RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 TTLL7Q6ZT98 887 aa10.08□□□□□ -0.8
RPAIN-215ENST00000575112 NCOA5Q9HCD5 579 aaKnown RBP10.08□□□□□ -0.8
RPAIN-215ENST00000575112 DIP2CQ9Y2E4 1556 aa10.08□□□□□ -0.8
RPAIN-215ENST00000575112 A0A0D9SFI3 127 aa10.08□□□□□ -0.8
RPAIN-215ENST00000575112 GTF2F1P35269 517 aaKnown RBP eCLIP10.08□□□□□ -0.8
RPAIN-215ENST00000575112 NCBP1Q09161 790 aaKnown RBP10.08□□□□□ -0.8
RPAIN-215ENST00000575112 CDC37L1Q7L3B6 337 aa10.08□□□□□ -0.8
RPAIN-215ENST00000575112 TTC6Q86TZ1 520 aa10.08□□□□□ -0.8
RPAIN-215ENST00000575112 TUBGCP6Q96RT7 1819 aa10.08□□□□□ -0.8
RPAIN-215ENST00000575112 ARAP3Q8WWN8 1544 aa10.08□□□□□ -0.8
RPAIN-215ENST00000575112 JAK2O60674 1132 aa10.08□□□□□ -0.8
RPAIN-215ENST00000575112 ACSBG1Q96GR2 724 aa10.08□□□□□ -0.8
RPAIN-215ENST00000575112 TBC1D2BQ9UPU7 963 aa10.08□□□□□ -0.8
RPAIN-215ENST00000575112 AMOTQ4VCS5 1084 aa10.07□□□□□ -0.8
RPAIN-215ENST00000575112 CCDC24Q8N4L8 307 aa10.07□□□□□ -0.8
RPAIN-215ENST00000575112 PI4K2BQ8TCG2 481 aa10.07□□□□□ -0.8
RPAIN-215ENST00000575112 PRIMPOLQ96LW4 560 aa10.07□□□□□ -0.8
RPAIN-215ENST00000575112 MTMR6Q9Y217 621 aa10.07□□□□□ -0.8
RPAIN-215ENST00000575112 CPLX1O14810 134 aa10.07□□□□□ -0.8
RPAIN-215ENST00000575112 SGSM2O43147 1006 aa10.07□□□□□ -0.8
RPAIN-215ENST00000575112 POLR3DP05423 398 aaPredicted RBP10.07□□□□□ -0.8
RPAIN-215ENST00000575112 UBE2HP62256 183 aa10.07□□□□□ -0.8
RPAIN-215ENST00000575112 ME3Q16798 604 aa10.07□□□□□ -0.8
RPAIN-215ENST00000575112 CCDC144BQ3MJ40 725 aa10.07□□□□□ -0.8
RPAIN-215ENST00000575112 SYNE4Q8N205 404 aa10.07□□□□□ -0.8
RPAIN-215ENST00000575112 LSG1Q9H089 658 aaKnown RBP10.07□□□□□ -0.8
RPAIN-215ENST00000575112 CNNM1Q9NRU3 951 aa10.07□□□□□ -0.8
RPAIN-215ENST00000575112 HYPKQ9NX55 129 aa10.07□□□□□ -0.8
RPAIN-215ENST00000575112 CRB1P82279 1406 aa10.07□□□□□ -0.8
RPAIN-215ENST00000575112 SNAP23O00161 211 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 KCNQ4P56696 695 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 HSP90AA4PQ58FG1 418 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 CREB3L3Q68CJ9 461 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 TRIM5Q9C035 493 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 AATKQ6ZMQ8 1374 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 VGLL3A8MV65 326 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 BIN1O00499 593 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 CCDC57Q2TAC2 916 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 IFNL2Q8IZJ0 200 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 LINS1Q8NG48 757 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 SSH3Q8TE77 659 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 SPATA32Q96LK8 384 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 HDAC5Q9UQL6 1122 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 REREQ9P2R6 1566 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 CPSF1Q10570 1443 aaKnown RBP10.06□□□□□ -0.8
RPAIN-215ENST00000575112 MCM2P49736 904 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 NFXL1Q6ZNB6 911 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 ZNF589Q86UQ0 364 aaPredicted RBP10.06□□□□□ -0.8
RPAIN-215ENST00000575112 CEP126Q9P2H0 1117 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 CGNQ9P2M7 1197 aaKnown RBP10.06□□□□□ -0.8
