RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 MAGI3Q5TCQ9 1506 aa8.06□□□□□ -1.12
CASC4-207ENST00000559037 ABCA9Q8IUA7 1624 aa8.05□□□□□ -1.12
CASC4-207ENST00000559037 LGR5O75473 907 aa8.05□□□□□ -1.12
CASC4-207ENST00000559037 ATP2B4P23634 1241 aa8.05□□□□□ -1.12
CASC4-207ENST00000559037 ADH6P28332 368 aa8.05□□□□□ -1.12
CASC4-207ENST00000559037 RANGAP1P46060 587 aaPredicted RBP8.05□□□□□ -1.12
CASC4-207ENST00000559037 CTBSQ01459 385 aa8.05□□□□□ -1.12
CASC4-207ENST00000559037 C11orf91Q3C1V1 193 aa8.05□□□□□ -1.12
CASC4-207ENST00000559037 ZNF468Q5VIY5 522 aaPredicted RBP8.05□□□□□ -1.12
CASC4-207ENST00000559037 B4GALNT3Q6L9W6 998 aa8.05□□□□□ -1.12
CASC4-207ENST00000559037 ACDQ96AP0 544 aa8.05□□□□□ -1.12
CASC4-207ENST00000559037 HSH2DQ96JZ2 352 aa8.05□□□□□ -1.12
CASC4-207ENST00000559037 BRD7Q9NPI1 651 aa8.05□□□□□ -1.12
CASC4-207ENST00000559037 NUP153P49790 1475 aaKnown RBP8.05□□□□□ -1.12
CASC4-207ENST00000559037 FHOD3Q2V2M9 1422 aa8.04□□□□□ -1.12
CASC4-207ENST00000559037 RNF225M0QZC1 329 aaPredicted RBP8.04□□□□□ -1.12
CASC4-207ENST00000559037 OIP5O43482 229 aa8.04□□□□□ -1.12
CASC4-207ENST00000559037 CD33P20138 364 aa8.04□□□□□ -1.12
CASC4-207ENST00000559037 LYPD4Q6UWN0 246 aa8.04□□□□□ -1.12
CASC4-207ENST00000559037 TMEM88BA6NKF7 163 aa8.03□□□□□ -1.12
CASC4-207ENST00000559037 C2CD2LO14523 706 aa8.03□□□□□ -1.12
CASC4-207ENST00000559037 ARHGEF15O94989 841 aa8.03□□□□□ -1.12
CASC4-207ENST00000559037 DGKZQ13574 1117 aa8.03□□□□□ -1.12
CASC4-207ENST00000559037 C16orf46Q6P387 395 aa8.03□□□□□ -1.12
CASC4-207ENST00000559037 ZNF280CQ8ND82 737 aa8.03□□□□□ -1.12
CASC4-207ENST00000559037 PRR12Q9ULL5 1215 aa8.03□□□□□ -1.12
CASC4-207ENST00000559037 KCNH4Q9UQ05 1017 aa8.03□□□□□ -1.12
CASC4-207ENST00000559037 WHAMMQ8TF30 809 aa8.02□□□□□ -1.13
CASC4-207ENST00000559037 LRRIQ1Q96JM4 1722 aa8.02□□□□□ -1.13
CASC4-207ENST00000559037 ARHGAP35Q9NRY4 1499 aa8.01□□□□□ -1.13
CASC4-207ENST00000559037 PLEKHD1A6NEE1 506 aa8.01□□□□□ -1.13
CASC4-207ENST00000559037 BRD2P25440 801 aaKnown RBP8.01□□□□□ -1.13
CASC4-207ENST00000559037 ARSDP51689 593 aa8.01□□□□□ -1.13
CASC4-207ENST00000559037 DMGDHQ9UI17 866 aaKnown RBP8.01□□□□□ -1.13
CASC4-207ENST00000559037 GGA1Q9UJY5 639 aa8.01□□□□□ -1.13
CASC4-207ENST00000559037 MTMR7Q9Y216 660 aa8.01□□□□□ -1.13
CASC4-207ENST00000559037 ARAP3Q8WWN8 1544 aa8.01□□□□□ -1.13
CASC4-207ENST00000559037 PHLDB1Q86UU1 1377 aa8□□□□□ -1.13
CASC4-207ENST00000559037 SIN3BO75182 1162 aa8□□□□□ -1.13
CASC4-207ENST00000559037 SPEM2Q0P670 501 aa8□□□□□ -1.13
CASC4-207ENST00000559037 COX20Q5RI15 118 aa8□□□□□ -1.13
CASC4-207ENST00000559037 STRN4Q9NRL3 753 aa8□□□□□ -1.13
CASC4-207ENST00000559037 FAM13BQ9NYF5 915 aa8□□□□□ -1.13
CASC4-207ENST00000559037 KLK14Q9P0G3 267 aa8□□□□□ -1.13
CASC4-207ENST00000559037 HCN2Q9UL51 889 aa8□□□□□ -1.13
CASC4-207ENST00000559037 ADAMTS8Q9UP79 889 aa8□□□□□ -1.13
CASC4-207ENST00000559037 BCS1LQ9Y276 419 aa8□□□□□ -1.13
CASC4-207ENST00000559037 MICAL2O94851 1124 aa7.99□□□□□ -1.13
CASC4-207ENST00000559037 EPXP11678 715 aa7.99□□□□□ -1.13
CASC4-207ENST00000559037 IDH3AP50213 366 aa7.99□□□□□ -1.13
CASC4-207ENST00000559037 SFSWAPQ12872 951 aaKnown RBP7.99□□□□□ -1.13
CASC4-207ENST00000559037 NEDD1Q8NHV4 660 aa7.99□□□□□ -1.13
CASC4-207ENST00000559037 EDARADDQ8WWZ3 215 aa7.99□□□□□ -1.13
CASC4-207ENST00000559037 IFT43Q96FT9 208 aa7.99□□□□□ -1.13
CASC4-207ENST00000559037 SCARF2Q96GP6 870 aaPredicted RBP7.99□□□□□ -1.13
CASC4-207ENST00000559037 ARID3AQ99856 593 aa7.99□□□□□ -1.13
CASC4-207ENST00000559037 LRFN2Q9ULH4 789 aa7.99□□□□□ -1.13
CASC4-207ENST00000559037 FMN1Q68DA7 1419 aa7.98□□□□□ -1.13
CASC4-207ENST00000559037 PIK3R2O00459 728 aa7.98□□□□□ -1.13
CASC4-207ENST00000559037 SSFA2P28290 1259 aa7.98□□□□□ -1.13
CASC4-207ENST00000559037 INPP5BP32019 993 aa7.98□□□□□ -1.13
CASC4-207ENST00000559037 MARSP56192 900 aaKnown RBP7.98□□□□□ -1.13
CASC4-207ENST00000559037 PODNQ7Z5L7 613 aa7.98□□□□□ -1.13
CASC4-207ENST00000559037 ABTB2Q8N961 1025 aa7.98□□□□□ -1.13
CASC4-207ENST00000559037 GALNT6Q8NCL4 622 aa7.98□□□□□ -1.13
CASC4-207ENST00000559037 TNFRSF25Q93038 417 aa7.98□□□□□ -1.13
CASC4-207ENST00000559037 SLAIN2Q9P270 581 aa7.98□□□□□ -1.13
CASC4-207ENST00000559037 DNMT3AQ9Y6K1 912 aaPredicted RBP7.98□□□□□ -1.13
CASC4-207ENST00000559037 NEURL1BA8MQ27 555 aa7.97□□□□□ -1.13
CASC4-207ENST00000559037 ADARB2-AS1A8MUL3 147 aa7.97□□□□□ -1.13
CASC4-207ENST00000559037 SYT9Q86SS6 491 aa7.97□□□□□ -1.13
CASC4-207ENST00000559037 MKNK1Q9BUB5 465 aa7.97□□□□□ -1.13
CASC4-207ENST00000559037 NEO1Q92859 1461 aa7.97□□□□□ -1.13
CASC4-207ENST00000559037 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.97□□□□□ -1.13
CASC4-207ENST00000559037 RICTORQ6R327 1708 aa7.96□□□□□ -1.14
CASC4-207ENST00000559037 PHF20L1A8MW92 1017 aa7.96□□□□□ -1.14
CASC4-207ENST00000559037 CCINQ13939 588 aa7.96□□□□□ -1.14
CASC4-207ENST00000559037 KANK3Q6NY19 840 aa7.96□□□□□ -1.14
CASC4-207ENST00000559037 TREML1Q86YW5 311 aa7.96□□□□□ -1.14
CASC4-207ENST00000559037 STIM2Q9P246 746 aa7.96□□□□□ -1.14
CASC4-207ENST00000559037 CDK13Q14004 1512 aaKnown RBP7.96□□□□□ -1.14
CASC4-207ENST00000559037 ELOA3CA0A087WX78 387 aaPredicted RBP7.95□□□□□ -1.14
CASC4-207ENST00000559037 ELOA3DA6NLF2 546 aaPredicted RBP7.95□□□□□ -1.14
CASC4-207ENST00000559037 RAPGEF3O95398 923 aa7.95□□□□□ -1.14
CASC4-207ENST00000559037 ALAS2P22557 587 aa7.95□□□□□ -1.14
CASC4-207ENST00000559037 PCSK7Q16549 785 aa7.95□□□□□ -1.14
CASC4-207ENST00000559037 ELOA3BQ3SY89 546 aa7.95□□□□□ -1.14
CASC4-207ENST00000559037 FCHSD1Q86WN1 690 aa7.95□□□□□ -1.14
CASC4-207ENST00000559037 BEND7Q8N7W2 519 aaPredicted RBP7.95□□□□□ -1.14
CASC4-207ENST00000559037 ELOA3Q8NG57 546 aa7.95□□□□□ -1.14
CASC4-207ENST00000559037 HELQQ8TDG4 1101 aa7.95□□□□□ -1.14
CASC4-207ENST00000559037 PNMA5Q96PV4 448 aa7.95□□□□□ -1.14
CASC4-207ENST00000559037 SLC30A3Q99726 388 aa7.95□□□□□ -1.14
CASC4-207ENST00000559037 HECW1Q76N89 1606 aa7.95□□□□□ -1.14
CASC4-207ENST00000559037 MYO5CQ9NQX4 1742 aa7.95□□□□□ -1.14
CASC4-207ENST00000559037 ADGRL1O94910 1474 aa7.94□□□□□ -1.14
CASC4-207ENST00000559037 TTC37Q6PGP7 1564 aa7.94□□□□□ -1.14
CASC4-207ENST00000559037 SHISA8B8ZZ34 492 aa7.94□□□□□ -1.14
CASC4-207ENST00000559037 TNFRSF10BO14763 440 aa7.94□□□□□ -1.14
CASC4-207ENST00000559037 EGFRP00533 1210 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms