RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 DMRTB1Q96MA1 342 aa7.96□□□□□ -1.14
MTHFD1-206ENST00000554353 FAM129BQ96TA1 746 aa7.96□□□□□ -1.14
MTHFD1-206ENST00000554353 BCL2L13Q9BXK5 485 aa7.96□□□□□ -1.14
MTHFD1-206ENST00000554353 PCDHGC4Q9Y5F7 938 aa7.96□□□□□ -1.14
MTHFD1-206ENST00000554353 GRIN2BQ13224 1484 aa7.95□□□□□ -1.14
MTHFD1-206ENST00000554353 MAGI1Q96QZ7 1491 aaPredicted RBP7.95□□□□□ -1.14
MTHFD1-206ENST00000554353 UBAP1LF5GYI3 381 aa7.95□□□□□ -1.14
MTHFD1-206ENST00000554353 GPR182O15218 404 aa7.95□□□□□ -1.14
MTHFD1-206ENST00000554353 RPLP1P05386 114 aaKnown RBP7.95□□□□□ -1.14
MTHFD1-206ENST00000554353 PLCB3Q01970 1234 aa7.95□□□□□ -1.14
MTHFD1-206ENST00000554353 GTPBP3Q969Y2 492 aaKnown RBP7.95□□□□□ -1.14
MTHFD1-206ENST00000554353 NIF3L1Q9GZT8 377 aa7.95□□□□□ -1.14
MTHFD1-206ENST00000554353 FNDC3AQ9Y2H6 1198 aaKnown RBP7.95□□□□□ -1.14
MTHFD1-206ENST00000554353 AMOTL2Q9Y2J4 779 aa7.95□□□□□ -1.14
MTHFD1-206ENST00000554353 CLASP1Q7Z460 1538 aa7.94□□□□□ -1.14
MTHFD1-206ENST00000554353 SYNJ1O43426 1573 aa7.94□□□□□ -1.14
MTHFD1-206ENST00000554353 CDC14CA4D256 554 aa7.94□□□□□ -1.14
MTHFD1-206ENST00000554353 TREHO43280 583 aa7.94□□□□□ -1.14
MTHFD1-206ENST00000554353 MAPK8P45983 427 aa7.94□□□□□ -1.14
MTHFD1-206ENST00000554353 EHHADHQ08426 723 aa7.94□□□□□ -1.14
MTHFD1-206ENST00000554353 TRIP4Q15650 581 aaPredicted RBP7.94□□□□□ -1.14
MTHFD1-206ENST00000554353 GIPC2Q8TF65 315 aa7.94□□□□□ -1.14
MTHFD1-206ENST00000554353 ZNF837Q96EG3 531 aaPredicted RBP7.94□□□□□ -1.14
MTHFD1-206ENST00000554353 KCNMB2Q9Y691 235 aa7.94□□□□□ -1.14
MTHFD1-206ENST00000554353 P4HBP07237 508 aaKnown RBP7.93□□□□□ -1.14
MTHFD1-206ENST00000554353 FAM157BP0CG42 384 aa7.93□□□□□ -1.14
MTHFD1-206ENST00000554353 GRNP28799 593 aaKnown RBP7.93□□□□□ -1.14
MTHFD1-206ENST00000554353 SFSWAPQ12872 951 aaKnown RBP7.93□□□□□ -1.14
MTHFD1-206ENST00000554353 EAPPQ56P03 285 aaPredicted RBP7.93□□□□□ -1.14
MTHFD1-206ENST00000554353 ABHD17AQ96GS6 310 aa7.93□□□□□ -1.14
MTHFD1-206ENST00000554353 KCNH4Q9UQ05 1017 aa7.93□□□□□ -1.14
MTHFD1-206ENST00000554353 SYNJ2O15056 1496 aa7.93□□□□□ -1.14
MTHFD1-206ENST00000554353 GAPVD1Q14C86 1478 aa7.93□□□□□ -1.14
MTHFD1-206ENST00000554353 TERTO14746 1132 aaKnown RBP7.92□□□□□ -1.14
MTHFD1-206ENST00000554353 BNIP3LO60238 219 aa7.92□□□□□ -1.14
MTHFD1-206ENST00000554353 PPFIA3O75145 1194 aa7.92□□□□□ -1.14
MTHFD1-206ENST00000554353 XYLBO75191 536 aa7.92□□□□□ -1.14
MTHFD1-206ENST00000554353 IGHA2P01877 340 aa7.92□□□□□ -1.14
MTHFD1-206ENST00000554353 MAPTP10636 758 aaKnown RBP7.92□□□□□ -1.14
MTHFD1-206ENST00000554353 TNP2Q05952 138 aa7.92□□□□□ -1.14
MTHFD1-206ENST00000554353 UBAP2LQ14157 1087 aaKnown RBP7.92□□□□□ -1.14
MTHFD1-206ENST00000554353 DSC3Q14574 896 aa7.92□□□□□ -1.14
MTHFD1-206ENST00000554353 ZNF438Q7Z4V0 828 aa7.92□□□□□ -1.14
MTHFD1-206ENST00000554353 VWA5B2Q8N398 1253 aa7.92□□□□□ -1.14
MTHFD1-206ENST00000554353 GMCL1Q96IK5 515 aa7.92□□□□□ -1.14
MTHFD1-206ENST00000554353 STRN4Q9NRL3 753 aa7.92□□□□□ -1.14
MTHFD1-206ENST00000554353 GPR25O00155 361 aa7.91□□□□□ -1.14
MTHFD1-206ENST00000554353 VEGFBP49765 207 aa7.91□□□□□ -1.14
MTHFD1-206ENST00000554353 FOXR1Q6PIV2 292 aa7.91□□□□□ -1.14
MTHFD1-206ENST00000554353 KRT25Q7Z3Z0 450 aa7.91□□□□□ -1.14
MTHFD1-206ENST00000554353 ABCA5Q8WWZ7 1642 aa7.91□□□□□ -1.14
MTHFD1-206ENST00000554353 ABCA10Q8WWZ4 1543 aa7.9□□□□□ -1.14