RPAIN-215ENST00000575112 MRVI1Q9Y6F6 885 aa10.06□□□□□ -0.8
RPAIN-215ENST00000575112 IFIT1P09914 478 aaKnown RBP10.05□□□□□ -0.8
RPAIN-215ENST00000575112 PIP4K2BP78356 416 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 TTC39AQ5SRH9 613 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 TTLL5Q6EMB2 1281 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 MTERF4Q7Z6M4 381 aaKnown RBP10.05□□□□□ -0.8
RPAIN-215ENST00000575112 JAG2Q9Y219 1238 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 ATP7BP35670 1465 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 CDK12Q9NYV4 1490 aaPredicted RBP10.05□□□□□ -0.8
RPAIN-215ENST00000575112 BECN2A8MW95 431 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 PHF14O94880 888 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 ME1P48163 572 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 APOBRQ0VD83 1088 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 ANO6Q4KMQ2 910 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 PI16Q6UXB8 463 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 FILIP1Q7Z7B0 1213 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 ERC1Q8IUD2 1116 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 SDF4Q9BRK5 362 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 PUS3Q9BZE2 481 aaKnown RBP10.05□□□□□ -0.8
RPAIN-215ENST00000575112 FTOQ9C0B1 505 aaKnown RBP eCLIP10.05□□□□□ -0.8
RPAIN-215ENST00000575112 DACT1Q9NYF0 836 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 TPCN1Q9ULQ1 816 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 ATP6V1DQ9Y5K8 247 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 SNRPA1P09661 255 aaKnown RBP10.05□□□□□ -0.8
RPAIN-215ENST00000575112 ANKRD7Q92527 254 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 CHMP4AQ9BY43 222 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 KIF24Q5T7B8 1368 aa10.05□□□□□ -0.8
RPAIN-215ENST00000575112 CACTINQ8WUQ7 758 aaKnown RBP10.04□□□□□ -0.8
RPAIN-215ENST00000575112 EVI5LQ96CN4 794 aa10.04□□□□□ -0.8
RPAIN-215ENST00000575112 TMEM131LA2VDJ0 1609 aa10.04□□□□□ -0.8
RPAIN-215ENST00000575112 RAD50Q92878 1312 aa10.04□□□□□ -0.8
RPAIN-215ENST00000575112 PTPRUQ92729 1446 aa10.04□□□□□ -0.8
RPAIN-215ENST00000575112 CLTCQ00610 1675 aaKnown RBP10.04□□□□□ -0.8
RPAIN-215ENST00000575112 SASH1O94885 1247 aa10.04□□□□□ -0.8
RPAIN-215ENST00000575112 PSMA5P28066 241 aa10.04□□□□□ -0.8
RPAIN-215ENST00000575112 LRRC24Q50LG9 513 aa10.04□□□□□ -0.8
RPAIN-215ENST00000575112 Q6ZUG5 572 aa10.04□□□□□ -0.8
RPAIN-215ENST00000575112 DNAJC25Q9H1X3 360 aa10.04□□□□□ -0.8
RPAIN-215ENST00000575112 CBX8Q9HC52 389 aa10.04□□□□□ -0.8
RPAIN-215ENST00000575112 DDX21Q9NR30 783 aaKnown RBP eCLIP10.04□□□□□ -0.8
RPAIN-215ENST00000575112 NR1I2O75469 434 aa10.04□□□□□ -0.8
RPAIN-215ENST00000575112 ANAPC15P60006 121 aa10.04□□□□□ -0.8
RPAIN-215ENST00000575112 TMEM87AQ8NBN3 555 aa10.04□□□□□ -0.8
RPAIN-215ENST00000575112 TNMDQ9H2S6 317 aa10.04□□□□□ -0.8
RPAIN-215ENST00000575112 GPHNQ9NQX3 736 aaPredicted RBP10.04□□□□□ -0.8
RPAIN-215ENST00000575112 TRMT1Q9NXH9 659 aaKnown RBP10.04□□□□□ -0.8
RPAIN-215ENST00000575112 PREX1Q8TCU6 1659 aa10.04□□□□□ -0.8
RPAIN-215ENST00000575112 TYRO3Q06418 890 aa10.03□□□□□ -0.8
RPAIN-215ENST00000575112 UVSSAQ2YD98 709 aa10.03□□□□□ -0.8
RPAIN-215ENST00000575112 UTP14CQ5TAP6 766 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms