RNA–Protein interactions for RNA: ENST00000572433.5

ITGAE-208, Transcript of integrin subunit alpha E, humanhuman

TSL 2

Gene ITGAE, Length 731 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-208ENST00000572433 AEBP2Q6ZN18 517 aaPredicted RBP35.3■■■■□ 3.24
ITGAE-208ENST00000572433 CHIC1Q5VXU3 224 aa35.27■■■■□ 3.24
ITGAE-208ENST00000572433 PHF23Q9BUL5 403 aaPredicted RBP31.04■■■□□ 2.56
ITGAE-208ENST00000572433 SENP3Q9H4L4 574 aaPredicted RBP29.95■■■□□ 2.39
ITGAE-208ENST00000572433 PLPPR3Q6T4P5 718 aa29.01■■■□□ 2.23
ITGAE-208ENST00000572433 FOXD1Q16676 465 aa27.63■■■□□ 2.01
ITGAE-208ENST00000572433 ADRA2BP18089 450 aa27.18■■□□□ 1.94
ITGAE-208ENST00000572433 PPP6R1Q9UPN7 881 aa27.13■■□□□ 1.93
ITGAE-208ENST00000572433 PIAS4Q8N2W9 510 aaPredicted RBP26.28■■□□□ 1.8
ITGAE-208ENST00000572433 KCNA4P22459 653 aa25.84■■□□□ 1.73
ITGAE-208ENST00000572433 PPP4R3CPQ6ZMV5 832 aa25.62■■□□□ 1.69
ITGAE-208ENST00000572433 MSH5O43196 834 aa25.26■■□□□ 1.63
ITGAE-208ENST00000572433 NCBP3Q53F19 620 aaKnown RBP25.24■■□□□ 1.63
ITGAE-208ENST00000572433 SCAF1Q9H7N4 1312 aaKnown RBP24.97■■□□□ 1.59
ITGAE-208ENST00000572433 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
ITGAE-208ENST00000572433 NPM3O75607 178 aaKnown RBP24.79■■□□□ 1.56
ITGAE-208ENST00000572433 SLC4A1APQ9BWU0 796 aaKnown RBP24.79■■□□□ 1.56
ITGAE-208ENST00000572433 CNKSR2Q8WXI2 1034 aa24.77■■□□□ 1.56
ITGAE-208ENST00000572433 MAPK8IP2Q13387 824 aaPredicted RBP24.41■■□□□ 1.5
ITGAE-208ENST00000572433 CSRNP3Q8WYN3 585 aa24.26■■□□□ 1.47
ITGAE-208ENST00000572433 RNF216Q9NWF9 866 aaPredicted RBP24.1■■□□□ 1.45
ITGAE-208ENST00000572433 DNAJC5BQ9UF47 199 aa24■■□□□ 1.43
ITGAE-208ENST00000572433 DMRT2Q9Y5R5 561 aa23.99■■□□□ 1.43
ITGAE-208ENST00000572433 HOXD11P31277 338 aaPredicted RBP23.79■■□□□ 1.4
ITGAE-208ENST00000572433 ZBTB22O15209 634 aa23.76■■□□□ 1.39
ITGAE-208ENST00000572433 FOXD4L1Q9NU39 408 aa23.63■■□□□ 1.37
ITGAE-208ENST00000572433 SLC4A2P04920 1241 aa23.2■■□□□ 1.3
ITGAE-208ENST00000572433 MYCNP04198 464 aaPredicted RBP22.94■■□□□ 1.26
ITGAE-208ENST00000572433 DCAF8L1A6NGE4 600 aa22.93■■□□□ 1.26
ITGAE-208ENST00000572433 ATXN8OSP0DMR3 200 aa22.76■■□□□ 1.23
ITGAE-208ENST00000572433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.7■■□□□ 1.22
ITGAE-208ENST00000572433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.45■■□□□ 1.18
ITGAE-208ENST00000572433 HNRNPUL2Q1KMD3 747 aaKnown RBP22.45■■□□□ 1.18
ITGAE-208ENST00000572433 SAMD1Q6SPF0 538 aaPredicted RBP22.38■■□□□ 1.17
ITGAE-208ENST00000572433 U3KPZ7 1027 aaPredicted RBP22.37■■□□□ 1.17
ITGAE-208ENST00000572433 ATF5Q9Y2D1 282 aaPredicted RBP22.16■■□□□ 1.14
ITGAE-208ENST00000572433 APLP2Q06481 763 aa22.06■■□□□ 1.12
ITGAE-208ENST00000572433 FKBP8Q14318 412 aa21.92■■□□□ 1.1
ITGAE-208ENST00000572433 ZNF219Q9P2Y4 722 aaPredicted RBP21.81■■□□□ 1.08
ITGAE-208ENST00000572433 RNF39Q9H2S5 420 aa21.68■■□□□ 1.06
ITGAE-208ENST00000572433 POTEDQ86YR6 584 aa21.64■■□□□ 1.05
ITGAE-208ENST00000572433 C1QBPQ07021 282 aaKnown RBP21.51■■□□□ 1.03
ITGAE-208ENST00000572433 TRHP20396 242 aaPredicted RBP21.5■■□□□ 1.03
ITGAE-208ENST00000572433 SPINK5Q9NQ38 1064 aaPredicted RBP21.5■■□□□ 1.03
ITGAE-208ENST00000572433 CAPN15O75808 1086 aa21.44■■□□□ 1.02
ITGAE-208ENST00000572433 AMER1Q5JTC6 1135 aaPredicted RBP21.34■■□□□ 1.01
ITGAE-208ENST00000572433 FBLN2P98095 1184 aa21.32■■□□□ 1
ITGAE-208ENST00000572433 POLA2Q14181 598 aa21.31■■□□□ 1
ITGAE-208ENST00000572433 MKRN4PQ13434 485 aaPredicted RBP21.27■■□□□ 1
ITGAE-208ENST00000572433 RTN4Q9NQC3 1192 aaKnown RBP21.22■□□□□ 0.99
ITGAE-208ENST00000572433 SPDYE4A6NLX3 237 aa21.21■□□□□ 0.99
ITGAE-208ENST00000572433 ZBTB12Q9Y330 459 aaPredicted RBP21.12■□□□□ 0.97
ITGAE-208ENST00000572433 ABCB7O75027 752 aa21.06■□□□□ 0.96
ITGAE-208ENST00000572433 FBXO3Q9UK99 471 aa21.01■□□□□ 0.95
ITGAE-208ENST00000572433 PROM2Q8N271 834 aa20.95■□□□□ 0.94
ITGAE-208ENST00000572433 DSG3P32926 999 aa20.87■□□□□ 0.93
ITGAE-208ENST00000572433 VASPP50552 380 aaPredicted RBP20.65■□□□□ 0.9
ITGAE-208ENST00000572433 CACNB1Q02641 598 aaPredicted RBP20.6■□□□□ 0.89
ITGAE-208ENST00000572433 ZNF692Q9BU19 519 aaPredicted RBP20.58■□□□□ 0.89
ITGAE-208ENST00000572433 SPDYE2BA6NHP3 402 aa20.57■□□□□ 0.88
ITGAE-208ENST00000572433 SPDYE6P0CI01 402 aa20.57■□□□□ 0.88
ITGAE-208ENST00000572433 SPDYE2Q495Y8 402 aa20.57■□□□□ 0.88
ITGAE-208ENST00000572433 OSCARQ8IYS5 282 aa20.56■□□□□ 0.88
ITGAE-208ENST00000572433 SSUH2Q9Y2M2 353 aa20.45■□□□□ 0.86
ITGAE-208ENST00000572433 SLC24A1O60721 1099 aa20.44■□□□□ 0.86
ITGAE-208ENST00000572433 IFNLR1Q8IU57 520 aaPredicted RBP20.38■□□□□ 0.85
ITGAE-208ENST00000572433 STAG3Q9UJ98 1225 aa20.33■□□□□ 0.85
ITGAE-208ENST00000572433 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
ITGAE-208ENST00000572433 KLHL34Q8N239 644 aa20.15■□□□□ 0.82
ITGAE-208ENST00000572433 PLCD3Q8N3E9 789 aa20.12■□□□□ 0.81
ITGAE-208ENST00000572433 SPOCK2Q92563 424 aa20.08■□□□□ 0.81
ITGAE-208ENST00000572433 MIER1Q8N108 512 aa20.04■□□□□ 0.8
ITGAE-208ENST00000572433 PKD2Q13563 968 aa19.99■□□□□ 0.79
ITGAE-208ENST00000572433 PLEKHG5O94827 1062 aa19.96■□□□□ 0.79
ITGAE-208ENST00000572433 RBM42Q9BTD8 480 aaKnown RBP19.96■□□□□ 0.79
ITGAE-208ENST00000572433 DCAF8L2P0C7V8 631 aa19.89■□□□□ 0.77
ITGAE-208ENST00000572433 ZBTB47Q9UFB7 747 aaPredicted RBP19.89■□□□□ 0.77
ITGAE-208ENST00000572433 AKT1S1Q96B36 256 aa19.84■□□□□ 0.77
ITGAE-208ENST00000572433 SPDYE1Q8NFV5 336 aaPredicted RBP19.79■□□□□ 0.76
ITGAE-208ENST00000572433 ECM2O94769 699 aaPredicted RBP19.78■□□□□ 0.76
ITGAE-208ENST00000572433 PLCB2Q00722 1185 aa19.68■□□□□ 0.74
ITGAE-208ENST00000572433 CIZ1Q9ULV3 898 aaPredicted RBP19.63■□□□□ 0.73
ITGAE-208ENST00000572433 CLEC11AQ9Y240 323 aa19.62■□□□□ 0.73
ITGAE-208ENST00000572433 REM2Q8IYK8 340 aaPredicted RBP19.61■□□□□ 0.73
ITGAE-208ENST00000572433 PRR29P0C7W0 189 aa19.57■□□□□ 0.72
ITGAE-208ENST00000572433 TRIM41Q8WV44 630 aa19.54■□□□□ 0.72
ITGAE-208ENST00000572433 RGL2O15211 777 aa19.52■□□□□ 0.72
ITGAE-208ENST00000572433 GSE1Q14687 1217 aa19.47■□□□□ 0.71
ITGAE-208ENST00000572433 CREBZFQ9NS37 354 aa19.45■□□□□ 0.7
ITGAE-208ENST00000572433 BBXQ8WY36 941 aaPredicted RBP19.44■□□□□ 0.7
ITGAE-208ENST00000572433 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.44■□□□□ 0.7
ITGAE-208ENST00000572433 NUBP1P53384 320 aa19.42■□□□□ 0.7
ITGAE-208ENST00000572433 HAP1P54257 671 aaPredicted RBP19.39■□□□□ 0.69
ITGAE-208ENST00000572433 PITPNM1O00562 1244 aa19.37■□□□□ 0.69
ITGAE-208ENST00000572433 NPM1P06748 294 aaKnown RBP eCLIP19.36■□□□□ 0.69
ITGAE-208ENST00000572433 MNX1P50219 401 aaPredicted RBP19.33■□□□□ 0.68
ITGAE-208ENST00000572433 DCAF8Q5TAQ9 597 aa19.33■□□□□ 0.68
ITGAE-208ENST00000572433 FAM212AQ96EL1 285 aa19.31■□□□□ 0.68
ITGAE-208ENST00000572433 CHGAP10645 457 aaKnown RBP19.26■□□□□ 0.67
ITGAE-208ENST00000572433 PAXIP1Q6ZW49 1069 aaPredicted RBP19.22■□□□□ 0.67
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