MTHFD1-206ENST00000554353 RBM47A0AV96 593 aaKnown RBP7.9□□□□□ -1.14
MTHFD1-206ENST00000554353 EFSO43281 561 aa7.9□□□□□ -1.14
MTHFD1-206ENST00000554353 CD33P20138 364 aa7.9□□□□□ -1.14
MTHFD1-206ENST00000554353 TAGLNQ01995 201 aaKnown RBP7.9□□□□□ -1.14
MTHFD1-206ENST00000554353 FMR1Q06787 632 aaKnown RBP eCLIP7.9□□□□□ -1.14
MTHFD1-206ENST00000554353 ORC1Q13415 861 aa7.9□□□□□ -1.14
MTHFD1-206ENST00000554353 ZNF326Q5BKZ1 582 aaKnown RBP7.9□□□□□ -1.14
MTHFD1-206ENST00000554353 SV2AQ7L0J3 742 aa7.9□□□□□ -1.14
MTHFD1-206ENST00000554353 ALKBH8Q96BT7 664 aaKnown RBP7.9□□□□□ -1.14
MTHFD1-206ENST00000554353 TRERF1Q96PN7 1200 aa7.9□□□□□ -1.14
MTHFD1-206ENST00000554353 ELP3Q9H9T3 547 aa7.9□□□□□ -1.14
MTHFD1-206ENST00000554353 MARK1Q9P0L2 795 aa7.9□□□□□ -1.14
MTHFD1-206ENST00000554353 PNMA6FA0A0J9YX94 578 aa7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 LOC105371045A0A1W2PR82 267 aa7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 SASH3O75995 380 aa7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 NEFLP07196 543 aa7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 ZNF16P17020 682 aaPredicted RBP7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 KCNQ4P56696 695 aa7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 CCINQ13939 588 aa7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 GRIN2CQ14957 1233 aa7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 COL19A1Q14993 1142 aa7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 PDE12Q6L8Q7 609 aaKnown RBP7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 FBXO33Q7Z6M2 555 aa7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 PNMA5Q96PV4 448 aa7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 NDFIP2Q9NV92 336 aa7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 TMEM63CQ9P1W3 806 aa7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 NXF1Q9UBU9 619 aaKnown RBP7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 FOXD3Q9UJU5 478 aaPredicted RBP7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 ATXN7L1Q9ULK2 861 aaPredicted RBP7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 PHF24Q9UPV7 400 aa7.89□□□□□ -1.15
MTHFD1-206ENST00000554353 TNFRSF21O75509 655 aa7.88□□□□□ -1.15
MTHFD1-206ENST00000554353 LDHBP07195 334 aaKnown RBP7.88□□□□□ -1.15
MTHFD1-206ENST00000554353 ATP2B2Q01814 1243 aa7.88□□□□□ -1.15
MTHFD1-206ENST00000554353 LAMC2Q13753 1193 aa7.88□□□□□ -1.15
MTHFD1-206ENST00000554353 NLRP13Q86W25 1043 aa7.88□□□□□ -1.15
MTHFD1-206ENST00000554353 H3BM21 787 aa7.87□□□□□ -1.15
MTHFD1-206ENST00000554353 EIF5BO60841 1220 aaKnown RBP7.87□□□□□ -1.15
MTHFD1-206ENST00000554353 EGFRP00533 1210 aa7.87□□□□□ -1.15
MTHFD1-206ENST00000554353 FGFR3P22607 806 aa7.87□□□□□ -1.15
MTHFD1-206ENST00000554353 TARSP26639 723 aaKnown RBP7.87□□□□□ -1.15
MTHFD1-206ENST00000554353 SPEM2Q0P670 501 aa7.87□□□□□ -1.15
MTHFD1-206ENST00000554353 TTC39BQ5VTQ0 682 aaPredicted RBP7.87□□□□□ -1.15
MTHFD1-206ENST00000554353 XKR5Q6UX68 686 aa7.87□□□□□ -1.15
MTHFD1-206ENST00000554353 RAB44Q7Z6P3 723 aaPredicted RBP7.87□□□□□ -1.15
MTHFD1-206ENST00000554353 SNX29Q8TEQ0 813 aa7.87□□□□□ -1.15
MTHFD1-206ENST00000554353 CSRNP1Q96S65 589 aa7.87□□□□□ -1.15
MTHFD1-206ENST00000554353 SETDB2Q96T68 719 aa7.87□□□□□ -1.15
MTHFD1-206ENST00000554353 GSX2Q9BZM3 304 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms