RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 CARD14Q9BXL6 1004 aa11.91□□□□□ -0.5
PRKCH-203ENST00000552875 PTPN22Q9Y2R2 807 aa11.91□□□□□ -0.5
PRKCH-203ENST00000552875 RPS12P25398 132 aaKnown RBP11.9□□□□□ -0.5
PRKCH-203ENST00000552875 KIAA2012Q0VF49 1180 aa11.9□□□□□ -0.5
PRKCH-203ENST00000552875 ZNF790Q6PG37 636 aa11.9□□□□□ -0.5
PRKCH-203ENST00000552875 DPP8Q6V1X1 898 aaPredicted RBP11.9□□□□□ -0.5
PRKCH-203ENST00000552875 RTFDC1Q9BY42 306 aaPredicted RBP11.9□□□□□ -0.5
PRKCH-203ENST00000552875 PRAMEF22A3QJZ6 481 aa11.89□□□□□ -0.51
PRKCH-203ENST00000552875 TEFQ10587 303 aa11.89□□□□□ -0.51
PRKCH-203ENST00000552875 TCIRG1Q13488 830 aa11.89□□□□□ -0.51
PRKCH-203ENST00000552875 RBM26Q5T8P6 1007 aaKnown RBP11.89□□□□□ -0.51
PRKCH-203ENST00000552875 PRDM6Q9NQX0 595 aa11.89□□□□□ -0.51
PRKCH-203ENST00000552875 ATP6V0A2Q9Y487 856 aa11.89□□□□□ -0.51
PRKCH-203ENST00000552875 ARHGEF6Q15052 776 aa11.88□□□□□ -0.51
PRKCH-203ENST00000552875 GGA3Q9NZ52 723 aa11.88□□□□□ -0.51
PRKCH-203ENST00000552875 STXBP5LQ9Y2K9 1186 aa11.88□□□□□ -0.51
PRKCH-203ENST00000552875 NR2E3Q9Y5X4 410 aa11.88□□□□□ -0.51
PRKCH-203ENST00000552875 RBBP6Q7Z6E9 1792 aaKnown RBP11.87□□□□□ -0.51
PRKCH-203ENST00000552875 SHTN1A0MZ66 631 aa11.87□□□□□ -0.51
PRKCH-203ENST00000552875 INHBEP58166 350 aa11.87□□□□□ -0.51
PRKCH-203ENST00000552875 KIF4BQ2VIQ3 1234 aa11.87□□□□□ -0.51
PRKCH-203ENST00000552875 GPR153Q6NV75 609 aa11.87□□□□□ -0.51
PRKCH-203ENST00000552875 EFCC1Q9HA90 598 aa11.87□□□□□ -0.51
PRKCH-203ENST00000552875 ZBTB12Q9Y330 459 aaPredicted RBP11.87□□□□□ -0.51
PRKCH-203ENST00000552875 PAPPA2Q9BXP8 1791 aa11.87□□□□□ -0.51
PRKCH-203ENST00000552875 RIC1Q4ADV7 1423 aa11.86□□□□□ -0.51
PRKCH-203ENST00000552875 TTLL12Q14166 644 aaPredicted RBP11.86□□□□□ -0.51
PRKCH-203ENST00000552875 SLC9C1Q4G0N8 1177 aa11.86□□□□□ -0.51
PRKCH-203ENST00000552875 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.86□□□□□ -0.51
PRKCH-203ENST00000552875 MPNDQ8N594 471 aa11.86□□□□□ -0.51
PRKCH-203ENST00000552875 ZNF333Q96JL9 665 aa11.86□□□□□ -0.51
PRKCH-203ENST00000552875 HTATIP2Q9BUP3 242 aa11.86□□□□□ -0.51
PRKCH-203ENST00000552875 NF2P35240 595 aa11.85□□□□□ -0.51
PRKCH-203ENST00000552875 TRIM26Q12899 539 aaPredicted RBP11.85□□□□□ -0.51
PRKCH-203ENST00000552875 NUTM1Q86Y26 1132 aa11.85□□□□□ -0.51
PRKCH-203ENST00000552875 ABCC12Q96J65 1359 aa11.84□□□□□ -0.51
PRKCH-203ENST00000552875 PSMD14O00487 310 aa11.84□□□□□ -0.51
PRKCH-203ENST00000552875 BBOX1O75936 387 aa11.84□□□□□ -0.51
PRKCH-203ENST00000552875 MKRN3Q13064 507 aaKnown RBP11.84□□□□□ -0.51
PRKCH-203ENST00000552875 MAPK8IP2Q13387 824 aaPredicted RBP11.84□□□□□ -0.51
PRKCH-203ENST00000552875 DEFB123Q8N688 67 aa11.84□□□□□ -0.51
PRKCH-203ENST00000552875 PRO3102Q9H379 93 aa11.84□□□□□ -0.51
PRKCH-203ENST00000552875 BRCA2P51587 3418 aa11.83□□□□□ -0.51
PRKCH-203ENST00000552875 HTTP42858 3142 aa11.83□□□□□ -0.52
PRKCH-203ENST00000552875 UBR2Q8IWV8 1755 aa11.83□□□□□ -0.52
PRKCH-203ENST00000552875 UBE2Q2LH0YL09 131 aa11.83□□□□□ -0.52
PRKCH-203ENST00000552875 EGFRP00533 1210 aa11.83□□□□□ -0.52
PRKCH-203ENST00000552875 OTUD7BQ6GQQ9 843 aa11.83□□□□□ -0.52
PRKCH-203ENST00000552875 SP8Q8IXZ3 490 aa11.83□□□□□ -0.52
PRKCH-203ENST00000552875 NLRP3Q96P20 1036 aa11.83□□□□□ -0.52
PRKCH-203ENST00000552875 R3HDMLQ9H3Y0 253 aa11.83□□□□□ -0.52
PRKCH-203ENST00000552875 RANBP2P49792 3224 aaKnown RBP11.83□□□□□ -0.52
PRKCH-203ENST00000552875 KIAA0100Q14667 2235 aaKnown RBP11.83□□□□□ -0.52
PRKCH-203ENST00000552875 CENPFP49454 3210 aa11.82□□□□□ -0.52
PRKCH-203ENST00000552875 MANSC4A6NHS7 340 aaPredicted RBP11.82□□□□□ -0.52
PRKCH-203ENST00000552875 YDJCA8MPS7 323 aa11.82□□□□□ -0.52
PRKCH-203ENST00000552875 ANGEL2Q5VTE6 544 aaKnown RBP11.82□□□□□ -0.52
PRKCH-203ENST00000552875 CD99L2Q8TCZ2 262 aa11.82□□□□□ -0.52
PRKCH-203ENST00000552875 NECTIN2Q92692 538 aa11.82□□□□□ -0.52
PRKCH-203ENST00000552875 LRCH3Q96II8 777 aa11.82□□□□□ -0.52
PRKCH-203ENST00000552875 IBTKQ9P2D0 1353 aaPredicted RBP11.81□□□□□ -0.52
PRKCH-203ENST00000552875 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
PRKCH-203ENST00000552875 MTHFSDQ2M296 383 aaKnown RBP11.81□□□□□ -0.52
PRKCH-203ENST00000552875 IFNL1Q8IU54 200 aa11.81□□□□□ -0.52
PRKCH-203ENST00000552875 CEP290O15078 2479 aa11.8□□□□□ -0.52
PRKCH-203ENST00000552875 ZNF609O15014 1411 aa11.8□□□□□ -0.52
PRKCH-203ENST00000552875 SOX1O00570 391 aaPredicted RBP11.8□□□□□ -0.52
PRKCH-203ENST00000552875 SNRPA1P09661 255 aaKnown RBP11.8□□□□□ -0.52
PRKCH-203ENST00000552875 COL9A1P20849 921 aa11.8□□□□□ -0.52
PRKCH-203ENST00000552875 SP3Q02447 781 aa11.8□□□□□ -0.52
PRKCH-203ENST00000552875 SCARF1Q14162 830 aa11.8□□□□□ -0.52
PRKCH-203ENST00000552875 WASHC4Q2M389 1173 aa11.8□□□□□ -0.52
PRKCH-203ENST00000552875 MOB2Q70IA6 237 aa11.8□□□□□ -0.52
PRKCH-203ENST00000552875 ARMC9Q7Z3E5 817 aa11.8□□□□□ -0.52
PRKCH-203ENST00000552875 NKX2-3Q8TAU0 364 aa11.8□□□□□ -0.52
PRKCH-203ENST00000552875 USP16Q9Y5T5 823 aa11.8□□□□□ -0.52
PRKCH-203ENST00000552875 BTBD11A6QL63 1104 aa11.79□□□□□ -0.52
PRKCH-203ENST00000552875 ERVV-1B6SEH8 477 aa11.79□□□□□ -0.52
PRKCH-203ENST00000552875 IL13P35225 146 aa11.79□□□□□ -0.52
PRKCH-203ENST00000552875 HLFQ16534 295 aa11.79□□□□□ -0.52
PRKCH-203ENST00000552875 TMC4Q7Z404 712 aa11.79□□□□□ -0.52
PRKCH-203ENST00000552875 SPRYD7Q5W111 196 aa11.78□□□□□ -0.52
PRKCH-203ENST00000552875 PPP1R42Q7Z4L9 355 aa11.78□□□□□ -0.52
PRKCH-203ENST00000552875 ABCC4O15439 1325 aa11.78□□□□□ -0.52
PRKCH-203ENST00000552875 UNC80Q8N2C7 3258 aa11.78□□□□□ -0.52
PRKCH-203ENST00000552875 WTIPA6NIX2 430 aaPredicted RBP11.77□□□□□ -0.53
PRKCH-203ENST00000552875 GNAT3A8MTJ3 354 aa11.77□□□□□ -0.53
PRKCH-203ENST00000552875 MYCP01106 439 aaPredicted RBP11.77□□□□□ -0.53
PRKCH-203ENST00000552875 KIF6Q6ZMV9 814 aa11.77□□□□□ -0.53
PRKCH-203ENST00000552875 SLC51AQ86UW1 340 aa11.77□□□□□ -0.53
PRKCH-203ENST00000552875 FAM122AQ96E09 287 aa11.77□□□□□ -0.53
PRKCH-203ENST00000552875 DBNDD1Q9H9R9 158 aa11.77□□□□□ -0.53
PRKCH-203ENST00000552875 ERBB4Q15303 1308 aa11.77□□□□□ -0.53
PRKCH-203ENST00000552875 ZBTB7BO15156 539 aaPredicted RBP11.76□□□□□ -0.53
PRKCH-203ENST00000552875 HMOX1P09601 288 aa11.76□□□□□ -0.53
PRKCH-203ENST00000552875 ZBTB48P10074 688 aaPredicted RBP11.76□□□□□ -0.53
PRKCH-203ENST00000552875 PLA2G5P39877 138 aa11.76□□□□□ -0.53
PRKCH-203ENST00000552875 DDX46Q7L014 1031 aaKnown RBP11.76□□□□□ -0.53
PRKCH-203ENST00000552875 EYA3Q99504 573 aa11.76□□□□□ -0.53
PRKCH-203ENST00000552875 MTMR10Q9NXD2 777 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms