RNA–Protein interactions for RNA: ENST00000572686.1

SPOP-221, Transcript of speckle type BTB/POZ protein, humanhuman

Gene SPOP, Length 2,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-221ENST00000572686 ZBTB3Q9H5J0 574 aa9.56□□□□□ -0.88
SPOP-221ENST00000572686 FZD9O00144 591 aa9.55□□□□□ -0.88
SPOP-221ENST00000572686 HSPA1AP0DMV8 641 aaKnown RBP9.55□□□□□ -0.88
SPOP-221ENST00000572686 HSPA1BP0DMV9 641 aaKnown RBP9.55□□□□□ -0.88
SPOP-221ENST00000572686 HOXA10P31260 410 aaPredicted RBP9.55□□□□□ -0.88
SPOP-221ENST00000572686 LHX8Q68G74 356 aa9.55□□□□□ -0.88
SPOP-221ENST00000572686 GIGYF2Q6Y7W6 1299 aaKnown RBP9.55□□□□□ -0.88
SPOP-221ENST00000572686 LRP10Q7Z4F1 713 aa9.55□□□□□ -0.88
SPOP-221ENST00000572686 LDHDQ86WU2 507 aa9.55□□□□□ -0.88
SPOP-221ENST00000572686 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.55□□□□□ -0.88
SPOP-221ENST00000572686 COL4A5P29400 1685 aa9.55□□□□□ -0.88
SPOP-221ENST00000572686 ERBB4Q15303 1308 aa9.55□□□□□ -0.88
SPOP-221ENST00000572686 PASKQ96RG2 1323 aa9.55□□□□□ -0.88
SPOP-221ENST00000572686 NTSR2O95665 410 aa9.55□□□□□ -0.88
SPOP-221ENST00000572686 PDIA6Q15084 440 aa9.55□□□□□ -0.88
SPOP-221ENST00000572686 PSMD1Q99460 953 aa9.55□□□□□ -0.88
SPOP-221ENST00000572686 TSPYL4Q9UJ04 414 aa9.55□□□□□ -0.88
SPOP-221ENST00000572686 RIPK4P57078 832 aa9.54□□□□□ -0.88
SPOP-221ENST00000572686 SLC51AQ86UW1 340 aa9.54□□□□□ -0.88
SPOP-221ENST00000572686 BCL11AQ9H165 835 aa9.54□□□□□ -0.88
SPOP-221ENST00000572686 ANKRD36CQ5JPF3 1778 aa9.54□□□□□ -0.88
SPOP-221ENST00000572686 ITGBL1O95965 494 aaPredicted RBP9.53□□□□□ -0.88
SPOP-221ENST00000572686 CC2D2BQ6DHV5 1058 aa9.53□□□□□ -0.88
SPOP-221ENST00000572686 C3orf67Q6ZVT6 689 aa9.53□□□□□ -0.88
SPOP-221ENST00000572686 RPGRQ92834 1020 aaKnown RBP9.53□□□□□ -0.88
SPOP-221ENST00000572686 CRAMP1Q96RY5 1269 aa9.53□□□□□ -0.88
SPOP-221ENST00000572686 MKRN1Q9UHC7 482 aaKnown RBP9.53□□□□□ -0.88
SPOP-221ENST00000572686 HACL1Q9UJ83 578 aa9.53□□□□□ -0.88
SPOP-221ENST00000572686 LAMB2P55268 1798 aa9.53□□□□□ -0.88
SPOP-221ENST00000572686 GALR2O43603 387 aaPredicted RBP9.53□□□□□ -0.88
SPOP-221ENST00000572686 EIF2S2P20042 333 aaKnown RBP9.53□□□□□ -0.88
SPOP-221ENST00000572686 EPHX2P34913 555 aa9.53□□□□□ -0.88
SPOP-221ENST00000572686 TMPOP42166 694 aaKnown RBP9.53□□□□□ -0.88
SPOP-221ENST00000572686 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
SPOP-221ENST00000572686 CCDC27Q2M243 656 aa9.53□□□□□ -0.88
SPOP-221ENST00000572686 PROSER3Q2NL68 480 aa9.53□□□□□ -0.88
SPOP-221ENST00000572686 EAPPQ56P03 285 aaPredicted RBP9.53□□□□□ -0.88
SPOP-221ENST00000572686 WDR63Q8IWG1 891 aa9.53□□□□□ -0.88
SPOP-221ENST00000572686 GPC2Q8N158 579 aa9.53□□□□□ -0.88
SPOP-221ENST00000572686 PHF12Q96QT6 1004 aa9.53□□□□□ -0.88
SPOP-221ENST00000572686 BABAM1Q9NWV8 329 aa9.53□□□□□ -0.88
SPOP-221ENST00000572686 LTBP1Q14766 1721 aa9.53□□□□□ -0.88
SPOP-221ENST00000572686 TCERG1O14776 1098 aaKnown RBP9.52□□□□□ -0.89
SPOP-221ENST00000572686 ANXA1P04083 346 aa9.52□□□□□ -0.89
SPOP-221ENST00000572686 PPP1R42Q7Z4L9 355 aa9.52□□□□□ -0.89
SPOP-221ENST00000572686 RBM17Q96I25 401 aaKnown RBP9.52□□□□□ -0.89
SPOP-221ENST00000572686 ANP32EQ9BTT0 268 aa9.52□□□□□ -0.89
SPOP-221ENST00000572686 CNTNAP1P78357 1384 aa9.52□□□□□ -0.89
SPOP-221ENST00000572686 BCAR3O75815 825 aa9.52□□□□□ -0.89
SPOP-221ENST00000572686 PARP10Q53GL7 1025 aa9.52□□□□□ -0.89
SPOP-221ENST00000572686 SLC10A5Q5PT55 438 aa9.52□□□□□ -0.89
SPOP-221ENST00000572686 TNS4Q8IZW8 715 aa9.52□□□□□ -0.89
SPOP-221ENST00000572686 JDP2Q8WYK2 163 aa9.52□□□□□ -0.89
SPOP-221ENST00000572686 DCBLD2Q96PD2 775 aa9.52□□□□□ -0.89
SPOP-221ENST00000572686 PPEF1O14829 653 aaPredicted RBP9.51□□□□□ -0.89
SPOP-221ENST00000572686 GRIPAP1Q4V328 841 aa9.51□□□□□ -0.89
SPOP-221ENST00000572686 TAF1P21675 1872 aa9.51□□□□□ -0.89
SPOP-221ENST00000572686 TMEM88BA6NKF7 163 aa9.5□□□□□ -0.89
SPOP-221ENST00000572686 EIF6P56537 245 aaKnown RBP9.5□□□□□ -0.89
SPOP-221ENST00000572686 MAP1SQ66K74 1059 aaPredicted RBP9.5□□□□□ -0.89
SPOP-221ENST00000572686 COPS6Q7L5N1 327 aa9.5□□□□□ -0.89
SPOP-221ENST00000572686 PNMA8AQ86V59 439 aaPredicted RBP9.5□□□□□ -0.89
SPOP-221ENST00000572686 CNTROBQ8N137 903 aa9.5□□□□□ -0.89
SPOP-221ENST00000572686 NECTIN2Q92692 538 aa9.5□□□□□ -0.89
SPOP-221ENST00000572686 NLRP3Q96P20 1036 aa9.5□□□□□ -0.89
SPOP-221ENST00000572686 UTP14AQ9BVJ6 771 aaKnown RBP9.5□□□□□ -0.89
SPOP-221ENST00000572686 GJA3Q9Y6H8 435 aa9.5□□□□□ -0.89
SPOP-221ENST00000572686 LMOD3Q0VAK6 560 aa9.5□□□□□ -0.89
SPOP-221ENST00000572686 KRT24Q2M2I5 525 aa9.5□□□□□ -0.89
SPOP-221ENST00000572686 LARGE2Q8N3Y3 721 aa9.5□□□□□ -0.89
SPOP-221ENST00000572686 XAGE3Q8WTP9 111 aa9.5□□□□□ -0.89
SPOP-221ENST00000572686 CHL1O00533 1208 aa9.49□□□□□ -0.89
SPOP-221ENST00000572686 MS4A1P11836 297 aa9.49□□□□□ -0.89
SPOP-221ENST00000572686 VEGFBP49765 207 aa9.49□□□□□ -0.89
SPOP-221ENST00000572686 SCNN1DP51172 638 aa9.49□□□□□ -0.89
SPOP-221ENST00000572686 AIMP1Q12904 312 aaKnown RBP9.49□□□□□ -0.89
SPOP-221ENST00000572686 NLRP10Q86W26 655 aa9.49□□□□□ -0.89
SPOP-221ENST00000572686 TRIM35Q9UPQ4 493 aa9.49□□□□□ -0.89
SPOP-221ENST00000572686 ATP6V0A2Q9Y487 856 aa9.49□□□□□ -0.89
SPOP-221ENST00000572686 ABCC4O15439 1325 aa9.49□□□□□ -0.89
SPOP-221ENST00000572686 EPS15P42566 896 aa9.49□□□□□ -0.89
SPOP-221ENST00000572686 DDX21Q9NR30 783 aaKnown RBP eCLIP9.49□□□□□ -0.89
SPOP-221ENST00000572686 TRPM7Q96QT4 1865 aa9.48□□□□□ -0.89
SPOP-221ENST00000572686 FOXN1O15353 648 aa9.48□□□□□ -0.89
SPOP-221ENST00000572686 PPIP5K2O43314 1243 aa9.48□□□□□ -0.89
SPOP-221ENST00000572686 HCLS1P14317 486 aaPredicted RBP9.48□□□□□ -0.89
SPOP-221ENST00000572686 TCIRG1Q13488 830 aa9.48□□□□□ -0.89
SPOP-221ENST00000572686 PDE3AQ14432 1141 aa9.48□□□□□ -0.89
SPOP-221ENST00000572686 AOC3Q16853 763 aa9.48□□□□□ -0.89
SPOP-221ENST00000572686 HSP90AB3PQ58FF7 597 aa9.48□□□□□ -0.89
SPOP-221ENST00000572686 RTFDC1Q9BY42 306 aaPredicted RBP9.48□□□□□ -0.89
SPOP-221ENST00000572686 DDX60Q8IY21 1712 aaKnown RBP9.48□□□□□ -0.89
SPOP-221ENST00000572686 LMOD1P29536 600 aaPredicted RBP9.47□□□□□ -0.89
SPOP-221ENST00000572686 PAXIP1Q6ZW49 1069 aaPredicted RBP9.47□□□□□ -0.89
SPOP-221ENST00000572686 CENPQQ7L2Z9 268 aaPredicted RBP9.47□□□□□ -0.89
SPOP-221ENST00000572686 NIM1KQ8IY84 436 aa9.47□□□□□ -0.89
SPOP-221ENST00000572686 VPS33BQ9H267 617 aa9.47□□□□□ -0.89
SPOP-221ENST00000572686 RASSF10A6NK89 507 aa9.47□□□□□ -0.89
SPOP-221ENST00000572686 BBOX1O75936 387 aa9.47□□□□□ -0.89
SPOP-221ENST00000572686 RARSP54136 660 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms