ALDH1L1O75891 902 aa13.1□□□□□ -0.31
RUNDC3A-203ENST00000587483 CHRNA2Q15822 529 aa13.1□□□□□ -0.31
RUNDC3A-203ENST00000587483 HSP90AA4PQ58FG1 418 aa13.1□□□□□ -0.31
RUNDC3A-203ENST00000587483 ZNF771Q7L3S4 317 aaPredicted RBP13.1□□□□□ -0.31
RUNDC3A-203ENST00000587483 SMAP1Q8IYB5 467 aaPredicted RBP13.1□□□□□ -0.31
RUNDC3A-203ENST00000587483 FAM177A1Q8N128 213 aaPredicted RBP13.1□□□□□ -0.31
RUNDC3A-203ENST00000587483 ANKRD24Q8TF21 1146 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms