RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 DBNDD2Q9BQY9 259 aa13.52□□□□□ -0.24
PTPN21-205ENST00000554270 PYCARDQ9ULZ3 195 aa13.52□□□□□ -0.24
PTPN21-205ENST00000554270 MTMR6Q9Y217 621 aa13.52□□□□□ -0.24
PTPN21-205ENST00000554270 HMGN5P82970 282 aaKnown RBP13.52□□□□□ -0.25
PTPN21-205ENST00000554270 POLA2Q14181 598 aa13.52□□□□□ -0.25
PTPN21-205ENST00000554270 TTC6Q86TZ1 520 aa13.52□□□□□ -0.25
PTPN21-205ENST00000554270 SLC27A2O14975 620 aa13.52□□□□□ -0.25
PTPN21-205ENST00000554270 ATF3P18847 181 aa13.52□□□□□ -0.25
PTPN21-205ENST00000554270 CCDC73Q6ZRK6 1079 aa13.52□□□□□ -0.25
PTPN21-205ENST00000554270 SYTL4Q96C24 671 aaPredicted RBP13.52□□□□□ -0.25
PTPN21-205ENST00000554270 DLG5Q8TDM6 1919 aa13.52□□□□□ -0.25
PTPN21-205ENST00000554270 SALL3Q9BXA9 1300 aa13.52□□□□□ -0.25
PTPN21-205ENST00000554270 BIN1O00499 593 aa13.51□□□□□ -0.25
PTPN21-205ENST00000554270 MCM5P33992 734 aa13.51□□□□□ -0.25
PTPN21-205ENST00000554270 TYRO3Q06418 890 aa13.51□□□□□ -0.25
PTPN21-205ENST00000554270 ZNF790Q6PG37 636 aa13.51□□□□□ -0.25
PTPN21-205ENST00000554270 PDCL2Q8N4E4 241 aa13.51□□□□□ -0.25
PTPN21-205ENST00000554270 ZNF594Q96JF6 807 aaPredicted RBP13.51□□□□□ -0.25
PTPN21-205ENST00000554270 TOMM22Q9NS69 142 aa13.51□□□□□ -0.25
PTPN21-205ENST00000554270 KNDC1Q76NI1 1749 aa13.51□□□□□ -0.25
PTPN21-205ENST00000554270 SH2B1Q9NRF2 756 aaPredicted RBP13.51□□□□□ -0.25
PTPN21-205ENST00000554270 NRBP1Q9UHY1 535 aa13.51□□□□□ -0.25
PTPN21-205ENST00000554270 APPP05067 770 aa13.5□□□□□ -0.25
PTPN21-205ENST00000554270 KDRP35968 1356 aa13.5□□□□□ -0.25
PTPN21-205ENST00000554270 DDX21Q9NR30 783 aaKnown RBP eCLIP13.5□□□□□ -0.25
PTPN21-205ENST00000554270 TTC41PQ6P2S7 1318 aa13.5□□□□□ -0.25
PTPN21-205ENST00000554270 Q6ZUG5 572 aa13.49□□□□□ -0.25
PTPN21-205ENST00000554270 NCOA5Q9HCD5 579 aaKnown RBP13.49□□□□□ -0.25
PTPN21-205ENST00000554270 CLIP2Q9UDT6 1046 aa13.49□□□□□ -0.25
PTPN21-205ENST00000554270 ADCY9O60503 1353 aa13.49□□□□□ -0.25
PTPN21-205ENST00000554270 KINO60870 393 aaKnown RBP13.49□□□□□ -0.25
PTPN21-205ENST00000554270 ALDH1L1O75891 902 aa13.49□□□□□ -0.25
PTPN21-205ENST00000554270 POLR3DP05423 398 aaPredicted RBP13.49□□□□□ -0.25
PTPN21-205ENST00000554270 ATP2B1P20020 1258 aa13.49□□□□□ -0.25
PTPN21-205ENST00000554270 FTOQ9C0B1 505 aaKnown RBP eCLIP13.49□□□□□ -0.25
PTPN21-205ENST00000554270 SMC2O95347 1197 aa13.49□□□□□ -0.25
PTPN21-205ENST00000554270 VPS53Q5VIR6 699 aa13.49□□□□□ -0.25
PTPN21-205ENST00000554270 TOM1L2Q6ZVM7 507 aa13.49□□□□□ -0.25
PTPN21-205ENST00000554270 ZNF771Q7L3S4 317 aaPredicted RBP13.49□□□□□ -0.25
PTPN21-205ENST00000554270 CPLX1O14810 134 aa13.48□□□□□ -0.25
PTPN21-205ENST00000554270 TNNT1P13805 278 aa13.48□□□□□ -0.25
PTPN21-205ENST00000554270 OTUD7BQ6GQQ9 843 aa13.48□□□□□ -0.25
PTPN21-205ENST00000554270 CREBRFQ8IUR6 639 aa13.48□□□□□ -0.25
PTPN21-205ENST00000554270 FAM177A1Q8N128 213 aaPredicted RBP13.48□□□□□ -0.25
PTPN21-205ENST00000554270 PIBF1Q8WXW3 757 aa13.48□□□□□ -0.25
PTPN21-205ENST00000554270 RIOK3O14730 519 aaKnown RBP13.48□□□□□ -0.25
PTPN21-205ENST00000554270 NEK1Q96PY6 1258 aa13.48□□□□□ -0.25
PTPN21-205ENST00000554270 IGKV5-2P06315 115 aa13.48□□□□□ -0.25
PTPN21-205ENST00000554270 HIP1O00291 1037 aa13.48□□□□□ -0.25
PTPN21-205ENST00000554270 GCKRQ14397 625 aa13.48□□□□□ -0.25
PTPN21-205ENST00000554270 UVSSAQ2YD98 709 aa13.48□□□□□ -0.25
PTPN21-205ENST00000554270 FAM200AQ8TCP9 573 aa13.48□□□□□ -0.25
PTPN21-205ENST00000554270 APOBRQ0VD83 1088 aa13.47□□□□□ -0.25
PTPN21-205ENST00000554270 HSP90AA4PQ58FG1 418 aa13.47□□□□□ -0.25
PTPN21-205ENST00000554270 TTC14Q96N46 770 aa13.47□□□□□ -0.25
PTPN21-205ENST00000554270 SCAND2PQ9GZW5 306 aaPredicted RBP13.47□□□□□ -0.25
PTPN21-205ENST00000554270 SPATA31D1Q6ZQQ2 1576 aa13.47□□□□□ -0.25
PTPN21-205ENST00000554270 NR1I2O75469 434 aa13.47□□□□□ -0.25
PTPN21-205ENST00000554270 A1BGP04217 495 aa13.47□□□□□ -0.25
PTPN21-205ENST00000554270 U2AF2P26368 475 aaKnown RBP eCLIP13.47□□□□□ -0.25
PTPN21-205ENST00000554270 HOMER1Q86YM7 354 aa13.47□□□□□ -0.25
PTPN21-205ENST00000554270 DBNLQ9UJU6 430 aaKnown RBP13.47□□□□□ -0.25
PTPN21-205ENST00000554270 ANKRD26Q9UPS8 1709 aa13.47□□□□□ -0.25
PTPN21-205ENST00000554270 NEURL1BA8MQ27 555 aa13.46□□□□□ -0.25
PTPN21-205ENST00000554270 ANKRD1Q15327 319 aa13.46□□□□□ -0.25
PTPN21-205ENST00000554270 ARHGEF25Q86VW2 580 aa13.46□□□□□ -0.25
PTPN21-205ENST00000554270 CCDC112Q8NEF3 446 aa13.46□□□□□ -0.25
PTPN21-205ENST00000554270 CBX8Q9HC52 389 aa13.46□□□□□ -0.25
PTPN21-205ENST00000554270 GPTP24298 496 aa13.46□□□□□ -0.25
PTPN21-205ENST00000554270 ZSWIM6Q9HCJ5 1215 aa13.46□□□□□ -0.25
PTPN21-205ENST00000554270 CCAR2Q8N163 923 aaKnown RBP13.45□□□□□ -0.26
PTPN21-205ENST00000554270 TMX1Q9H3N1 280 aa13.45□□□□□ -0.26
PTPN21-205ENST00000554270 RPAP1Q9BWH6 1393 aaPredicted RBP13.45□□□□□ -0.26
PTPN21-205ENST00000554270 AOX1Q06278 1338 aa13.45□□□□□ -0.26
PTPN21-205ENST00000554270 TECPR2O15040 1411 aa13.45□□□□□ -0.26
PTPN21-205ENST00000554270 EVA1CP58658 441 aa13.45□□□□□ -0.26
PTPN21-205ENST00000554270 STK38Q15208 465 aa13.45□□□□□ -0.26
PTPN21-205ENST00000554270 CCAR1Q8IX12 1150 aaKnown RBP13.45□□□□□ -0.26
PTPN21-205ENST00000554270 PRDM11Q9NQV5 511 aa13.45□□□□□ -0.26
PTPN21-205ENST00000554270 SNRPA1P09661 255 aaKnown RBP13.45□□□□□ -0.26
PTPN21-205ENST00000554270 IFNL2Q8IZJ0 200 aa13.45□□□□□ -0.26
PTPN21-205ENST00000554270 MYRIPQ8NFW9 859 aa13.45□□□□□ -0.26
PTPN21-205ENST00000554270 BCL2L12Q9HB09 334 aa13.45□□□□□ -0.26
PTPN21-205ENST00000554270 IFIT1P09914 478 aaKnown RBP13.44□□□□□ -0.26
PTPN21-205ENST00000554270 RPS6KB1P23443 525 aa13.44□□□□□ -0.26
PTPN21-205ENST00000554270 NAA30Q147X3 362 aaPredicted RBP13.44□□□□□ -0.26
PTPN21-205ENST00000554270 NECTIN1Q15223 517 aa13.44□□□□□ -0.26
PTPN21-205ENST00000554270 TNNI3KQ59H18 835 aa13.44□□□□□ -0.26
PTPN21-205ENST00000554270 MTERF4Q7Z6M4 381 aaKnown RBP13.44□□□□□ -0.26
PTPN21-205ENST00000554270 CCDC144CPQ8IYA2 1237 aa13.44□□□□□ -0.26
PTPN21-205ENST00000554270 CCDC82Q8N4S0 544 aa13.44□□□□□ -0.26
PTPN21-205ENST00000554270 KAZALD1Q96I82 304 aa13.44□□□□□ -0.26
PTPN21-205ENST00000554270 FPGT-TNNI3KV9GXZ4 949 aa13.44□□□□□ -0.26
PTPN21-205ENST00000554270 TTLL5Q6EMB2 1281 aa13.44□□□□□ -0.26
PTPN21-205ENST00000554270 FSIP1Q8NA03 581 aa13.44□□□□□ -0.26
PTPN21-205ENST00000554270 CHMP4CQ96CF2 233 aa13.44□□□□□ -0.26
PTPN21-205ENST00000554270 TTLL7Q6ZT98 887 aa13.44□□□□□ -0.26
PTPN21-205ENST00000554270 LEO1Q8WVC0 666 aaPredicted RBP13.44□□□□□ -0.26
PTPN21-205ENST00000554270 PDIA4P13667 645 aaKnown RBP13.43□□□□□ -0.26
PTPN21-205ENST00000554270 MAP4K1Q92918 833 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms