RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CREBRFQ8IUR6 639 aa6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 MYO1HQ8N1T3 1032 aa6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 CCDC89Q8N998 374 aa6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 SNRNP27Q8WVK2 155 aaKnown RBP6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 HLA-CQ95604 372 aa6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 E2F7Q96AV8 911 aa6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 DNAJC7Q99615 494 aa6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 IFT122Q9HBG6 1241 aa6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 SPG7Q9UQ90 795 aa6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 USP31Q70CQ4 1352 aa6.28□□□□□ -1.4
TOPBP1-210ENST00000572787 KCNQ2O43526 872 aa6.27□□□□□ -1.41
TOPBP1-210ENST00000572787 FZD6O60353 706 aa6.27□□□□□ -1.41
TOPBP1-210ENST00000572787 ETFBP38117 255 aa6.27□□□□□ -1.41
TOPBP1-210ENST00000572787 KSR2Q6VAB6 950 aa6.27□□□□□ -1.41
TOPBP1-210ENST00000572787 SMAP1Q8IYB5 467 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-210ENST00000572787 STK11IPQ8N1F8 1099 aa6.27□□□□□ -1.41
TOPBP1-210ENST00000572787 SYNPOQ8N3V7 929 aa6.27□□□□□ -1.41
TOPBP1-210ENST00000572787 NIF3L1Q9GZT8 377 aa6.27□□□□□ -1.41
TOPBP1-210ENST00000572787 PPCSQ9HAB8 311 aa6.27□□□□□ -1.41
TOPBP1-210ENST00000572787 NAP1L2Q9ULW6 460 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-210ENST00000572787 NOL7Q9UMY1 257 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-210ENST00000572787 PDZRN3Q9UPQ7 1066 aa6.27□□□□□ -1.41
TOPBP1-210ENST00000572787 PLAAQ9Y263 795 aa6.27□□□□□ -1.41
TOPBP1-210ENST00000572787 MRPS23Q9Y3D9 190 aaKnown RBP6.27□□□□□ -1.41
TOPBP1-210ENST00000572787 V9GY48 417 aaPredicted RBP6.27□□□□□ -1.41
TOPBP1-210ENST00000572787 PSDA5PKW4 1024 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-210ENST00000572787 CCDC85CA6NKD9 419 aa6.26□□□□□ -1.41
TOPBP1-210ENST00000572787 M0R2N6 131 aa6.26□□□□□ -1.41
TOPBP1-210ENST00000572787 TK2O00142 265 aa6.26□□□□□ -1.41
TOPBP1-210ENST00000572787 SCGB1D2O95969 90 aa6.26□□□□□ -1.41
TOPBP1-210ENST00000572787 EIF1AXP47813 144 aaKnown RBP6.26□□□□□ -1.41
TOPBP1-210ENST00000572787 NASPP49321 788 aaPredicted RBP6.26□□□□□ -1.41
TOPBP1-210ENST00000572787 TCEA2Q15560 299 aa6.26□□□□□ -1.41
TOPBP1-210ENST00000572787 ALFQ53S48 1182 aa6.26□□□□□ -1.41
TOPBP1-210ENST00000572787 DESI1Q6ICB0 168 aa6.26□□□□□ -1.41
TOPBP1-210ENST00000572787 C14orf80Q86SX3 495 aa6.26□□□□□ -1.41
TOPBP1-210ENST00000572787 TTC8Q8TAM2 541 aa6.26□□□□□ -1.41
TOPBP1-210ENST00000572787 AS3MTQ9HBK9 375 aa6.26□□□□□ -1.41
TOPBP1-210ENST00000572787 PCDHGA4Q9Y5G9 962 aa6.26□□□□□ -1.41
TOPBP1-210ENST00000572787 PPP2R3BQ9Y5P8 575 aa6.26□□□□□ -1.41
TOPBP1-210ENST00000572787 TMEM238LA0A1B0GVL6 79 aa6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 SHTN1A0MZ66 631 aa6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 FOXO3O43524 673 aa6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 LGR5O75473 907 aa6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 RASGRP1O95267 797 aa6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 LRRC41Q15345 812 aa6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 CCDC96Q2M329 555 aa6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 DDX42Q86XP3 938 aaKnown RBP eCLIP6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 IPO4Q8TEX9 1081 aaKnown RBP6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 CHAC2Q8WUX2 184 aa6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 HNRNPLLQ8WVV9 542 aaKnown RBP6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 PURBQ96QR8 312 aaKnown RBP6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 TSPAN18Q96SJ8 248 aa6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 MCM8Q9UJA3 840 aa6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 MSRB2Q9Y3D2 182 aa6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 GPSM3Q9Y4H4 160 aa6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 PCDHB9Q9Y5E1 797 aa6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 MRVI1Q9Y6F6 885 aa6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 WASHC2CQ9Y4E1 1318 aa6.25□□□□□ -1.41
TOPBP1-210ENST00000572787 DHX16O60231 1041 aaKnown RBP6.24□□□□□ -1.41
TOPBP1-210ENST00000572787 SLC34A2O95436 690 aa6.24□□□□□ -1.41
TOPBP1-210ENST00000572787 POLD1P28340 1107 aa6.24□□□□□ -1.41
TOPBP1-210ENST00000572787 ST13P50502 369 aaKnown RBP6.24□□□□□ -1.41
TOPBP1-210ENST00000572787 PTPN5P54829 565 aa6.24□□□□□ -1.41
TOPBP1-210ENST00000572787 MCL1Q07820 350 aa6.24□□□□□ -1.41
TOPBP1-210ENST00000572787 SQSTM1Q13501 440 aa6.24□□□□□ -1.41
TOPBP1-210ENST00000572787 TAF1CQ15572 869 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-210ENST00000572787 TKFCQ3LXA3 575 aa6.24□□□□□ -1.41
TOPBP1-210ENST00000572787 SLC4A10Q6U841 1118 aa6.24□□□□□ -1.41
TOPBP1-210ENST00000572787 LYPD8Q6UX82 237 aa6.24□□□□□ -1.41
TOPBP1-210ENST00000572787 ERMP1Q7Z2K6 904 aa6.24□□□□□ -1.41
TOPBP1-210ENST00000572787 CFHR5Q9BXR6 569 aa6.24□□□□□ -1.41
TOPBP1-210ENST00000572787 PRKAG3Q9UGI9 489 aa6.24□□□□□ -1.41
TOPBP1-210ENST00000572787 DOLKQ9UPQ8 538 aa6.24□□□□□ -1.41
TOPBP1-210ENST00000572787 GOLGA6CA6NDK9 693 aa6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 GOLGA6BA6NDN3 693 aa6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 TTC36A6NLP5 189 aa6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 SLC26A4O43511 780 aa6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 HRO43593 1189 aa6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 RNASEH2AO75792 299 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 IFIT2P09913 472 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 GOLGA6DP0CG33 693 aa6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 IGFBP4P22692 258 aa6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 SIM2Q14190 667 aaPredicted RBP6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 PUS10Q3MIT2 529 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 DALRD3Q5D0E6 543 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 CC2D1AQ6P1N0 951 aaPredicted RBP6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 SPICE1Q8N0Z3 855 aa6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 SPON2Q9BUD6 331 aa6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 GOLGA6AQ9NYA3 693 aa6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 POLG2Q9UHN1 485 aa6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 TAGLN3Q9UI15 199 aa6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 FBXO2Q9UK22 296 aaPredicted RBP6.23□□□□□ -1.41
TOPBP1-210ENST00000572787 GIPC1O14908 333 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 HIP1RO75146 1068 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 HSP90AB1P08238 724 aaKnown RBP6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 POU3F3P20264 500 aaPredicted RBP6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 PTK2Q05397 1052 aa6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 COL9A2Q14055 689 aaPredicted RBP6.22□□□□□ -1.41
TOPBP1-210ENST00000572787 TSGA10IPQ3SY00 556 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms