RNA–Protein interactions for RNA: ENST00000572433.5

ITGAE-208, Transcript of integrin subunit alpha E, humanhuman

TSL 2

Gene ITGAE, Length 731 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-208ENST00000572433 TNP2Q05952 138 aa13.24□□□□□ -0.29
ITGAE-208ENST00000572433 CCINQ13939 588 aa13.24□□□□□ -0.29
ITGAE-208ENST00000572433 UBAP2LQ14157 1087 aaKnown RBP13.24□□□□□ -0.29
ITGAE-208ENST00000572433 TTC39BQ5VTQ0 682 aaPredicted RBP13.24□□□□□ -0.29
ITGAE-208ENST00000572433 PMEPA1Q969W9 287 aa13.24□□□□□ -0.29
ITGAE-208ENST00000572433 GMPR2Q9P2T1 348 aaKnown RBP13.24□□□□□ -0.29
ITGAE-208ENST00000572433 MAPTP10636 758 aaKnown RBP13.23□□□□□ -0.29
ITGAE-208ENST00000572433 ITGA6P23229 1130 aa13.23□□□□□ -0.29
ITGAE-208ENST00000572433 TSNAXIP1Q2TAA8 658 aa13.23□□□□□ -0.29
ITGAE-208ENST00000572433 FAM161BQ96MY7 647 aa13.23□□□□□ -0.29
ITGAE-208ENST00000572433 CUEDC1Q9NWM3 386 aaPredicted RBP13.23□□□□□ -0.29
ITGAE-208ENST00000572433 SPG7Q9UQ90 795 aa13.23□□□□□ -0.29
ITGAE-208ENST00000572433 CCDC74AQ96AQ1 378 aa13.22□□□□□ -0.29
ITGAE-208ENST00000572433 MARK1Q9P0L2 795 aa13.22□□□□□ -0.29
ITGAE-208ENST00000572433 VTI1BQ9UEU0 232 aa13.22□□□□□ -0.29
ITGAE-208ENST00000572433 USPL1Q5W0Q7 1092 aa13.21□□□□□ -0.29
ITGAE-208ENST00000572433 ZNF837Q96EG3 531 aaPredicted RBP13.21□□□□□ -0.29
ITGAE-208ENST00000572433 GSX2Q9BZM3 304 aa13.21□□□□□ -0.29
ITGAE-208ENST00000572433 EFCC1Q9HA90 598 aa13.21□□□□□ -0.29
ITGAE-208ENST00000572433 RNF19AQ9NV58 838 aa13.21□□□□□ -0.29
ITGAE-208ENST00000572433 NDFIP2Q9NV92 336 aa13.21□□□□□ -0.29
ITGAE-208ENST00000572433 NLRP2Q9NX02 1062 aa13.21□□□□□ -0.29
ITGAE-208ENST00000572433 PHF24Q9UPV7 400 aa13.21□□□□□ -0.29
ITGAE-208ENST00000572433 BNIP3LO60238 219 aa13.2□□□□□ -0.3
ITGAE-208ENST00000572433 SASH3O75995 380 aa13.2□□□□□ -0.3
ITGAE-208ENST00000572433 C1orf127Q8N9H9 656 aa13.2□□□□□ -0.3
ITGAE-208ENST00000572433 PNMA5Q96PV4 448 aa13.2□□□□□ -0.3
ITGAE-208ENST00000572433 BACH2Q9BYV9 841 aa13.2□□□□□ -0.3
ITGAE-208ENST00000572433 ATXN7L1Q9ULK2 861 aaPredicted RBP13.2□□□□□ -0.3
ITGAE-208ENST00000572433 CHRDQ9H2X0 955 aa13.19□□□□□ -0.3
ITGAE-208ENST00000572433 CNTN3Q9P232 1028 aa13.19□□□□□ -0.3
ITGAE-208ENST00000572433 GIPC1O14908 333 aa13.18□□□□□ -0.3
ITGAE-208ENST00000572433 CES1P23141 567 aa13.18□□□□□ -0.3
ITGAE-208ENST00000572433 SPEM2Q0P670 501 aa13.18□□□□□ -0.3
ITGAE-208ENST00000572433 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.18□□□□□ -0.3
ITGAE-208ENST00000572433 FOXR1Q6PIV2 292 aa13.18□□□□□ -0.3
ITGAE-208ENST00000572433 KRT25Q7Z3Z0 450 aa13.18□□□□□ -0.3
ITGAE-208ENST00000572433 GTPBP3Q969Y2 492 aaKnown RBP13.18□□□□□ -0.3
ITGAE-208ENST00000572433 ABHD17AQ96GS6 310 aa13.18□□□□□ -0.3
ITGAE-208ENST00000572433 STRN4Q9NRL3 753 aa13.18□□□□□ -0.3
ITGAE-208ENST00000572433 AK5Q9Y6K8 562 aa13.18□□□□□ -0.3
ITGAE-208ENST00000572433 RARAP10276 462 aa13.17□□□□□ -0.3
ITGAE-208ENST00000572433 SNRPBP14678 240 aaKnown RBP13.17□□□□□ -0.3
ITGAE-208ENST00000572433 TARSP26639 723 aaKnown RBP13.17□□□□□ -0.3
ITGAE-208ENST00000572433 PHF20L1A8MW92 1017 aa13.16□□□□□ -0.3
ITGAE-208ENST00000572433 C11orf95C9JLR9 678 aaPredicted RBP13.16□□□□□ -0.3
ITGAE-208ENST00000572433 EREGO14944 169 aa13.16□□□□□ -0.3
ITGAE-208ENST00000572433 GALNT12Q8IXK2 581 aa13.16□□□□□ -0.3
ITGAE-208ENST00000572433 TRERF1Q96PN7 1200 aa13.16□□□□□ -0.3
ITGAE-208ENST00000572433 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.16□□□□□ -0.3
ITGAE-208ENST00000572433 SCAMP3O14828 347 aaKnown RBP13.15□□□□□ -0.3
ITGAE-208ENST00000572433 EIF4BP23588 611 aaKnown RBP13.15□□□□□ -0.3
ITGAE-208ENST00000572433 NEUROD1Q13562 356 aa13.15□□□□□ -0.3
ITGAE-208ENST00000572433 Q6ZNB5 142 aa13.15□□□□□ -0.3
ITGAE-208ENST00000572433 OR13H1Q8NG92 308 aa13.15□□□□□ -0.3
ITGAE-208ENST00000572433 EPS8L3Q8TE67 593 aaKnown RBP13.15□□□□□ -0.3
ITGAE-208ENST00000572433 MMP20O60882 483 aa13.14□□□□□ -0.31
ITGAE-208ENST00000572433 POLR3DP05423 398 aaPredicted RBP13.14□□□□□ -0.31
ITGAE-208ENST00000572433 NFKB1P19838 968 aa13.14□□□□□ -0.31
ITGAE-208ENST00000572433 CD33P20138 364 aa13.14□□□□□ -0.31
ITGAE-208ENST00000572433 FAM182BQ5T319 152 aa13.14□□□□□ -0.31
ITGAE-208ENST00000572433 TMEM87AQ8NBN3 555 aa13.14□□□□□ -0.31
ITGAE-208ENST00000572433 NPHS2Q9NP85 383 aa13.14□□□□□ -0.31
ITGAE-208ENST00000572433 PPFIA3O75145 1194 aa13.13□□□□□ -0.31
ITGAE-208ENST00000572433 PSAPP07602 524 aa13.13□□□□□ -0.31
ITGAE-208ENST00000572433 EDN3P14138 238 aa13.13□□□□□ -0.31
ITGAE-208ENST00000572433 FGFR3P22607 806 aa13.13□□□□□ -0.31
ITGAE-208ENST00000572433 IRS1P35568 1242 aa13.13□□□□□ -0.31
ITGAE-208ENST00000572433 CDC14CA4D256 554 aa13.12□□□□□ -0.31
ITGAE-208ENST00000572433 GADD45BO75293 160 aaPredicted RBP13.12□□□□□ -0.31
ITGAE-208ENST00000572433 MAP3K6O95382 1288 aa13.12□□□□□ -0.31
ITGAE-208ENST00000572433 VEGFBP49765 207 aa13.12□□□□□ -0.31
ITGAE-208ENST00000572433 PI16Q6UXB8 463 aa13.12□□□□□ -0.31
ITGAE-208ENST00000572433 BHMTQ93088 406 aa13.12□□□□□ -0.31
ITGAE-208ENST00000572433 CRELD1Q96HD1 420 aa13.12□□□□□ -0.31
ITGAE-208ENST00000572433 SLC30A3Q99726 388 aa13.12□□□□□ -0.31
ITGAE-208ENST00000572433 C12orf49Q9H741 205 aa13.12□□□□□ -0.31
ITGAE-208ENST00000572433 ZFATQ9P243 1243 aa13.12□□□□□ -0.31
ITGAE-208ENST00000572433 CYP2E1P05181 493 aaPredicted RBP13.11□□□□□ -0.31
ITGAE-208ENST00000572433 SOX18P35713 384 aa13.11□□□□□ -0.31
ITGAE-208ENST00000572433 GRIN2CQ14957 1233 aa13.11□□□□□ -0.31
ITGAE-208ENST00000572433 SRCIN1Q9C0H9 1055 aa13.11□□□□□ -0.31
ITGAE-208ENST00000572433 TLR7Q9NYK1 1049 aaKnown RBP13.11□□□□□ -0.31
ITGAE-208ENST00000572433 KANSL3Q9P2N6 904 aa13.11□□□□□ -0.31
ITGAE-208ENST00000572433 HCN2Q9UL51 889 aa13.11□□□□□ -0.31
ITGAE-208ENST00000572433 LDLRAD1Q5T700 205 aa13.1□□□□□ -0.31
ITGAE-208ENST00000572433 PLAURQ03405 335 aa13.09□□□□□ -0.31
ITGAE-208ENST00000572433 SV2AQ7L0J3 742 aa13.09□□□□□ -0.31
ITGAE-208ENST00000572433 SUV39H2Q9H5I1 410 aa13.09□□□□□ -0.31
ITGAE-208ENST00000572433 METTL5Q9NRN9 209 aaKnown RBP13.09□□□□□ -0.31
ITGAE-208ENST00000572433 HOXD8P13378 290 aaPredicted RBP13.08□□□□□ -0.32
ITGAE-208ENST00000572433 HYAL2Q12891 473 aa13.08□□□□□ -0.32
ITGAE-208ENST00000572433 KIAA0319Q5VV43 1072 aa13.08□□□□□ -0.32
ITGAE-208ENST00000572433 VWA5B2Q8N398 1253 aa13.08□□□□□ -0.32
ITGAE-208ENST00000572433 OSBPL7Q9BZF2 842 aa13.08□□□□□ -0.32
ITGAE-208ENST00000572433 FAM8A1Q9UBU6 413 aa13.08□□□□□ -0.32
ITGAE-208ENST00000572433 RAB44Q7Z6P3 723 aaPredicted RBP13.07□□□□□ -0.32
ITGAE-208ENST00000572433 NANOS1Q8WY41 292 aaKnown RBP13.07□□□□□ -0.32
ITGAE-208ENST00000572433 BCO2Q9BYV7 579 aa13.07□□□□□ -0.32
ITGAE-208ENST00000572433 SALL4Q9UJQ4 1053 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms